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| author | Glenn Johnson <glenn-johnson@uiowa.edu> | 2020-02-13 19:47:37 -0600 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2020-02-13 19:47:37 -0600 |
| commit | 725336ee48422be487747c08e0dff58f23a3b7ad (patch) | |
| tree | 023e4b40b18b26f0bc54e6de6294da81d80bde1b /.codecov.yml | |
| parent | 0d0ab601503c238986a49e0c764639044b393cfe (diff) | |
| download | spack-725336ee48422be487747c08e0dff58f23a3b7ad.tar.gz spack-725336ee48422be487747c08e0dff58f23a3b7ad.tar.bz2 spack-725336ee48422be487747c08e0dff58f23a3b7ad.tar.xz spack-725336ee48422be487747c08e0dff58f23a3b7ad.zip | |
Update and fix the r-rhtslib package (#14863)
This PR adds an updated version to the r-rhtslib package as well as fix
the build.
- add patches to use compiler flags from R
- add variables for bzip2 and xz dependencies
- use the spack Makeconf file when building the in-tree htslib
- make patchelf available to allow R to remove reference to temporary
installation directory in htslib shared object
- Add new version of r-rsamtools as the r-rsamtools and r-rhtlib
packages are closely paired.
Diffstat (limited to '.codecov.yml')
0 files changed, 0 insertions, 0 deletions