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author | George Hartzell <hartzell@alerce.com> | 2019-01-07 09:30:59 -0800 |
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committer | Adam J. Stewart <ajstewart426@gmail.com> | 2019-01-07 11:30:59 -0600 |
commit | b984adb386e1feeeeb00b60ce69da58f583c7a73 (patch) | |
tree | df3b6c410cb1cf9a14a7037e5fb4498cd80c5a7e /.mailmap | |
parent | 3b59f707511d5cbd290567e404c65b1659a6a9dd (diff) | |
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bowtie: new versions and %gcc@8.0.0: fix (#10232)
* bowtie: new versions and %gcc@8.0.0: fix
Bowtie development shifted from Sourceforge to GitHub.
This commit adds several versions from GitHub, using the archive
tarballs. Note that the URL for 1.2.2 tarball is actually an '_p1'
tag....
It leaves the old 1.2 release download info in place.
Versions 1.2.0 and newer come from GitHub (I'm unsure if the 1.2 and
1.2.0 are equivalent).
Include a fix that enables %gcc@8.0.0: from:
https://github.com/BenLangmead/bowtie/issues/87
But, v1.2.2 has trouble with "newer" gcc's, so it only adds v1.2.2 for
%gcc@6.0.0:.
Feel free to tighten this. I know that:
- 1.2 -> 1.2.2 work with %gcc@5.5.0;
- 1.2 -> 1.2.1.1 work with %gcc@8.2.0; and
- 1.2.2 fails with %gcc@8.2.0
* Tighten to `conflicts('%gcc@8:', when='@1.2.2')`
* Point 1.2.2 and 1.2.2_p1 at the 1.2.2_p1 tarball
Diffstat (limited to '.mailmap')
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