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authorGeorge Hartzell <hartzell@alerce.com>2019-01-07 09:30:59 -0800
committerAdam J. Stewart <ajstewart426@gmail.com>2019-01-07 11:30:59 -0600
commitb984adb386e1feeeeb00b60ce69da58f583c7a73 (patch)
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bowtie: new versions and %gcc@8.0.0: fix (#10232)
* bowtie: new versions and %gcc@8.0.0: fix Bowtie development shifted from Sourceforge to GitHub. This commit adds several versions from GitHub, using the archive tarballs. Note that the URL for 1.2.2 tarball is actually an '_p1' tag.... It leaves the old 1.2 release download info in place. Versions 1.2.0 and newer come from GitHub (I'm unsure if the 1.2 and 1.2.0 are equivalent). Include a fix that enables %gcc@8.0.0: from: https://github.com/BenLangmead/bowtie/issues/87 But, v1.2.2 has trouble with "newer" gcc's, so it only adds v1.2.2 for %gcc@6.0.0:. Feel free to tighten this. I know that: - 1.2 -> 1.2.2 work with %gcc@5.5.0; - 1.2 -> 1.2.1.1 work with %gcc@8.2.0; and - 1.2.2 fails with %gcc@8.2.0 * Tighten to `conflicts('%gcc@8:', when='@1.2.2')` * Point 1.2.2 and 1.2.2_p1 at the 1.2.2_p1 tarball
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