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authorGregory Lee <lee218@llnl.gov>2016-07-20 21:14:34 -0700
committerGitHub <noreply@github.com>2016-07-20 21:14:34 -0700
commit07d4c6cf0b1d74db387bdb574ff165c5ba4a3197 (patch)
tree7243c7f9ea56d103165ac2bc53f2bf4761f075ee
parente389afedaaa1e617aa3d1cb161535f6105e1b574 (diff)
parentead1b93f75c3eddcf3f5c6b72ad4dc3ee6e34ee6 (diff)
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Merge pull request #1205 from glennpj/psxe
Setup environment for Intel Parallel Studio
-rw-r--r--lib/spack/spack/modules.py1
-rw-r--r--var/spack/repos/builtin/packages/intel-parallel-studio/package.py143
-rw-r--r--var/spack/repos/builtin/packages/intel/package.py47
3 files changed, 171 insertions, 20 deletions
diff --git a/lib/spack/spack/modules.py b/lib/spack/spack/modules.py
index 72656b8ae0..db8b20ae42 100644
--- a/lib/spack/spack/modules.py
+++ b/lib/spack/spack/modules.py
@@ -471,6 +471,7 @@ class Dotkit(EnvModule):
path = join_path(spack.share_path, 'dotkit')
environment_modifications_formats = {
PrependPath: 'dk_alter {name} {value}\n',
+ RemovePath: 'dk_unalter {name} {value}\n',
SetEnv: 'dk_setenv {name} {value}\n'
}
diff --git a/var/spack/repos/builtin/packages/intel-parallel-studio/package.py b/var/spack/repos/builtin/packages/intel-parallel-studio/package.py
index 493ca16417..fb98b2473c 100644
--- a/var/spack/repos/builtin/packages/intel-parallel-studio/package.py
+++ b/var/spack/repos/builtin/packages/intel-parallel-studio/package.py
@@ -42,15 +42,27 @@ class IntelParallelStudio(IntelInstaller):
variant('daal',
default=True, description="Install the Intel DAAL libraries")
variant('ipp', default=True, description="Install the Intel IPP libraries")
- variant('tools', default=True, description="""Install the Intel Advisor,\
-VTune Amplifier, and Inspector tools""")
+ variant('tools', default=True, description="Install the Intel Advisor, "
+ "VTune Amplifier, and Inspector tools")
provides('mpi', when='@cluster:+mpi')
provides('mkl', when='+mkl')
provides('daal', when='+daal')
provides('ipp', when='+ipp')
+ def check_variants(self, spec):
+ error_message = '\t{variant} can not be turned off if "+all" is set'
+
+ if self.spec.satisfies('+all'):
+ errors = [error_message.format(variant=x)
+ for x in ('mpi', 'mkl', 'daal', 'ipp', 'tools')
+ if ('~' + x) in self.spec]
+ if errors:
+ errors = ['incompatible variants given'] + errors
+ raise InstallError('\n'.join(errors))
+
def install(self, spec, prefix):
+ self.check_variants(spec)
base_components = "ALL" # when in doubt, install everything
mpi_components = ""
@@ -58,9 +70,7 @@ VTune Amplifier, and Inspector tools""")
daal_components = ""
ipp_components = ""
- if spec.satisfies('+all'):
- base_components = "ALL"
- else:
+ if not spec.satisfies('+all'):
all_components = get_all_components()
regex = '(comp|openmp|intel-tbb|icc|ifort|psxe|icsxe-pset)'
base_components = \
@@ -77,10 +87,10 @@ VTune Amplifier, and Inspector tools""")
regex = '(gdb|vtune|inspector|advisor)'
tool_components = \
filter_pick(all_components, re.compile(regex).search)
+ components = base_components
- components = base_components
if not spec.satisfies('+all'):
- if spec.satisfies('+mpi') and 'cluster' in str(spec.version):
+ if spec.satisfies('+mpi'):
components += mpi_components
if spec.satisfies('+mkl'):
components += mkl_components
@@ -92,7 +102,10 @@ VTune Amplifier, and Inspector tools""")
spec.satisfies('@professional')):
components += tool_components
- self.intel_components = ';'.join(components)
+ if spec.satisfies('+all'):
+ self.intel_components = 'ALL'
+ else:
+ self.intel_components = ';'.join(components)
IntelInstaller.install(self, spec, prefix)
absbindir = os.path.dirname(os.path.realpath(os.path.join(
@@ -116,8 +129,11 @@ VTune Amplifier, and Inspector tools""")
if (spec.satisfies('+all') or spec.satisfies('+mpi')) and \
spec.satisfies('@cluster'):
- os.symlink(self.global_license_file, os.path.join(
- self.prefix, "itac_latest", "license.lic"))
+ for ifile in os.listdir(os.path.join(self.prefix, "itac")):
+ if os.path.isdir(os.path.join(self.prefix, "itac", ifile)):
+ os.symlink(self.global_license_file,
+ os.path.join(self.prefix, "itac", ifile,
+ "license.lic"))
if spec.satisfies('~newdtags'):
wrappers = ["mpif77", "mpif77", "mpif90", "mpif90",
"mpigcc", "mpigcc", "mpigxx", "mpigxx",
@@ -142,3 +158,110 @@ VTune Amplifier, and Inspector tools""")
os.symlink(os.path.join(self.prefix.man, "common", "man1"),
os.path.join(self.prefix.man, "man1"))
+
+ def setup_environment(self, spack_env, run_env):
+ # TODO: Determine variables needed for the professional edition.
+
+ major_ver = self.version[1]
+
+ # Remove paths that were guessed but are incorrect for this package.
+ run_env.remove_path('LIBRARY_PATH',
+ join_path(self.prefix, 'lib'))
+ run_env.remove_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'lib'))
+ run_env.remove_path('CPATH',
+ join_path(self.prefix, 'include'))
+
+ # Add the default set of variables
+ run_env.prepend_path('LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'intel64'))
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'intel64'))
+ run_env.prepend_path('LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib',
+ 'intel64', 'gcc4.4'))
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib',
+ 'intel64', 'gcc4.4'))
+ run_env.prepend_path('CPATH',
+ join_path(self.prefix, 'tbb', 'include'))
+ run_env.prepend_path('MIC_LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'mic'))
+ run_env.prepend_path('MIC_LD_LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'mic'))
+ run_env.prepend_path('MIC_LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib', 'mic'))
+ run_env.prepend_path('MIC_LD_LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib', 'mic'))
+
+ if self.spec.satisfies('+all'):
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix,
+ 'debugger_{0}'.format(major_ver),
+ 'libipt', 'intel64', 'lib'))
+ run_env.set('GDBSERVER_MIC',
+ join_path(self.prefix,
+ 'debugger_{0}'.format(major_ver), 'gdb',
+ 'targets', 'mic', 'bin', 'gdbserver'))
+ run_env.set('GDB_CROSS',
+ join_path(self.prefix,
+ 'debugger_{0}'.format(major_ver),
+ 'gdb', 'intel64_mic', 'bin', 'gdb-mic'))
+ run_env.set('MPM_LAUNCHER',
+ join_path(self.prefix,
+ 'debugger_{0}'.format(major_ver), 'mpm',
+ 'mic',
+ 'bin', 'start_mpm.sh'))
+ run_env.set('INTEL_PYTHONHOME',
+ join_path(self.prefix,
+ 'debugger_{0}'.format(major_ver), 'python',
+ 'intel64'))
+
+ if (self.spec.satisfies('+all') or self.spec.satisfies('+mpi')):
+ # Only I_MPI_ROOT is set here because setting the various PATH
+ # variables will potentially be in conflict with other MPI
+ # environment modules. The I_MPI_ROOT environment variable can be
+ # used as a base to set necessary PATH variables for using Intel
+ # MPI. It is also possible to set the variables in the modules.yaml
+ # file if Intel MPI is the dominant, or only, MPI on a system.
+ run_env.set('I_MPI_ROOT', join_path(self.prefix, 'impi'))
+
+ if self.spec.satisfies('+all') or self.spec.satisfies('+mkl'):
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'mkl', 'lib',
+ 'intel64'))
+ run_env.prepend_path('LIBRARY_PATH',
+ join_path(self.prefix, 'mkl', 'lib',
+ 'intel64'))
+ run_env.prepend_path('CPATH',
+ join_path(self.prefix, 'mkl', 'include'))
+ run_env.prepend_path('MIC_LD_LIBRARY_PATH',
+ join_path(self.prefix, 'mkl', 'lib', 'mic'))
+ run_env.set('MKLROOT', join_path(self.prefix, 'mkl'))
+
+ if self.spec.satisfies('+all') or self.spec.satisfies('+daal'):
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'daal', 'lib',
+ 'intel64_lin'))
+ run_env.prepend_path('LIBRARY_PATH',
+ join_path(self.prefix, 'daal', 'lib',
+ 'intel64_lin'))
+ run_env.prepend_path('CPATH',
+ join_path(self.prefix, 'daal', 'include'))
+ run_env.prepend_path('CLASSPATH',
+ join_path(self.prefix, 'daal', 'lib',
+ 'daal.jar'))
+ run_env.set('DAALROOT', join_path(self.prefix, 'daal'))
+
+ if self.spec.satisfies('+all') or self.spec.satisfies('+ipp'):
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'ipp', 'lib',
+ 'intel64'))
+ run_env.prepend_path('LIBRARY_PATH',
+ join_path(self.prefix, 'ipp', 'lib',
+ 'intel64'))
+ run_env.prepend_path('CPATH',
+ join_path(self.prefix, 'ipp', 'include'))
+ run_env.prepend_path('MIC_LD_LIBRARY_PATH',
+ join_path(self.prefix, 'ipp', 'lib', 'mic'))
+ run_env.set('IPPROOT', join_path(self.prefix, 'ipp'))
diff --git a/var/spack/repos/builtin/packages/intel/package.py b/var/spack/repos/builtin/packages/intel/package.py
index 56d9fabddf..d171411946 100644
--- a/var/spack/repos/builtin/packages/intel/package.py
+++ b/var/spack/repos/builtin/packages/intel/package.py
@@ -49,13 +49,6 @@ class IntelInstaller(Package):
def install(self, spec, prefix):
- # Remove the installation DB, otherwise it will try to install into
- # location of other Intel builds
- if os.path.exists(os.path.join(os.environ["HOME"], "intel",
- "intel_sdp_products.db")):
- os.remove(os.path.join(os.environ["HOME"], "intel",
- "intel_sdp_products.db"))
-
if not hasattr(self, "intel_prefix"):
self.intel_prefix = self.prefix
@@ -66,12 +59,14 @@ ACCEPT_EULA=accept
PSET_MODE=install
CONTINUE_WITH_INSTALLDIR_OVERWRITE=yes
PSET_INSTALL_DIR=%s
+NONRPM_DB_DIR=%s
ACTIVATION_LICENSE_FILE=%s
ACTIVATION_TYPE=license_file
PHONEHOME_SEND_USAGE_DATA=no
CONTINUE_WITH_OPTIONAL_ERROR=yes
COMPONENTS=%s
-""" % (self.intel_prefix, self.global_license_file, self.intel_components))
+""" % (self.intel_prefix, self.intel_prefix, self.global_license_file,
+ self.intel_components))
install_script = Executable("./install.sh")
install_script('--silent', silent_config_filename)
@@ -111,8 +106,8 @@ class Intel(IntelInstaller):
self.prefix.lib, "intel64", "libimf.a")))[0]
# symlink or copy?
- os.symlink(self.global_license_file, os.path.join(absbindir,
- "license.lic"))
+ os.symlink(self.global_license_file,
+ os.path.join(absbindir, "license.lic"))
if spec.satisfies('+rpath'):
for compiler_command in ["icc", "icpc", "ifort"]:
@@ -123,3 +118,35 @@ class Intel(IntelInstaller):
os.symlink(os.path.join(self.prefix.man, "common", "man1"),
os.path.join(self.prefix.man, "man1"))
+
+ def setup_environment(self, spack_env, run_env):
+
+ # Remove paths that were guessed but are incorrect for this package.
+ run_env.remove_path('LIBRARY_PATH',
+ join_path(self.prefix, 'lib'))
+ run_env.remove_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'lib'))
+ run_env.remove_path('CPATH',
+ join_path(self.prefix, 'include'))
+
+ # Add the default set of variables
+ run_env.prepend_path('LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'intel64'))
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'intel64'))
+ run_env.prepend_path('LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib',
+ 'intel64', 'gcc4.4'))
+ run_env.prepend_path('LD_LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib',
+ 'intel64', 'gcc4.4'))
+ run_env.prepend_path('CPATH',
+ join_path(self.prefix, 'tbb', 'include'))
+ run_env.prepend_path('MIC_LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'mic'))
+ run_env.prepend_path('MIC_LD_LIBRARY_PATH',
+ join_path(self.prefix, 'lib', 'mic'))
+ run_env.prepend_path('MIC_LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib', 'mic'))
+ run_env.prepend_path('MIC_LD_LIBRARY_PATH',
+ join_path(self.prefix, 'tbb', 'lib', 'mic'))