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authorlingnanyuan <1297162327@qq.com>2018-02-14 01:35:16 -0600
committerMassimiliano Culpo <massimiliano.culpo@gmail.com>2018-02-14 08:35:16 +0100
commit8c921e946c85e4783ef57757e5b2c6ceb3bca9f9 (patch)
tree2a7480381d898ec4fcfa9d0963b81776d06a65f5
parent9ea9a4063a441e7a07043aabb24fadcf036359a9 (diff)
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r-jaspar2018: Create new package. (#7221)
-rw-r--r--var/spack/repos/builtin/packages/r-jaspar2018/package.py37
1 files changed, 37 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-jaspar2018/package.py b/var/spack/repos/builtin/packages/r-jaspar2018/package.py
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+++ b/var/spack/repos/builtin/packages/r-jaspar2018/package.py
@@ -0,0 +1,37 @@
+##############################################################################
+# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/spack/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RJaspar2018(RPackage):
+ """Data package for JASPAR 2018. To search this databases,
+ please use the package TFBSTools (>= 1.15.6)."""
+
+ homepage = "http://jaspar.genereg.net/"
+ url = "https://git.bioconductor.org/packages/JASPAR2018"
+
+ version('1.0.0', git='https://git.bioconductor.org/packages/JASPAR2018', commit='4c84092b3737bb1c57ab56f4321f2f5e4b0efeaa')
+
+ depends_on('r@3.4.0:')