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authorTodd Gamblin <tgamblin@llnl.gov>2017-01-07 09:03:50 -0800
committerGitHub <noreply@github.com>2017-01-07 09:03:50 -0800
commitf379697985f0b09a3856e12fff3cf69972a31cc1 (patch)
tree5c44e5e99727c4cc92d87c947c4713489270d2ac
parente39ba88e9c2f4c9409771982e0b12e25d97c359a (diff)
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Fix issues linking hDF5 1.8.14 and below on Ubuntu. (#2772)
-rw-r--r--var/spack/repos/builtin/packages/hdf5/package.py16
1 files changed, 15 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/hdf5/package.py b/var/spack/repos/builtin/packages/hdf5/package.py
index ef61b312fe..222af53601 100644
--- a/var/spack/repos/builtin/packages/hdf5/package.py
+++ b/var/spack/repos/builtin/packages/hdf5/package.py
@@ -22,7 +22,6 @@
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
-
from spack import *
import shutil
@@ -48,6 +47,7 @@ class Hdf5(AutotoolsPackage):
version('1.8.17', '7d572f8f3b798a628b8245af0391a0ca')
version('1.8.16', 'b8ed9a36ae142317f88b0c7ef4b9c618')
version('1.8.15', '03cccb5b33dbe975fdcd8ae9dc021f24')
+ version('1.8.14', 'a482686e733514a51cde12d6fe5c5d95')
version('1.8.13', 'c03426e9e77d7766944654280b467289')
version('1.8.12', 'd804802feb99b87fc668a90e6fa34411')
@@ -156,6 +156,20 @@ class Hdf5(AutotoolsPackage):
return ["--with-zlib=%s" % spec['zlib'].prefix] + extra_args
+ def configure(self, spec, prefix):
+ # Run the default autotools package configure
+ super(Hdf5, self).configure(spec, prefix)
+
+ if '@:1.8.14' in spec:
+ # On Ubuntu14, HDF5 1.8.12 (and maybe other versions)
+ # mysteriously end up with "-l -l" in the postdeps in the
+ # libtool script. Patch this by removing the spurious -l's.
+ filter_file(
+ r'postdeps="([^"]*)"',
+ lambda m: 'postdeps="%s"' % ' '.join(
+ arg for arg in m.group(1).split(' ') if arg != '-l'),
+ 'libtool')
+
@AutotoolsPackage.sanity_check('install')
def check_install(self):
# Build and run a small program to test the installed HDF5 library