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| author | dunatotatos <contact@dunatotatos.com> | 2022-08-05 14:31:41 +0200 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2022-08-05 14:31:41 +0200 |
| commit | 235f27a81542b85a7cd4bb3e8fd50b833b82a7e5 (patch) | |
| tree | aba114b4d99e42538719c792813ffe31cbd32003 | |
| parent | 5bf6b7e6a5f52429011ca16e0275848c27df4c9b (diff) | |
| download | spack-235f27a81542b85a7cd4bb3e8fd50b833b82a7e5.tar.gz spack-235f27a81542b85a7cd4bb3e8fd50b833b82a7e5.tar.bz2 spack-235f27a81542b85a7cd4bb3e8fd50b833b82a7e5.tar.xz spack-235f27a81542b85a7cd4bb3e8fd50b833b82a7e5.zip | |
krakenuniq: add new package. (#31944)
| -rw-r--r-- | var/spack/repos/builtin/packages/krakenuniq/package.py | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/krakenuniq/package.py b/var/spack/repos/builtin/packages/krakenuniq/package.py new file mode 100644 index 0000000000..a191ce128b --- /dev/null +++ b/var/spack/repos/builtin/packages/krakenuniq/package.py @@ -0,0 +1,30 @@ +# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Krakenuniq(Package): + """Metagenomics classifier with unique k-mer counting for more specific results.""" + + homepage = "https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1568-0" + url = "https://github.com/fbreitwieser/krakenuniq/archive/refs/tags/v0.7.3.tar.gz" + + version("0.7.3", sha256="140dccbabec00153c8231ac3c92eb8aecc0277c8947055d4d41abe949ae658c3") + version("0.7.2", sha256="e6b4c04dbe8276c44fa9e2613cca78429439d75d59e22303094e6577ba333627") + version("0.7.1", sha256="7f3da1efa1377f8615ad3587c4028fa462e7d802fa3f676b9c4e05d15215fad4") + version("0.6", sha256="8b058bd36a584ea7318fc19cd858cd55bde7fd4434ef5d37f2da6f28cb5ce036") + version("0.5.8", sha256="f6363683c826c6d39ac5e43efdc8316328783a9cb4d29995520e9ca6913621ed") + version("0.5.7", sha256="58a6d615f7d2f30e8a3e3e95b84a1331e8994572b34b46bd32f032407b0b8246") + version("0.5.6", sha256="57eeab0ed2f408126318533150e4b70028c6e6787c483ba4ed29f1433c6e6e0a") + version("0.5.5", sha256="645f4387a59638526dededacd5104abc1b325c020d5e4c136b902f1167fc4fd5") + version("0.5.3", sha256="bc57fd4d5f50363aef640d61b2b111d9bef84a32e9a4eebfb977812cb8dc0250") + + depends_on("bzip2") + depends_on("zlib") + + def install(self, spec, prefix): + local_script = which("./install_krakenuniq.sh") + local_script(prefix.bin) |