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| author | Yifan Zhu <ifanzhu@foxmail.com> | 2017-10-27 01:09:31 -0500 |
|---|---|---|
| committer | Massimiliano Culpo <massimiliano.culpo@googlemail.com> | 2017-10-27 08:09:31 +0200 |
| commit | 3849401d855d98a454c303b0dc7f222314f1c80d (patch) | |
| tree | 5b429a3732905b61e5a0490eed148c7680d76c9d | |
| parent | 0c2a691b1bc3c664b7518b1d19002a10e7d80f78 (diff) | |
| download | spack-3849401d855d98a454c303b0dc7f222314f1c80d.tar.gz spack-3849401d855d98a454c303b0dc7f222314f1c80d.tar.bz2 spack-3849401d855d98a454c303b0dc7f222314f1c80d.tar.xz spack-3849401d855d98a454c303b0dc7f222314f1c80d.zip | |
r-annotationfilter: created new package (#5995)
| -rw-r--r-- | var/spack/repos/builtin/packages/r-annotationfilter/package.py | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-annotationfilter/package.py b/var/spack/repos/builtin/packages/r-annotationfilter/package.py new file mode 100644 index 0000000000..f3b2792599 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-annotationfilter/package.py @@ -0,0 +1,42 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RAnnotationfilter(RPackage): + """This package provides class and other infrastructure to implement + filters for manipulating Bioconductor annotation resources. The + filters will be used by ensembldb, Organism.dplyr, and other + packages.""" + + homepage = "https://bioconductor.org/packages/AnnotationFilter/" + url = "https://git.bioconductor.org/packages/AnnotationFilter" + list_url = homepage + + version('1.0.0', git='https://git.bioconductor.org/packages/AnnotationFilter', commit='a9f79b26defe3021eea60abe16ce1fa379813ec9') + + depends_on('r-genomicranges', type=('build', 'run')) + depends_on('r-lazyeval', type=('build', 'run')) + depends_on('r@3.4.0:3.4.9', when='@1.0.0') |