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| author | Ricardo Silva <ricardo.d.silva@gmail.com> | 2019-01-26 16:21:04 +0100 |
|---|---|---|
| committer | Axel Huebl <axel.huebl@plasma.ninja> | 2019-01-26 16:21:04 +0100 |
| commit | 3fc8203b93c506bee105c18fdfcde73c44e81316 (patch) | |
| tree | ed8610264b3ffdad78f9d110274fdf898921f3dc | |
| parent | e867319ac3f74a322e1fcfb38ae3a0bb2944e488 (diff) | |
| download | spack-3fc8203b93c506bee105c18fdfcde73c44e81316.tar.gz spack-3fc8203b93c506bee105c18fdfcde73c44e81316.tar.bz2 spack-3fc8203b93c506bee105c18fdfcde73c44e81316.tar.xz spack-3fc8203b93c506bee105c18fdfcde73c44e81316.zip | |
bcftools: do not use bundled htslib (#10445)
* if the path to htslib is not specified the bundled one is built instead
* additionally this fixes the build with the intel compiler
| -rw-r--r-- | var/spack/repos/builtin/packages/bcftools/package.py | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/bcftools/package.py b/var/spack/repos/builtin/packages/bcftools/package.py index daaa383e38..34182f930d 100644 --- a/var/spack/repos/builtin/packages/bcftools/package.py +++ b/var/spack/repos/builtin/packages/bcftools/package.py @@ -32,3 +32,9 @@ class Bcftools(AutotoolsPackage): depends_on('htslib@1.4', when='@1.4') depends_on('htslib@1.3.1', when='@1.3.1') depends_on('htslib@1.2', when='@1.2') + + def configure_args(self): + args = [] + args.append('--with-htslib={0}'.format(self.spec['htslib'].prefix)) + + return args |