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authorlingnanyuan <1297162327@qq.com>2017-10-06 21:13:57 -0500
committerChristoph Junghans <christoph.junghans@gmail.com>2017-10-06 20:13:57 -0600
commit73bb34ad6e481f5ebcc3623d7f63af87986d3cc7 (patch)
tree3fd35ea3a4f8f3b994b0c04073a63131a1dd1193
parenta755c47fb13db8b6259a78b77e6db23157a00769 (diff)
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r-affycomp: Create new package. (#5642)
-rw-r--r--var/spack/repos/builtin/packages/r-affycomp/package.py37
1 files changed, 37 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-affycomp/package.py b/var/spack/repos/builtin/packages/r-affycomp/package.py
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+++ b/var/spack/repos/builtin/packages/r-affycomp/package.py
@@ -0,0 +1,37 @@
+##############################################################################
+# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RAffycomp(RPackage):
+ """The package contains functions that can be used to compare
+ expression measures for Affymetrix Oligonucleotide Arrays."""
+
+ homepage = "https://www.bioconductor.org/packages/affycomp/"
+ url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/affycomp_1.52.0.tar.gz"
+
+ version('1.52.0', 'efa67e67701f2083fadbed99bf7d60b9')
+
+ depends_on('r-biobase', type=('build', 'run'))