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| author | Glenn Johnson <glenn-johnson@uiowa.edu> | 2019-06-24 16:56:51 -0500 |
|---|---|---|
| committer | Elizabeth Fischer <elizabeth.fischer@columbia.edu> | 2019-06-24 17:56:51 -0400 |
| commit | c575cc46db50f5c71f1bc025d3dcbd6152442eee (patch) | |
| tree | 3a7cd3020115ca09117fd0649c57972f73c5ce80 | |
| parent | 1ec3d78441c6150eb2c634394d3c4951f9202509 (diff) | |
| download | spack-c575cc46db50f5c71f1bc025d3dcbd6152442eee.tar.gz spack-c575cc46db50f5c71f1bc025d3dcbd6152442eee.tar.bz2 spack-c575cc46db50f5c71f1bc025d3dcbd6152442eee.tar.xz spack-c575cc46db50f5c71f1bc025d3dcbd6152442eee.zip | |
The py-pytables package depends on hdf5-blosc (#11823)
* The py-pytables package depends on hdf5-blosc
* Further modifications to py-pytables package
The 3.2.2 version of py-pytables should still build with internal blosc.
The issue with locking in a multithreaded environment has been
fixed/worked around in version 3.3.
Also, add bzip2 and lzo variants.
| -rw-r--r-- | var/spack/repos/builtin/packages/py-pytables/package.py | 16 |
1 files changed, 16 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-pytables/package.py b/var/spack/repos/builtin/packages/py-pytables/package.py index eeba923aaa..30f526e625 100644 --- a/var/spack/repos/builtin/packages/py-pytables/package.py +++ b/var/spack/repos/builtin/packages/py-pytables/package.py @@ -17,6 +17,16 @@ class PyPytables(PythonPackage): version('3.2.2', '7cbb0972e4d6580f629996a5bed92441', url='https://github.com/PyTables/PyTables/archive/v.3.2.2.tar.gz') + variant('bzip2', default=False, description='Support for bzip2 compression') + variant('lzo', default=False, description='Support for lzo compression') + + depends_on('bzip2', when='+bzip2') + depends_on('lzo', when='+lzo') + + # Versions prior to 3.3 must build with the internal blosc due to a lock + # problem in a multithreaded environment. + depends_on('hdf5-blosc', when="@3.3.0:") + depends_on('hdf5@1.8.0:1.8.999', when="@:3.3.99") depends_on('hdf5@1.8.0:1.10.999', when="@3.4.0:") depends_on('py-numpy@1.8.0:', type=('build', 'run')) @@ -27,3 +37,9 @@ class PyPytables(PythonPackage): def setup_environment(self, spack_env, run_env): spack_env.set('HDF5_DIR', self.spec['hdf5'].prefix) + if '+bzip2' in self.spec: + spack_env.set('BZIP2_DIR', self.spec['bzip2'].prefix) + if '+lzo' in self.spec: + spack_env.set('LZO_DIR', self.spec['lzo'].prefix) + if '+hdf5-blosc' in self.spec: + spack_env.set('BLOSC_DIR', self.spec['c-blosc'].prefix) |