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| author | George Hartzell <hartzell@alerce.com> | 2017-05-23 13:37:24 -0700 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2017-05-23 15:37:24 -0500 |
| commit | 39ac8abbbd1bae825e24b0f399f7a1371509b04c (patch) | |
| tree | 07f4e7d282a2dab0253ac3580c17a219a5b0cb71 | |
| parent | d38e601134fd251b3ef7229ed8f384526f1b165f (diff) | |
| download | spack-39ac8abbbd1bae825e24b0f399f7a1371509b04c.tar.gz spack-39ac8abbbd1bae825e24b0f399f7a1371509b04c.tar.bz2 spack-39ac8abbbd1bae825e24b0f399f7a1371509b04c.tar.xz spack-39ac8abbbd1bae825e24b0f399f7a1371509b04c.zip | |
Add support for addl versions of bcl2fastq2 (#4328)
Two changes:
- It seems that Illumina version numbers are dotted and that the
dashed version in the 2.18... filename is an anomaly (based on the
names for 2.17.1.14 and 2.19.0). `url_for_version` does the right
thing for 2.18. It will need to be fixed when support for 2.19 is
added. 2.17 is no longer generally available so it gets a pass.
- Add version and hash for 2.17.1.14.
2.17.1.14 is no longer distributed. If you have a copy of the
source tarball, you can drop it into a local mirror w/ the name
mirror/bcl2fastq2/bcl2fastq2-2.17.1.14.zip and go from there.
| -rw-r--r-- | var/spack/repos/builtin/packages/bcl2fastq2/package.py | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/bcl2fastq2/package.py b/var/spack/repos/builtin/packages/bcl2fastq2/package.py index 98799a1444..2aff74b8a8 100644 --- a/var/spack/repos/builtin/packages/bcl2fastq2/package.py +++ b/var/spack/repos/builtin/packages/bcl2fastq2/package.py @@ -39,7 +39,11 @@ class Bcl2fastq2(Package): homepage = "https://support.illumina.com/downloads/bcl2fastq-conversion-software-v2-18.html" url = "https://support.illumina.com/content/dam/illumina-support/documents/downloads/software/bcl2fastq/bcl2fastq2-v2-18-0-12-tar.zip" - version('2-18-0-12', 'fbe06492117f65609c41be0c27e3215c') + version('2.18.0.12', 'fbe06492117f65609c41be0c27e3215c') + # 2.17.1.14 is no longer distributed. If you have a copy of the + # source tarball, you can drop it into a local mirror w/ the name + # mirror/bcl2fastq2/bcl2fastq2-2.17.1.14.zip and go from there. + version('2.17.1.14', '7426226c6db095862e636b95c38608d3') depends_on('boost@1.54.0') depends_on('cmake@2.8.9:') |