diff options
| author | Audrey Thoma <las_thoma15@iastate.edu> | 2017-08-17 07:49:57 -0500 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2017-08-17 07:49:57 -0500 |
| commit | 3bb7767839290a7cab2554c14c3bd22b37a435f6 (patch) | |
| tree | 4e27f11360c7ca529faa935504330ee6d49eb35b | |
| parent | d65d1269b925ae5bb8bcfa7cf8acedb28b95cd51 (diff) | |
| download | spack-3bb7767839290a7cab2554c14c3bd22b37a435f6.tar.gz spack-3bb7767839290a7cab2554c14c3bd22b37a435f6.tar.bz2 spack-3bb7767839290a7cab2554c14c3bd22b37a435f6.tar.xz spack-3bb7767839290a7cab2554c14c3bd22b37a435f6.zip | |
py-faststructure: new package (#5131)
| -rw-r--r-- | var/spack/repos/builtin/packages/py-faststructure/package.py | 39 |
1 files changed, 39 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-faststructure/package.py b/var/spack/repos/builtin/packages/py-faststructure/package.py new file mode 100644 index 0000000000..5085c33af0 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-faststructure/package.py @@ -0,0 +1,39 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class PyFaststructure(PythonPackage): + """FastStructure is a fast algorithm for inferring population structure + from large SNP genotype data.""" + + homepage = "https://github.com/rajanil/fastStructure" + url = "https://github.com/rajanil/fastStructure/archive/v1.0.tar.gz" + + version('1.0', '5cbb76e7d49e27a57046ab641b666f97') + + depends_on('py-cython', type='build') + depends_on('py-numpy', type=('build', 'run')) + depends_on('gsl') |