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authorJustin S <3630356+codeandkey@users.noreply.github.com>2020-07-21 21:29:18 -0500
committerGitHub <noreply@github.com>2020-07-21 19:29:18 -0700
commitdedadcd2ea20848092b67eb6f5cb617b6f03a673 (patch)
tree5a32409def6b1ec6f5c0be9a621422b0629bba12
parent983aeea8507f455b82cb3e5b41665a815b97306f (diff)
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hisat2 (package): add version 2.2.0, update homepage (#17600)
-rw-r--r--var/spack/repos/builtin/packages/hisat2/package.py9
1 files changed, 7 insertions, 2 deletions
diff --git a/var/spack/repos/builtin/packages/hisat2/package.py b/var/spack/repos/builtin/packages/hisat2/package.py
index 93b54e9ed5..ab03df4ce5 100644
--- a/var/spack/repos/builtin/packages/hisat2/package.py
+++ b/var/spack/repos/builtin/packages/hisat2/package.py
@@ -14,13 +14,18 @@ class Hisat2(MakefilePackage):
exome sequencing data) against the general human population (as well as
against a single reference genome)."""
- homepage = "http://ccb.jhu.edu/software/hisat2"
+ homepage = "https://daehwankimlab.github.io/hisat2/"
url = "ftp://ftp.ccb.jhu.edu/pub/infphilo/hisat2/downloads/hisat2-2.1.0-source.zip"
+ version('2.2.0', sha256='0dd55168853b82c1b085f79ed793dd029db163773f52272d7eb51b3b5e4a4cdd',
+ url='https://cloud.biohpc.swmed.edu/index.php/s/hisat2-220-source/download',
+ extension='zip')
version('2.1.0', sha256='89a276eed1fc07414b1601947bc9466bdeb50e8f148ad42074186fe39a1ee781')
def install(self, spec, prefix):
- install_tree('doc', prefix.doc)
+ if spec.satisfies('@:2.1.0'):
+ install_tree('doc', prefix.doc)
+
install_tree('example', prefix.example)
install_tree('hisatgenotype_modules', prefix.hisatgenotype_modules)
install_tree('hisatgenotype_scripts', prefix.hisatgenotype_scripts)