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| author | Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com> | 2021-10-12 19:39:09 +0200 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2021-10-12 11:39:09 -0600 |
| commit | 862ce517ce96c26c11825c691607ddeb3c36c164 (patch) | |
| tree | b0b8d7479a9bec114bdfe24ef1f74ec4b725483b | |
| parent | 50a2316a1572c0ff6a2649e1fe34be589089bfda (diff) | |
| download | spack-862ce517ce96c26c11825c691607ddeb3c36c164.tar.gz spack-862ce517ce96c26c11825c691607ddeb3c36c164.tar.bz2 spack-862ce517ce96c26c11825c691607ddeb3c36c164.tar.xz spack-862ce517ce96c26c11825c691607ddeb3c36c164.zip | |
gromacs: @2018:2020: add #include <limits> for newer %gcc builds (#26678)
gromacs@2018:2020.6 is fixed to build with gcc@11.2.0
by adding #include <limits> to a few header files.
Thanks to Maciej Wójcik <w8jcik@gmail.com> for testing versions.
| -rw-r--r-- | var/spack/repos/builtin/packages/gromacs/package.py | 14 |
1 files changed, 14 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/gromacs/package.py b/var/spack/repos/builtin/packages/gromacs/package.py index defd362c95..aeb2da8c3e 100644 --- a/var/spack/repos/builtin/packages/gromacs/package.py +++ b/var/spack/repos/builtin/packages/gromacs/package.py @@ -172,6 +172,20 @@ class Gromacs(CMakePackage): relative_root=os.path.join('share', 'cmake', 'gromacs')) def patch(self): + # Otherwise build fails with GCC 11 (11.2) + if self.spec.satisfies('@2018:2020.6'): + filter_file('#include <vector>', '#include <vector>\n#include <limits>', + 'src/gromacs/awh/biasparams.h') + if self.spec.satisfies('@2018:2018.8'): + filter_file('#include <vector>', '#include <vector>\n#include <limits>', + 'src/gromacs/mdlib/minimize.cpp') + if self.spec.satisfies('@2019:2019.6,2020:2020.6'): + filter_file('#include <vector>', '#include <vector>\n#include <limits>', + 'src/gromacs/mdrun/minimize.cpp') + if self.spec.satisfies('@2020:2020.6'): + filter_file('#include <queue>', '#include <queue>\n#include <limits>', + 'src/gromacs/modularsimulator/modularsimulator.h') + if '+plumed' in self.spec: self.spec['plumed'].package.apply_patch(self) |