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| author | snehring <snehring@users.noreply.github.com> | 2022-04-27 05:26:57 -0500 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2022-04-27 12:26:57 +0200 |
| commit | da3d315cba944d1b40cb73970fc3149e6401c295 (patch) | |
| tree | 33094a8ed502cea31db24453ff63f44747975c9b | |
| parent | 48ff4c7679dc6fe36d14edfd7e0f7fea05263eb6 (diff) | |
| download | spack-da3d315cba944d1b40cb73970fc3149e6401c295.tar.gz spack-da3d315cba944d1b40cb73970fc3149e6401c295.tar.bz2 spack-da3d315cba944d1b40cb73970fc3149e6401c295.tar.xz spack-da3d315cba944d1b40cb73970fc3149e6401c295.zip | |
blat: add v37 (#30166)
| -rw-r--r-- | var/spack/repos/builtin/packages/blat/package.py | 15 |
1 files changed, 14 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/blat/package.py b/var/spack/repos/builtin/packages/blat/package.py index dd2f3279f2..bbde090ae2 100644 --- a/var/spack/repos/builtin/packages/blat/package.py +++ b/var/spack/repos/builtin/packages/blat/package.py @@ -11,11 +11,24 @@ class Blat(Package): alignment algorithm.""" homepage = "https://genome.ucsc.edu/FAQ/FAQblat.html" - url = "https://users.soe.ucsc.edu/~kent/src/blatSrc35.zip" + url = "https://genome-test.gi.ucsc.edu/~kent/src/blatSrc35.zip" + maintainers = ['snehring'] + version('37', sha256='88ee2b272d42ab77687c61d200b11f1d58443951069feb7e10226a2509f84cf2') version('35', sha256='06d9bcf114ec4a4b21fef0540a0532556b6602322a5a2b33f159dc939ae53620') depends_on('libpng') + depends_on('libuuid', when='@37:') + depends_on('mysql-client', when='@37:') + + @when('@37') + def patch(self): + filter_file(r',src\/hg\/', ',NOMATCHME', 'inc/userApp.mk') + + def flag_handler(self, name, flags): + if self.spec.satisfies('@35') and name.lower() == 'cflags': + flags.append('-fcommon') + return (flags, None, None) def setup_build_environment(self, env): env.set('MACHTYPE', 'x86_64') |