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authorGeorge Young <A-N-Other@users.noreply.github.com>2024-02-27 09:44:34 +0000
committerGitHub <noreply@github.com>2024-02-27 10:44:34 +0100
commit2a9fc3452a07c6e9cb37e4e1442729ca02b613d1 (patch)
tree95b426fc78d380cc4573dd07a050930ffbcccd3b
parent2ea8a2e6aef4c8a8a911dcadecbbd37c1938891e (diff)
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regtools: add new package (#42852)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
-rw-r--r--var/spack/repos/builtin/packages/regtools/package.py22
1 files changed, 22 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/regtools/package.py b/var/spack/repos/builtin/packages/regtools/package.py
new file mode 100644
index 0000000000..181e46c66c
--- /dev/null
+++ b/var/spack/repos/builtin/packages/regtools/package.py
@@ -0,0 +1,22 @@
+# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class Regtools(CMakePackage):
+ """Tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory
+ and splicing context"""
+
+ homepage = "https://regtools.readthedocs.org/"
+ url = "https://github.com/griffithlab/regtools/archive/refs/tags/1.0.0.tar.gz"
+
+ license("MIT", checked_by="A-N-Other")
+
+ version("1.0.0", sha256="ed2b9db6b71b943924002653caee18511a22ed7cc3c88f428e7e9e0c2e4f431b")
+
+ def install(self, spec, prefix):
+ mkdirp(prefix.bin)
+ install(join_path(self.build_directory, "regtools"), prefix.bin)