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| author | peetsv <32349688+peetsv@users.noreply.github.com> | 2018-05-08 15:54:15 -0700 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2018-05-08 17:54:15 -0500 |
| commit | 50a95c57c7a016f7ffeaa360240139f74eaa34a4 (patch) | |
| tree | d0afc0072452c53060c63721af145bec9de4bdbe | |
| parent | c12dd6135827b5dc42dc2d845df26f580e4b2f39 (diff) | |
| download | spack-50a95c57c7a016f7ffeaa360240139f74eaa34a4.tar.gz spack-50a95c57c7a016f7ffeaa360240139f74eaa34a4.tar.bz2 spack-50a95c57c7a016f7ffeaa360240139f74eaa34a4.tar.xz spack-50a95c57c7a016f7ffeaa360240139f74eaa34a4.zip | |
Py cnvkit: updating dependencies (#8057)
* py-pyfaidx: adding new package
* updating the url
* identifying dependencies
| -rw-r--r-- | var/spack/repos/builtin/packages/py-cnvkit/package.py | 4 |
1 files changed, 3 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/py-cnvkit/package.py b/var/spack/repos/builtin/packages/py-cnvkit/package.py index ed5313f2db..045c940206 100644 --- a/var/spack/repos/builtin/packages/py-cnvkit/package.py +++ b/var/spack/repos/builtin/packages/py-cnvkit/package.py @@ -41,6 +41,8 @@ class PyCnvkit(PythonPackage): depends_on('py-numpy@1.9:', type=('build', 'run')) depends_on('py-pandas@0.18.1:', type=('build', 'run')) depends_on('py-pyfaidx@0.4.7:', type=('build', 'run')) - depends_on('py-pysam@0.10.0:', type=('build', 'run')) + depends_on('py-pysam@0.10.0:0.13', type=('build', 'run')) depends_on('py-reportlab@3.0:', type=('build', 'run')) depends_on('py-scipy@0.15.0:', type=('build', 'run')) + depends_on('bcftools@1.6', type=('build', 'run')) + depends_on('samtools@1.6', type=('build', 'run')) |