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| author | 健美猞猁 <weijianwen@gmail.com> | 2019-11-19 05:09:39 +0800 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2019-11-18 14:09:39 -0700 |
| commit | e433a5dc0b8a98a13cfaee43f57787be6ead4292 (patch) | |
| tree | 0336d2cfada3fe7141d5202baf5512dd7a1d494d | |
| parent | e0746a2a079b2e2795b3838c2fcee083149174b5 (diff) | |
| download | spack-e433a5dc0b8a98a13cfaee43f57787be6ead4292.tar.gz spack-e433a5dc0b8a98a13cfaee43f57787be6ead4292.tar.bz2 spack-e433a5dc0b8a98a13cfaee43f57787be6ead4292.tar.xz spack-e433a5dc0b8a98a13cfaee43f57787be6ead4292.zip | |
py-rnacocktail: a new package. (#13761)
* py-rnacocktail: a new package.
* flake8.
* Add build-time dependencies.
| -rw-r--r-- | var/spack/repos/builtin/packages/py-rnacocktail/package.py | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-rnacocktail/package.py b/var/spack/repos/builtin/packages/py-rnacocktail/package.py new file mode 100644 index 0000000000..e2ef86a1f3 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-rnacocktail/package.py @@ -0,0 +1,25 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyRnacocktail(PythonPackage): + """RNACocktail: A comprehensive framework + for accurate and efficient RNA-Seq analysis.""" + + homepage = "http://bioinform.github.io/rnacocktail/" + url = "https://github.com/bioinform/rnacocktail/archive/v0.2.2.tar.gz" + + version('0.2.2', sha256='34aa0d1d7bd9d80303fe7dac5acc0519f7c1ed986397692588343d82ce45c7a5') + + depends_on('python@2.7:2.8', type=('build', 'run')) + depends_on('py-setuptools', type='build') + depends_on('py-pybedtools', type=('build', 'run')) + depends_on('py-pysam', type=('build', 'run')) + # Higher version of py-pandas and py-numpy + # depends on python@3: which conflicts with py-rnacocktail + depends_on('py-pandas@:0.24.2', type=('build', 'run')) + depends_on('py-numpy@:1.16.5', type=('build', 'run')) |