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| author | Glenn Johnson <glenn-johnson@uiowa.edu> | 2016-04-06 23:05:49 -0500 |
|---|---|---|
| committer | Glenn Johnson <glenn-johnson@uiowa.edu> | 2016-04-06 23:05:49 -0500 |
| commit | 8a7f34665b0b8b95f273401082d862989bb4443c (patch) | |
| tree | f9bd92ce46fffe673ad063a6c555cc48ebb98079 | |
| parent | b19d6ab9c5e4b7a8289e057826b498dd93ea7e08 (diff) | |
| download | spack-8a7f34665b0b8b95f273401082d862989bb4443c.tar.gz spack-8a7f34665b0b8b95f273401082d862989bb4443c.tar.bz2 spack-8a7f34665b0b8b95f273401082d862989bb4443c.tar.xz spack-8a7f34665b0b8b95f273401082d862989bb4443c.zip | |
Make sure base bioconductor package can be installed.
| -rw-r--r-- | var/spack/repos/builtin/packages/r-BiocGenerics/package.py | 13 |
1 files changed, 13 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-BiocGenerics/package.py b/var/spack/repos/builtin/packages/r-BiocGenerics/package.py new file mode 100644 index 0000000000..e2d9bb9594 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-BiocGenerics/package.py @@ -0,0 +1,13 @@ +from spack import * + +class RBiocgenerics(Package): + """S4 generic functions needed by many Bioconductor packages.""" + homepage = 'https://www.bioconductor.org/packages/release/bioc/html/BiocGenerics.html' + url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.16.1.tar.gz" + + version('0.16.1', 'c2148ffd86fc6f1f819c7f68eb2c744f', expand=False) + + extends('R') + + def install(self, spec, prefix): + R('CMD', 'INSTALL', '--library=%s' % self.module.r_lib_dir, '%s' % self.stage.archive_file) |