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authorAdam J. Stewart <ajstewart426@gmail.com>2018-04-13 00:08:10 -0500
committerMassimiliano Culpo <massimiliano.culpo@gmail.com>2018-04-13 07:08:10 +0200
commitb9b19e1660b92090cb519b8eccba46c08104edd8 (patch)
treec7f45e030ee0ff0dd378f927068bc3d3dedd03ea
parent21914d36beb54b0f59638584ceafeb6b28ff97e0 (diff)
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Fix www.example.com homepages (#7744)
-rw-r--r--var/spack/repos/builtin/packages/py-editdistance/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-cner/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-phangorn/package.py2
-rw-r--r--var/spack/repos/builtin/packages/r-yarn/package.py2
6 files changed, 6 insertions, 6 deletions
diff --git a/var/spack/repos/builtin/packages/py-editdistance/package.py b/var/spack/repos/builtin/packages/py-editdistance/package.py
index a36b40ea9b..a62c6e49c5 100644
--- a/var/spack/repos/builtin/packages/py-editdistance/package.py
+++ b/var/spack/repos/builtin/packages/py-editdistance/package.py
@@ -28,7 +28,7 @@ from spack import *
class PyEditdistance(PythonPackage):
"""Fast implementation of the edit distance (Levenshtein distance)."""
- homepage = "http://www.example.com://github.com/aflc/editdistance"
+ homepage = "https://github.com/aflc/editdistance"
url = "https://pypi.io/packages/source/e/editdistance/editdistance-0.4.tar.gz"
version('0.4', '27434720ca0930a9b6974b182b6237bc')
diff --git a/var/spack/repos/builtin/packages/r-cner/package.py b/var/spack/repos/builtin/packages/r-cner/package.py
index 9ba532db40..3af527dec1 100644
--- a/var/spack/repos/builtin/packages/r-cner/package.py
+++ b/var/spack/repos/builtin/packages/r-cner/package.py
@@ -29,7 +29,7 @@ class RCner(RPackage):
""""Large-scale identification and advanced visualization of sets of
conserved noncoding elements."""
- homepage = "http://www.example.co://bioconductor.org/packages/CNEr/"
+ homepage = "https://bioconductor.org/packages/CNEr/"
url = "https://git.bioconductor.org/packages/CNEr"
version('1.14.0', git='https://git.bioconductor.org/packages/CNEr', commit='b8634d65c51728c815127e22b45eba7c9b9db897')
diff --git a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
index 819d0a77ed..92e6ba4089 100644
--- a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
+++ b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
@@ -29,7 +29,7 @@ class RGenomeinfodbdata(RPackage):
"""for mapping between NCBI taxonomy ID and species. Used by functions
in the GenomeInfoDb package."""
- homepage = "http://www.example.co://bioconductor.org/packages/3.5/data/annotation/html/GenomeInfoDbData.html"
+ homepage = "https://bioconductor.org/packages/GenomeInfoDbData/"
url = "https://bioconductor.org/packages/3.5/data/annotation/src/contrib/GenomeInfoDbData_0.99.0.tar.gz"
version('0.99.0', '85977b51061dd02a90153db887040d05')
diff --git a/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py b/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py
index 406dd906bc..a781deb8d0 100644
--- a/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py
+++ b/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py
@@ -29,7 +29,7 @@ class ROrgHsEgDb(RPackage):
"""Genome wide annotation for Human, primarily based on mapping
using Entrez Gene identifiers."""
- homepage = "http://www.example.co://www.bioconductor.org/packages/org.Hs.eg.db/i"
+ homepage = "https://bioconductor.org/packages/org.Hs.eg.db/"
url = "https://www.bioconductor.org/packages/3.5/data/annotation/src/contrib/org.Hs.eg.db_3.4.1.tar.gz"
version('3.4.1', '0a987ef7d6167df70e91e6f48145e41c')
diff --git a/var/spack/repos/builtin/packages/r-phangorn/package.py b/var/spack/repos/builtin/packages/r-phangorn/package.py
index 7997da7110..b43c9ce825 100644
--- a/var/spack/repos/builtin/packages/r-phangorn/package.py
+++ b/var/spack/repos/builtin/packages/r-phangorn/package.py
@@ -31,7 +31,7 @@ class RPhangorn(RPackage):
and Hadamard conjugation. Allows to compare trees, models selection and
offers visualizations for trees and split networks."""
- homepage = "http://www.example.co://github.com/KlausVigo/phangorn"
+ homepage = "https://cran.r-project.org/package=phangorn"
url = "https://cran.r-project.org/src/contrib/phangorn_2.3.1.tar.gz"
list_url = "https://cran.r-project.org/src/contrib/Archive/phangorn"
diff --git a/var/spack/repos/builtin/packages/r-yarn/package.py b/var/spack/repos/builtin/packages/r-yarn/package.py
index 5ae0139ad1..6744f9cde1 100644
--- a/var/spack/repos/builtin/packages/r-yarn/package.py
+++ b/var/spack/repos/builtin/packages/r-yarn/package.py
@@ -33,7 +33,7 @@ class RYarn(RPackage):
and statistical techniques to account for the large heterogeneity and
sparsity found in very large RNA-seq experiments."""
- homepage = "http://www.example.co://www.bioconductor.org/packages/yarn/"
+ homepage = "https://bioconductor.org/packages/yarn/"
url = "https://git.bioconductor.org/packages/yarn"
list_url = homepage