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author | Andreas Baumbach <healther@users.noreply.github.com> | 2021-02-26 09:02:17 +0100 |
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committer | Massimiliano Culpo <massimiliano.culpo@gmail.com> | 2021-05-21 19:42:12 +0200 |
commit | bd9929f9dc9649f84f710fb2c6540db1d0ea946a (patch) | |
tree | c41dd06fd4f09008fda7b432bbe80dd846cec858 | |
parent | 2a5f46d8d33ea42ec506544d7727843073398b11 (diff) | |
download | spack-bd9929f9dc9649f84f710fb2c6540db1d0ea946a.tar.gz spack-bd9929f9dc9649f84f710fb2c6540db1d0ea946a.tar.bz2 spack-bd9929f9dc9649f84f710fb2c6540db1d0ea946a.tar.xz spack-bd9929f9dc9649f84f710fb2c6540db1d0ea946a.zip |
make `spack fetch` work with environments (#19166)
* make `spack fetch` work with environments
* previously: `spack fetch` required the explicit statement of
the specs to be fetched, even when in an environment
* now: if there is no spec(s) provided to `spack fetch` we check
if an environment is active and if yes we fetch all
uninstalled specs.
-rw-r--r-- | lib/spack/spack/cmd/fetch.py | 48 | ||||
-rw-r--r-- | lib/spack/spack/environment.py | 28 | ||||
-rw-r--r-- | lib/spack/spack/test/cmd/env.py | 13 | ||||
-rw-r--r-- | lib/spack/spack/test/cmd/fetch.py | 48 |
4 files changed, 117 insertions, 20 deletions
diff --git a/lib/spack/spack/cmd/fetch.py b/lib/spack/spack/cmd/fetch.py index b91eb52ab8..d2cd53c69f 100644 --- a/lib/spack/spack/cmd/fetch.py +++ b/lib/spack/spack/cmd/fetch.py @@ -8,6 +8,7 @@ import llnl.util.tty as tty import spack.cmd import spack.cmd.common.arguments as arguments import spack.config +import spack.environment as ev import spack.repo description = "fetch archives for packages" @@ -18,22 +19,51 @@ level = "long" def setup_parser(subparser): arguments.add_common_arguments(subparser, ['no_checksum']) subparser.add_argument( - '-m', '--missing', action='store_true', - help="fetch only missing (not yet installed) dependencies") + "-m", + "--missing", + action="store_true", + help="fetch only missing (not yet installed) dependencies", + ) subparser.add_argument( - '-D', '--dependencies', action='store_true', - help="also fetch all dependencies") - arguments.add_common_arguments(subparser, ['specs']) + "-D", + "--dependencies", + action="store_true", + help="also fetch all dependencies", + ) + arguments.add_common_arguments(subparser, ["specs"]) + subparser.epilog = ( + "With an active environment, the specs " + "parameter can be omitted. In this case all (uninstalled" + ", in case of --missing) specs from the environment are fetched" + ) def fetch(parser, args): - if not args.specs: - tty.die("fetch requires at least one package argument") + if args.specs: + specs = spack.cmd.parse_specs(args.specs, concretize=True) + else: + # No specs were given explicitly, check if we are in an + # environment. If yes, check the missing argument, if yes + # fetch all uninstalled specs from it otherwise fetch all. + # If we are also not in an environment, complain to the + # user that we don't know what to do. + env = ev.get_env(args, "fetch") + if env: + if args.missing: + specs = env.uninstalled_specs() + else: + specs = env.all_specs() + if specs == []: + tty.die( + "No uninstalled specs in environment. Did you " + "run `spack concretize` yet?" + ) + else: + tty.die("fetch requires at least one spec argument") if args.no_checksum: - spack.config.set('config:checksum', False, scope='command_line') + spack.config.set("config:checksum", False, scope="command_line") - specs = spack.cmd.parse_specs(args.specs, concretize=True) for spec in specs: if args.missing or args.dependencies: for s in spec.traverse(): diff --git a/lib/spack/spack/environment.py b/lib/spack/spack/environment.py index 38c2c4cdb7..868ebb6ac5 100644 --- a/lib/spack/spack/environment.py +++ b/lib/spack/spack/environment.py @@ -1387,6 +1387,21 @@ class Environment(object): os.remove(build_log_link) os.symlink(spec.package.build_log_path, build_log_link) + def uninstalled_specs(self): + """Return a list of all uninstalled (and non-dev) specs.""" + # Do the installed check across all specs within a single + # DB read transaction to reduce time spent in lock acquisition. + uninstalled_specs = [] + with spack.store.db.read_transaction(): + for concretized_hash in self.concretized_order: + spec = self.specs_by_hash[concretized_hash] + if not spec.package.installed or ( + spec.satisfies('dev_path=*') or + spec.satisfies('^dev_path=*') + ): + uninstalled_specs.append(spec) + return uninstalled_specs + def install_all(self, args=None, **install_args): """Install all concretized specs in an environment. @@ -1397,22 +1412,13 @@ class Environment(object): args (Namespace): argparse namespace with command arguments install_args (dict): keyword install arguments """ + tty.debug('Assessing installation status of environment packages') # If "spack install" is invoked repeatedly for a large environment # where all specs are already installed, the operation can take # a large amount of time due to repeatedly acquiring and releasing # locks, this does an initial check across all specs within a single # DB read transaction to reduce time spent in this case. - tty.debug('Assessing installation status of environment packages') - specs_to_install = [] - with spack.store.db.read_transaction(): - for concretized_hash in self.concretized_order: - spec = self.specs_by_hash[concretized_hash] - if not spec.package.installed or ( - spec.satisfies('dev_path=*') or - spec.satisfies('^dev_path=*') - ): - # If it's a dev build it could need to be reinstalled - specs_to_install.append(spec) + specs_to_install = self.uninstalled_specs() if not specs_to_install: tty.msg('All of the packages are already installed') diff --git a/lib/spack/spack/test/cmd/env.py b/lib/spack/spack/test/cmd/env.py index 72f1b86347..44b5caf5f9 100644 --- a/lib/spack/spack/test/cmd/env.py +++ b/lib/spack/spack/test/cmd/env.py @@ -139,6 +139,19 @@ def test_concretize(): assert any(x.name == 'mpileaks' for x in env_specs) +def test_env_uninstalled_specs(install_mockery, mock_fetch): + e = ev.create('test') + e.add('cmake-client') + e.concretize() + assert any(s.name == 'cmake-client' for s in e.uninstalled_specs()) + e.install_all() + assert not any(s.name == 'cmake-client' for s in e.uninstalled_specs()) + e.add('mpileaks') + e.concretize() + assert not any(s.name == 'cmake-client' for s in e.uninstalled_specs()) + assert any(s.name == 'mpileaks' for s in e.uninstalled_specs()) + + def test_env_install_all(install_mockery, mock_fetch): e = ev.create('test') e.add('cmake-client') diff --git a/lib/spack/spack/test/cmd/fetch.py b/lib/spack/spack/test/cmd/fetch.py new file mode 100644 index 0000000000..d2f17eeb1b --- /dev/null +++ b/lib/spack/spack/test/cmd/fetch.py @@ -0,0 +1,48 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +import pytest + +import spack.environment as ev + +from spack.main import SpackCommand, SpackCommandError + + +# everything here uses the mock_env_path +pytestmark = pytest.mark.usefixtures( + "mutable_mock_env_path", "config", "mutable_mock_repo" +) + + +@pytest.mark.disable_clean_stage_check +def test_fetch_in_env( + tmpdir, mock_archive, mock_stage, mock_fetch, install_mockery +): + SpackCommand("env")("create", "test") + with ev.read("test"): + SpackCommand("add")("python") + with pytest.raises(SpackCommandError): + SpackCommand("fetch")() + SpackCommand("concretize")() + SpackCommand("fetch")() + + +@pytest.mark.disable_clean_stage_check +def test_fetch_single_spec( + tmpdir, mock_archive, mock_stage, mock_fetch, install_mockery +): + SpackCommand("fetch")("mpileaks") + + +@pytest.mark.disable_clean_stage_check +def test_fetch_multiple_specs( + tmpdir, mock_archive, mock_stage, mock_fetch, install_mockery +): + SpackCommand("fetch")("mpileaks", "gcc@10.2.0", "python") + + +def test_fetch_no_argument(): + with pytest.raises(SpackCommandError): + SpackCommand("fetch")() |