summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorGlenn Johnson <glenn-johnson@uiowa.edu>2021-04-20 04:36:32 -0500
committerGitHub <noreply@github.com>2021-04-20 03:36:32 -0600
commite0052505552ec42f711ae2a40479352eab951034 (patch)
tree13353cb9679fb7a78263f02dd4370af622bb7383
parent89838bae1d1ad68959b9b5f473aaf78b41190cf3 (diff)
downloadspack-e0052505552ec42f711ae2a40479352eab951034.tar.gz
spack-e0052505552ec42f711ae2a40479352eab951034.tar.bz2
spack-e0052505552ec42f711ae2a40479352eab951034.tar.xz
spack-e0052505552ec42f711ae2a40479352eab951034.zip
r-illuminahumanmethylation450kmanifest: new package (#23100)
-rw-r--r--var/spack/repos/builtin/packages/r-illuminahumanmethylation450kmanifest/package.py18
1 files changed, 18 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-illuminahumanmethylation450kmanifest/package.py b/var/spack/repos/builtin/packages/r-illuminahumanmethylation450kmanifest/package.py
new file mode 100644
index 0000000000..1824d082f9
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-illuminahumanmethylation450kmanifest/package.py
@@ -0,0 +1,18 @@
+# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class RIlluminahumanmethylation450kmanifest(RPackage):
+ """Annotation for Illumina's 450k methylation arrays"""
+
+ url = "https://bioconductor.org/packages/release/data/annotation/src/contrib/IlluminaHumanMethylation450kmanifest_0.4.0.tar.gz"
+ bioc = "IlluminaHumanMethylation450kmanifest"
+
+ version('0.4.0', sha256='41b2e54bac3feafc7646fe40bce3aa2b92c10871b0a13657c5736517792fa763')
+
+ depends_on('r@2.13.0:', type=('build', 'run'))
+ depends_on('r-minfi', type=('build', 'run'))