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| author | Justin S <3630356+codeandkey@users.noreply.github.com> | 2019-05-17 14:32:21 -0500 |
|---|---|---|
| committer | Levi Baber <baberlevi@gmail.com> | 2019-05-17 14:32:21 -0500 |
| commit | 7a459857e778f0d73cdb1c208c13a9cdc6ffed59 (patch) | |
| tree | 9f0a64b73989b25f58b940ab87928ebd3fc784d9 | |
| parent | 79a0da6098cdf5e46ac493d6e3ae49424a62f4fc (diff) | |
| download | spack-7a459857e778f0d73cdb1c208c13a9cdc6ffed59.tar.gz spack-7a459857e778f0d73cdb1c208c13a9cdc6ffed59.tar.bz2 spack-7a459857e778f0d73cdb1c208c13a9cdc6ffed59.tar.xz spack-7a459857e778f0d73cdb1c208c13a9cdc6ffed59.zip | |
py-pybedtools: new package at 0.6.9 (#11475)
* py-pybedtools: new package at 0.6.9
* py-pybedtools: add bedtools2 dep
| -rw-r--r-- | var/spack/repos/builtin/packages/py-pybedtools/package.py | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-pybedtools/package.py b/var/spack/repos/builtin/packages/py-pybedtools/package.py new file mode 100644 index 0000000000..a0bab2d445 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-pybedtools/package.py @@ -0,0 +1,23 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyPybedtools(PythonPackage): + """Python wrapper -- and more -- for Aaron Quinlan's BEDTools""" + + homepage = "http://daler.github.io/pybedtools" + url = "https://github.com/daler/pybedtools/archive/v0.6.9.tar.gz" + + version('0.6.9', sha256='2639e80917999e76572017fd93757e8d7ceb384f0b92647ccfdd23a0d60def7c') + + depends_on('bedtools2', type='run') + depends_on('py-cython', type=('build', 'run')) + depends_on('py-pysam', type=('build', 'run')) + depends_on('py-pandas', type=('build', 'run')) + depends_on('py-six', type=('build', 'run')) + depends_on('py-numpy', type=('build', 'run')) + depends_on('py-setuptools', type='build') |