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| author | Justin Stanley <molecuul@users.noreply.github.com> | 2019-02-26 19:14:58 -0600 |
|---|---|---|
| committer | Peter Scheibel <scheibel1@llnl.gov> | 2019-02-26 19:14:58 -0600 |
| commit | cbecf9f55588242388d300ea76b732cc0533e4bc (patch) | |
| tree | 264dece0f0abbddc620abf5c390edd733b024b27 | |
| parent | fbdbed1180fc4bd9b3180e101b8e7642cca3dc67 (diff) | |
| download | spack-cbecf9f55588242388d300ea76b732cc0533e4bc.tar.gz spack-cbecf9f55588242388d300ea76b732cc0533e4bc.tar.bz2 spack-cbecf9f55588242388d300ea76b732cc0533e4bc.tar.xz spack-cbecf9f55588242388d300ea76b732cc0533e4bc.zip | |
new package: phred (#10700)
Part of the software collection introduced in #10529. Developers must
be contacted via email to receive the source code.
| -rw-r--r-- | var/spack/repos/builtin/packages/phred/package.py | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/phred/package.py b/var/spack/repos/builtin/packages/phred/package.py new file mode 100644 index 0000000000..9744305f47 --- /dev/null +++ b/var/spack/repos/builtin/packages/phred/package.py @@ -0,0 +1,21 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * +import os + + +class Phred(MakefilePackage): + """The phred software reads DNA sequencing trace files, calls bases, + and assigns a quality value to each called base.""" + + homepage = "http://www.phrap.org/phredphrapconsed.html" + url = "file://{0}/phred.tar.gz".format(os.getcwd()) + + version('071220', sha256='26212f13fa906c1ca0af61f48d52a5f2c1aacba802bf729ba65ca5222463abce') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('phred', prefix.bin) |