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| author | Audrey Thoma <las_thoma15@iastate.edu> | 2017-08-07 12:01:50 -0500 |
|---|---|---|
| committer | becker33 <becker33@llnl.gov> | 2017-08-07 10:01:50 -0700 |
| commit | c0e22049089de8552ce34a1bbedbba7ae487ca81 (patch) | |
| tree | dacd73e412e08c342fa20dbfb9fb86601e381dbc | |
| parent | 0bd55cb8ce6350d8049023e4dc2c7cb68a77e443 (diff) | |
| download | spack-c0e22049089de8552ce34a1bbedbba7ae487ca81.tar.gz spack-c0e22049089de8552ce34a1bbedbba7ae487ca81.tar.bz2 spack-c0e22049089de8552ce34a1bbedbba7ae487ca81.tar.xz spack-c0e22049089de8552ce34a1bbedbba7ae487ca81.zip | |
velvet: new package (#4996)
| -rw-r--r-- | var/spack/repos/builtin/packages/velvet/package.py | 40 |
1 files changed, 40 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/velvet/package.py b/var/spack/repos/builtin/packages/velvet/package.py new file mode 100644 index 0000000000..48e0e04d1a --- /dev/null +++ b/var/spack/repos/builtin/packages/velvet/package.py @@ -0,0 +1,40 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Velvet(MakefilePackage): + """Velvet is a de novo genomic assembler specially designed for short read + sequencing technologies.""" + + homepage = "http://www.ebi.ac.uk/~zerbino/velvet/" + url = "http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz" + + version('1.2.10', '6e28c4b9bedc5f7ab2b947e7266a02f6') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('velvetg', prefix.bin) + install('velveth', prefix.bin) |