summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorGlenn Johnson <glenn-johnson@uiowa.edu>2016-07-30 16:28:43 -0500
committerGlenn Johnson <glenn-johnson@uiowa.edu>2016-07-30 16:28:43 -0500
commite9944150a5023161fb040de418a2fd58edfc528c (patch)
tree1bb4ce33d2db2d712bafb90583aa68049adca6d8
parente04662f84ff9fdf30221f0a50d566eb5ded0f20c (diff)
downloadspack-e9944150a5023161fb040de418a2fd58edfc528c.tar.gz
spack-e9944150a5023161fb040de418a2fd58edfc528c.tar.bz2
spack-e9944150a5023161fb040de418a2fd58edfc528c.tar.xz
spack-e9944150a5023161fb040de418a2fd58edfc528c.zip
New package - r-vcd
Visualizing Categorical Data
-rw-r--r--var/spack/repos/builtin/packages/r-lmtest/package.py45
-rw-r--r--var/spack/repos/builtin/packages/r-vcd/package.py50
2 files changed, 95 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-lmtest/package.py b/var/spack/repos/builtin/packages/r-lmtest/package.py
new file mode 100644
index 0000000000..31a36f1f7e
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-lmtest/package.py
@@ -0,0 +1,45 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RLmtest(Package):
+ """A collection of tests, data sets, and examples for diagnostic checking
+ in linear regression models. Furthermore, some generic tools for inference
+ in parametric models are provided."""
+
+ homepage = "https://cran.r-project.org/package=lmtest"
+ url = "https://cran.r-project.org/src/contrib/lmtest_0.9-34.tar.gz"
+ list_url = "https://cran.r-project.org/src/contrib/Archive/lmtest"
+
+ version('0.9-34', 'fcdf7286bb5ccc2ca46be00bf25ac2fe')
+
+ extends('R')
+
+ depends_on('r-zoo', type=nolink)
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)
diff --git a/var/spack/repos/builtin/packages/r-vcd/package.py b/var/spack/repos/builtin/packages/r-vcd/package.py
new file mode 100644
index 0000000000..06e609b1ef
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-vcd/package.py
@@ -0,0 +1,50 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RVcd(Package):
+ """Visualization techniques, data sets, summary and inference procedures
+ aimed particularly at categorical data. Special emphasis is given to highly
+ extensible grid graphics. The package was package was originally inspired
+ by the book "Visualizing Categorical Data" by Michael Friendly and is now
+ the main support package for a new book, "Discrete Data Analysis with R" by
+ Michael Friendly and David Meyer (2015)."""
+
+ homepage = "https://cran.r-project.org/package=vcd"
+ url = "https://cran.r-project.org/src/contrib/vcd_1.4-1.tar.gz"
+ list_url = "https://cran.r-project.org/src/contrib/Archive/vcd"
+
+ version('1.4-1', '7db150a77f173f85b69a1f86f73f8f02')
+
+ extends('R')
+
+ depends_on('r-mass', type=nolink)
+ depends_on('r-colorspace', type=nolink)
+ depends_on('r-lmtest', type=nolink)
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)