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author | Harmen Stoppels <harmenstoppels@gmail.com> | 2023-03-27 18:42:16 +0200 |
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committer | GitHub <noreply@github.com> | 2023-03-27 09:42:16 -0700 |
commit | 5072e48dabec81699542220ccd6595a097f7f8d1 (patch) | |
tree | 63bf9734f3134eba3706b8a81046837cf346982f /lib | |
parent | c5b3fc6929208fdc0c308e748e048fb17b26b2d3 (diff) | |
download | spack-5072e48dabec81699542220ccd6595a097f7f8d1.tar.gz spack-5072e48dabec81699542220ccd6595a097f7f8d1.tar.bz2 spack-5072e48dabec81699542220ccd6595a097f7f8d1.tar.xz spack-5072e48dabec81699542220ccd6595a097f7f8d1.zip |
Add `llnl.util.filesystem.find_first` (#36083)
Add a `find_first` method that locates one instance of a file
that matches a specified pattern by recursively searching a directory
tree. Unlike other `find` methods, this only locates one file at most,
so can use optimizations that avoid searching the entire tree:
Typically the relevant files are at low depth, so it makes sense to
locate files through iterative deepening and early exit.
Diffstat (limited to 'lib')
-rw-r--r-- | lib/spack/llnl/util/filesystem.py | 138 | ||||
-rw-r--r-- | lib/spack/spack/test/llnl/util/filesystem.py | 31 |
2 files changed, 168 insertions, 1 deletions
diff --git a/lib/spack/llnl/util/filesystem.py b/lib/spack/llnl/util/filesystem.py index 8af2f28342..2b4cbe2424 100644 --- a/lib/spack/llnl/util/filesystem.py +++ b/lib/spack/llnl/util/filesystem.py @@ -5,18 +5,20 @@ import collections import collections.abc import errno +import fnmatch import glob import hashlib import itertools import numbers import os +import posixpath import re import shutil import stat import sys import tempfile from contextlib import contextmanager -from typing import Callable, List, Match, Optional, Tuple, Union +from typing import Callable, Iterable, List, Match, Optional, Tuple, Union from llnl.util import tty from llnl.util.lang import dedupe, memoized @@ -1671,6 +1673,38 @@ def fix_darwin_install_name(path): break +def find_first(root: str, files: Union[Iterable[str], str], bfs_depth: int = 2) -> Optional[str]: + """Find the first file matching a pattern. + + The following + + .. code-block:: console + + $ find /usr -name 'abc*' -o -name 'def*' -quit + + is equivalent to: + + >>> find_first("/usr", ["abc*", "def*"]) + + Any glob pattern supported by fnmatch can be used. + + The search order of this method is breadth-first over directories, + until depth bfs_depth, after which depth-first search is used. + + Parameters: + root (str): The root directory to start searching from + files (str or Iterable): File pattern(s) to search for + bfs_depth (int): (advanced) parameter that specifies at which + depth to switch to depth-first search. + + Returns: + str or None: The matching file or None when no file is found. + """ + if isinstance(files, str): + files = [files] + return FindFirstFile(root, *files, bfs_depth=bfs_depth).find() + + def find(root, files, recursive=True): """Search for ``files`` starting from the ``root`` directory. @@ -2720,3 +2754,105 @@ def filesummary(path, print_bytes=16) -> Tuple[int, bytes]: return size, short_contents except OSError: return 0, b"" + + +class FindFirstFile: + """Uses hybrid iterative deepening to locate the first matching + file. Up to depth ``bfs_depth`` it uses iterative deepening, which + mimics breadth-first with the same memory footprint as depth-first + search, after which it switches to ordinary depth-first search using + ``os.walk``.""" + + def __init__(self, root: str, *file_patterns: str, bfs_depth: int = 2): + """Create a small summary of the given file. Does not error + when file does not exist. + + Args: + root (str): directory in which to recursively search + file_patterns (str): glob file patterns understood by fnmatch + bfs_depth (int): until this depth breadth-first traversal is used, + when no match is found, the mode is switched to depth-first search. + """ + self.root = root + self.bfs_depth = bfs_depth + self.match: Callable + + # normcase is trivial on posix + regex = re.compile("|".join(fnmatch.translate(os.path.normcase(p)) for p in file_patterns)) + + # On case sensitive filesystems match against normcase'd paths. + if os.path is posixpath: + self.match = regex.match + else: + self.match = lambda p: regex.match(os.path.normcase(p)) + + def find(self) -> Optional[str]: + """Run the file search + + Returns: + str or None: path of the matching file + """ + self.file = None + + # First do iterative deepening (i.e. bfs through limited depth dfs) + for i in range(self.bfs_depth + 1): + if self._find_at_depth(self.root, i): + return self.file + + # Then fall back to depth-first search + return self._find_dfs() + + def _find_at_depth(self, path, max_depth, depth=0) -> bool: + """Returns True when done. Notice search can be done + either because a file was found, or because it recursed + through all directories.""" + try: + entries = os.scandir(path) + except OSError: + return True + + done = True + + with entries: + # At max depth we look for matching files. + if depth == max_depth: + for f in entries: + # Exit on match + if self.match(f.name): + self.file = os.path.join(path, f.name) + return True + + # is_dir should not require a stat call, so it's a good optimization. + if self._is_dir(f): + done = False + return done + + # At lower depth only recurse into subdirs + for f in entries: + if not self._is_dir(f): + continue + + # If any subdir is not fully traversed, we're not done yet. + if not self._find_at_depth(os.path.join(path, f.name), max_depth, depth + 1): + done = False + + # Early exit when we've found something. + if self.file: + return True + + return done + + def _is_dir(self, f: os.DirEntry) -> bool: + """Returns True when f is dir we can enter (and not a symlink).""" + try: + return f.is_dir(follow_symlinks=False) + except OSError: + return False + + def _find_dfs(self) -> Optional[str]: + """Returns match or None""" + for dirpath, _, filenames in os.walk(self.root): + for file in filenames: + if self.match(file): + return os.path.join(dirpath, file) + return None diff --git a/lib/spack/spack/test/llnl/util/filesystem.py b/lib/spack/spack/test/llnl/util/filesystem.py index 5e81b52c53..018137f406 100644 --- a/lib/spack/spack/test/llnl/util/filesystem.py +++ b/lib/spack/spack/test/llnl/util/filesystem.py @@ -871,3 +871,34 @@ def test_filesummary(tmpdir): assert fs.filesummary(p, print_bytes=8) == (26, b"abcdefgh...stuvwxyz") assert fs.filesummary(p, print_bytes=13) == (26, b"abcdefghijklmnopqrstuvwxyz") assert fs.filesummary(p, print_bytes=100) == (26, b"abcdefghijklmnopqrstuvwxyz") + + +@pytest.mark.parametrize("bfs_depth", [1, 2, 10]) +def test_find_first_file(tmpdir, bfs_depth): + # Create a structure: a/a/a/{file1,file2}, b/a, c/a, d/{a,file1} + tmpdir.join("a", "a", "a").ensure(dir=True) + tmpdir.join("b", "a").ensure(dir=True) + tmpdir.join("c", "a").ensure(dir=True) + tmpdir.join("d", "a").ensure(dir=True) + tmpdir.join("e").ensure(dir=True) + + fs.touch(tmpdir.join("a", "a", "a", "file1")) + fs.touch(tmpdir.join("a", "a", "a", "file2")) + fs.touch(tmpdir.join("d", "file1")) + + root = str(tmpdir) + + # Iterative deepening: should find low-depth file1. + assert os.path.samefile( + fs.find_first(root, "file*", bfs_depth=bfs_depth), os.path.join(root, "d", "file1") + ) + + assert fs.find_first(root, "nonexisting", bfs_depth=bfs_depth) is None + + assert os.path.samefile( + fs.find_first(root, ["nonexisting", "file2"], bfs_depth=bfs_depth), + os.path.join(root, "a", "a", "a", "file2"), + ) + + # Should find first dir + assert os.path.samefile(fs.find_first(root, "a", bfs_depth=bfs_depth), os.path.join(root, "a")) |