diff options
| author | Todd Gamblin <tgamblin@llnl.gov> | 2015-11-26 14:19:27 -0800 |
|---|---|---|
| committer | Todd Gamblin <tgamblin@llnl.gov> | 2015-11-26 14:19:27 -0800 |
| commit | 89d5127900dda96b2a583c4c1a9bdac8e51c1c15 (patch) | |
| tree | fe491c5c4046702cc9ddb84d63375e28a610f1b1 /var/spack/packages | |
| parent | 04f032d6e397ce219a673c93277683060def52fd (diff) | |
| download | spack-89d5127900dda96b2a583c4c1a9bdac8e51c1c15.tar.gz spack-89d5127900dda96b2a583c4c1a9bdac8e51c1c15.tar.bz2 spack-89d5127900dda96b2a583c4c1a9bdac8e51c1c15.tar.xz spack-89d5127900dda96b2a583c4c1a9bdac8e51c1c15.zip | |
New, cleaner package repository structure.
Package repositories now look like this:
top-level-dir/
repo.yaml
packages/
libelf/
package.py
mpich/
package.py
...
This leaves room at the top level for additional metadata, source,
per-repo configs, indexes, etc., and it makes it easy to see that
something is a spack repo (just look for repo.yaml and packages).
Diffstat (limited to 'var/spack/packages')
256 files changed, 0 insertions, 9131 deletions
diff --git a/var/spack/packages/ImageMagick/package.py b/var/spack/packages/ImageMagick/package.py deleted file mode 100644 index 753ea80ca6..0000000000 --- a/var/spack/packages/ImageMagick/package.py +++ /dev/null @@ -1,37 +0,0 @@ -from spack import * - -class Imagemagick(Package): - """ImageMagick is a image processing library""" - homepage = "http://www.imagemagic.org" - - #------------------------------------------------------------------------- - # ImageMagick does not keep around anything but *-10 versions, so - # this URL may change. If you want the bleeding edge, you can - # uncomment it and see if it works but you may need to try to - # fetch a newer version (-6, -7, -8, -9, etc.) or you can stick - # wtih the older, stable, archived -10 versions below. - # - # TODO: would be nice if spack had a way to recommend avoiding a - # TODO: bleeding edge version, but not comment it out. - # ------------------------------------------------------------------------- - # version('6.9.0-6', 'c1bce7396c22995b8bdb56b7797b4a1b', - # url="http://www.imagemagick.org/download/ImageMagick-6.9.0-6.tar.bz2") - - #------------------------------------------------------------------------- - # *-10 versions are archived, so these versions should fetch reliably. - # ------------------------------------------------------------------------- - version('6.8.9-10', 'aa050bf9785e571c956c111377bbf57c', - url="http://sourceforge.net/projects/imagemagick/files/old-sources/6.x/6.8/ImageMagick-6.8.9-10.tar.gz/download") - - depends_on('libtool') - depends_on('jpeg') - depends_on('libpng') - depends_on('freetype') - depends_on('fontconfig') - depends_on('libtiff') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/Mitos/package.py b/var/spack/packages/Mitos/package.py deleted file mode 100644 index e312da3ffc..0000000000 --- a/var/spack/packages/Mitos/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Mitos(Package): - """Mitos is a library and a tool for collecting sampled memory - performance data to view with MemAxes""" - - homepage = "https://github.com/scalability-llnl/Mitos" - url = "https://github.com/scalability-llnl/Mitos" - - version('0.9.1', 'c6cb57f3cae54f5157affd97ef7ef79e', git='https://github.com/scalability-llnl/Mitos.git', tag='v0.9.1') - - depends_on('dyninst@8.2.1:') - depends_on('hwloc') - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('..', *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/R/package.py b/var/spack/packages/R/package.py deleted file mode 100644 index 2e6f65a742..0000000000 --- a/var/spack/packages/R/package.py +++ /dev/null @@ -1,33 +0,0 @@ -from spack import * - -class R(Package): - """R is 'GNU S', a freely available language and environment for - statistical computing and graphics which provides a wide va - riety of statistical and graphical techniques: linear and - nonlinear modelling, statistical tests, time series analysis, - classification, clustering, etc. Please consult the R project - homepage for further information.""" - homepage = "http://www.example.com" - url = "http://cran.cnr.berkeley.edu/src/base/R-3/R-3.1.2.tar.gz" - - version('3.1.2', '3af29ec06704cbd08d4ba8d69250ae74') - - depends_on("readline") - depends_on("ncurses") - depends_on("icu") - depends_on("glib") - depends_on("zlib") - depends_on("libtiff") - depends_on("jpeg") - depends_on("cairo") - depends_on("pango") - depends_on("freetype") - depends_on("tcl") - depends_on("tk") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--enable-R-shlib", - "--enable-BLAS-shlib") - make() - make("install") diff --git a/var/spack/packages/SAMRAI/no-tool-build.patch b/var/spack/packages/SAMRAI/no-tool-build.patch deleted file mode 100644 index 1adf0cf721..0000000000 --- a/var/spack/packages/SAMRAI/no-tool-build.patch +++ /dev/null @@ -1,20 +0,0 @@ ---- SAMRAI/Makefile.in 2013-05-31 11:04:32.000000000 -0700 -+++ SAMRAI/Makefile.in.notools 2014-05-30 10:31:15.135979900 -0700 -@@ -8,7 +8,7 @@ - ## - ######################################################################### - --default: library tools -+default: library - - SAMRAI = @top_srcdir@ - SUBDIR = . -@@ -135,7 +135,7 @@ - done - $(MAKE) archive_remove_obj_names - --install: library tools -+install: library - $(INSTALL) -d -m 755 $(INSTDIR)/config - $(INSTALL) -d -m 755 $(INSTDIR)/lib - $(INSTALL) -d -m 755 $(INSTDIR)/bin diff --git a/var/spack/packages/SAMRAI/package.py b/var/spack/packages/SAMRAI/package.py deleted file mode 100644 index eef041f0d5..0000000000 --- a/var/spack/packages/SAMRAI/package.py +++ /dev/null @@ -1,53 +0,0 @@ -from spack import * - -class Samrai(Package): - """SAMRAI (Structured Adaptive Mesh Refinement Application Infrastructure) - is an object-oriented C++ software library enables exploration of numerical, - algorithmic, parallel computing, and software issues associated with applying - structured adaptive mesh refinement (SAMR) technology in large-scale parallel - application development. - """ - homepage = "https://computation.llnl.gov/project/SAMRAI/" - url = "https://computation.llnl.gov/project/SAMRAI/download/SAMRAI-v3.9.1.tar.gz" - list_url = homepage - - version('3.9.1', '232d04d0c995f5abf20d94350befd0b2') - version('3.7.3', '12d574eacadf8c9a70f1bb4cd1a69df6') - version('3.7.2', 'f6a716f171c9fdbf3cb12f71fa6e2737') - version('3.6.3-beta', 'ef0510bf2893042daedaca434e5ec6ce') - version('3.5.2-beta', 'd072d9d681eeb9ada15ce91bea784274') - version('3.5.0-beta', '1ad18a319fc573e12e2b1fbb6f6b0a19') - version('3.4.1-beta', '00814cbee2cb76bf8302aff56bbb385b') - version('3.3.3-beta', '1db3241d3e1cab913dc310d736c34388') - version('3.3.2-beta', 'e598a085dab979498fcb6c110c4dd26c') - version('2.4.4', '04fb048ed0efe7c531ac10c81cc5f6ac') - - depends_on("mpi") - depends_on("zlib") - depends_on("hdf5") - depends_on("boost") - - # don't build tools with gcc - patch('no-tool-build.patch', when='%gcc') - - # TODO: currently hard-coded to use openmpi - be careful! - def install(self, spec, prefix): - mpi = next(m for m in ('openmpi', 'mpich', 'mvapich') - if m in spec) - - configure( - "--prefix=%s" % prefix, - "--with-CXX=%s" % spec[mpi].prefix.bin + "/mpic++", - "--with-CC=%s" % spec[mpi].prefix.bin + "/mpicc", - "--with-hdf5=%s" % spec['hdf5'].prefix, - "--with-boost=%s" % spec['boost'].prefix, - "--with-zlib=%s" % spec['zlib'].prefix, - "--without-blas", - "--without-lapack", - "--with-hypre=no", - "--with-petsc=no", - "--enable-opt", - "--disable-debug") - - make() - make("install") diff --git a/var/spack/packages/_repo.yaml b/var/spack/packages/_repo.yaml deleted file mode 100644 index 4a371e1cad..0000000000 --- a/var/spack/packages/_repo.yaml +++ /dev/null @@ -1,2 +0,0 @@ -repo: - namespace: gov.llnl.spack diff --git a/var/spack/packages/activeharmony/package.py b/var/spack/packages/activeharmony/package.py deleted file mode 100644 index 45dcc7c0e8..0000000000 --- a/var/spack/packages/activeharmony/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class Activeharmony(Package): - """Active Harmony: a framework for auto-tuning (the automated search for values to improve the performance of a target application).""" - homepage = "http://www.dyninst.org/harmony" - url = "http://www.dyninst.org/sites/default/files/downloads/harmony/ah-4.5.tar.gz" - - version('4.5', 'caee5b864716d376e2c25d739251b2a9') - - def install(self, spec, prefix): - make("CFLAGS=-O3") - make("install", 'PREFIX=%s' % prefix) - -from spack import * - diff --git a/var/spack/packages/adept-utils/package.py b/var/spack/packages/adept-utils/package.py deleted file mode 100644 index e4a2e1523f..0000000000 --- a/var/spack/packages/adept-utils/package.py +++ /dev/null @@ -1,42 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class AdeptUtils(Package): - """Utility libraries for LLNL performance tools.""" - - homepage = "https://github.com/scalability-llnl/adept-utils" - url = "https://github.com/scalability-llnl/adept-utils/archive/v1.0.tar.gz" - - version('1.0.1', '731a310717adcb004d9d195130efee7d') - version('1.0', '5c6cd9badce56c945ac8551e34804397') - - depends_on("boost") - depends_on("mpi") - - def install(self, spec, prefix): - cmake(*std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/apex/package.py b/var/spack/packages/apex/package.py deleted file mode 100644 index 6404d5208a..0000000000 --- a/var/spack/packages/apex/package.py +++ /dev/null @@ -1,34 +0,0 @@ -from spack import * -from spack.util.environment import * - -class Apex(Package): - homepage = "http://github.com/khuck/xpress-apex" - #url = "http://github.com/khuck/xpress-apex/archive/v0.1-release-candidate.tar.gz" - url = "http://github.com/khuck/xpress-apex" - - #version('0.1', '6e039c224387348296739f6bf360d081') - #version('master', branch='master', git='https://github.com/khuck/xpress-apex.git') - version('2015-10-21', git='https://github.com/khuck/xpress-apex.git', commit='d2e66ddde689120472fc57fc546d8cd80aab745c') - - depends_on("binutils+libiberty") - depends_on("boost@1.54:") - depends_on("cmake@2.8.12:") - depends_on("activeharmony@4.5:") - depends_on("ompt-openmp") - - def install(self, spec, prefix): - - path=get_path("PATH") - path.remove(spec["binutils"].prefix.bin) - path_set("PATH", path) - with working_dir("build", create=True): - cmake('-DBOOST_ROOT=%s' % spec['boost'].prefix, - '-DUSE_BFD=TRUE', - '-DBFD_ROOT=%s' % spec['binutils'].prefix, - '-DUSE_ACTIVEHARMONY=TRUE', - '-DACTIVEHARMONY_ROOT=%s' % spec['activeharmony'].prefix, - '-DUSE_OMPT=TRUE', - '-DOMPT_ROOT=%s' % spec['ompt-openmp'].prefix, - '..', *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/arpack/package.py b/var/spack/packages/arpack/package.py deleted file mode 100644 index 8c67c536f3..0000000000 --- a/var/spack/packages/arpack/package.py +++ /dev/null @@ -1,41 +0,0 @@ -from spack import * -import os -import shutil - -class Arpack(Package): - """A collection of Fortran77 subroutines designed to solve large scale - eigenvalue problems. - """ - homepage = "http://www.caam.rice.edu/software/ARPACK/" - url = "http://www.caam.rice.edu/software/ARPACK/SRC/arpack96.tar.gz" - - version('96', 'fffaa970198b285676f4156cebc8626e') - - depends_on('blas') - depends_on('lapack') - - def patch(self): - # Filter the cray makefile to make a spack one. - shutil.move('ARMAKES/ARmake.CRAY', 'ARmake.inc') - makefile = FileFilter('ARmake.inc') - - # Be sure to use Spack F77 wrapper - makefile.filter('^FC.*', 'FC = f77') - makefile.filter('^FFLAGS.*', 'FFLAGS = -O2 -g') - - # Set up some variables. - makefile.filter('^PLAT.*', 'PLAT = ') - makefile.filter('^home.*', 'home = %s' % os.getcwd()) - makefile.filter('^BLASdir.*', 'BLASdir = %s' % self.spec['blas'].prefix) - makefile.filter('^LAPACKdir.*', 'LAPACKdir = %s' % self.spec['lapack'].prefix) - - # build the library in our own prefix. - makefile.filter('^ARPACKLIB.*', 'ARPACKLIB = %s/libarpack.a' % os.getcwd()) - - - def install(self, spec, prefix): - with working_dir('SRC'): - make('all') - - mkdirp(prefix.lib) - install('libarpack.a', prefix.lib) diff --git a/var/spack/packages/asciidoc/package.py b/var/spack/packages/asciidoc/package.py deleted file mode 100644 index 828f3b3f4f..0000000000 --- a/var/spack/packages/asciidoc/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Asciidoc(Package): - """ A presentable text document format for writing articles, UNIX man - pages and other small to medium sized documents.""" - homepage = "http://asciidoc.org" - url = "http://downloads.sourceforge.net/project/asciidoc/asciidoc/8.6.9/asciidoc-8.6.9.tar.gz" - - version('8.6.9', 'c59018f105be8d022714b826b0be130a') - - depends_on('libxml2') - depends_on('libxslt') - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix) - - make() - make("install") diff --git a/var/spack/packages/atk/package.py b/var/spack/packages/atk/package.py deleted file mode 100644 index 769805b227..0000000000 --- a/var/spack/packages/atk/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Atk(Package): - """ATK provides the set of accessibility interfaces that are - implemented by other toolkits and applications. Using the ATK - interfaces, accessibility tools have full access to view and - control running applications.""" - homepage = "https://developer.gnome.org/atk/" - url = "http://ftp.gnome.org/pub/gnome/sources/atk/2.14/atk-2.14.0.tar.xz" - - version('2.14.0', 'ecb7ca8469a5650581b1227d78051b8b') - - depends_on("glib") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/atlas/package.py b/var/spack/packages/atlas/package.py deleted file mode 100644 index fc683363a7..0000000000 --- a/var/spack/packages/atlas/package.py +++ /dev/null @@ -1,60 +0,0 @@ -from spack import * -from spack.util.executable import Executable -import os - -class Atlas(Package): - """ - Automatically Tuned Linear Algebra Software, generic shared - ATLAS is an approach for the automatic generation and optimization of - numerical software. Currently ATLAS supplies optimized versions for the - complete set of linear algebra kernels known as the Basic Linear Algebra - Subroutines (BLAS), and a subset of the linear algebra routines in the - LAPACK library. - """ - homepage = "http://math-atlas.sourceforge.net/" - - version('3.11.34', '0b6c5389c095c4c8785fd0f724ec6825', - url='http://sourceforge.net/projects/math-atlas/files/Developer%20%28unstable%29/3.11.34/atlas3.11.34.tar.bz2/download') - version('3.10.2', 'a4e21f343dec8f22e7415e339f09f6da', - url='http://downloads.sourceforge.net/project/math-atlas/Stable/3.10.2/atlas3.10.2.tar.bz2') - - # TODO: make this provide BLAS once it works better. Create a way - # TODO: to mark "beta" packages and require explicit invocation. - - # provides('blas') - - - def patch(self): - # Disable thraed check. LLNL's environment does not allow - # disabling of CPU throttling in a way that ATLAS actually - # understands. - filter_file(r'^\s+if \(thrchk\) exit\(1\);', 'if (0) exit(1);', - 'CONFIG/src/config.c') - # TODO: investigate a better way to add the check back in - # TODO: using, say, MSRs. Or move this to a variant. - - @when('@:3.10') - def install(self, spec, prefix): - with working_dir('ATLAS-Build', create=True): - configure = Executable('../configure') - configure('--prefix=%s' % prefix, '-C', 'ic', 'cc', '-C', 'if', 'f77', "--dylibs") - make() - make('check') - make('ptcheck') - make('time') - make("install") - - - def install(self, spec, prefix): - with working_dir('ATLAS-Build', create=True): - configure = Executable('../configure') - configure('--incdir=%s' % prefix.include, - '--libdir=%s' % prefix.lib, - '--cc=cc', - "--shared") - - make() - make('check') - make('ptcheck') - make('time') - make("install") diff --git a/var/spack/packages/autoconf/package.py b/var/spack/packages/autoconf/package.py deleted file mode 100644 index 5189faf054..0000000000 --- a/var/spack/packages/autoconf/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class Autoconf(Package): - """Autoconf -- system configuration part of autotools""" - homepage = "https://www.gnu.org/software/autoconf/" - url = "http://ftp.gnu.org/gnu/autoconf/autoconf-2.69.tar.gz" - - version('2.69', '82d05e03b93e45f5a39b828dc9c6c29b') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/automaded/package.py b/var/spack/packages/automaded/package.py deleted file mode 100644 index 9fbd93e3b3..0000000000 --- a/var/spack/packages/automaded/package.py +++ /dev/null @@ -1,51 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Automaded(Package): - """AutomaDeD (Automata-based Debugging for Dissimilar parallel - tasks) is a tool for automatic diagnosis of performance and - correctness problems in MPI applications. It creates - control-flow models of each MPI process and, when a failure - occurs, these models are leveraged to find the origin of - problems automatically. MPI calls are intercepted (using - wrappers) to create the models. When an MPI application hangs, - AutomaDeD creates a progress-dependence graph that helps - finding the process (or group of processes) that caused the hang. - """ - - homepage = "https://github.com/scalability-llnl/AutomaDeD" - url = "https://github.com/scalability-llnl/AutomaDeD/archive/v1.0.tar.gz" - - version('1.0', '16a3d4def2c4c77d0bc4b21de8b3ab03') - - depends_on('mpi') - depends_on('boost') - depends_on('callpath') - - def install(self, spec, prefix): - cmake("-DSTATE_TRACKER_WITH_CALLPATH=ON", *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/automake/package.py b/var/spack/packages/automake/package.py deleted file mode 100644 index 9115822730..0000000000 --- a/var/spack/packages/automake/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Automake(Package): - """Automake -- make file builder part of autotools""" - homepage = "http://www.gnu.org/software/automake/" - url = "http://ftp.gnu.org/gnu/automake/automake-1.14.tar.gz" - - version('1.14.1', 'd052a3e884631b9c7892f2efce542d75') - - depends_on('autoconf') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/bear/package.py b/var/spack/packages/bear/package.py deleted file mode 100644 index 0d4436fccc..0000000000 --- a/var/spack/packages/bear/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Bear(Package): - """Bear is a tool that generates a compilation database for clang tooling from non-cmake build systems.""" - homepage = "https://github.com/rizsotto/Bear" - url = "https://github.com/rizsotto/Bear/archive/2.0.4.tar.gz" - - version('2.0.4', 'fd8afb5e8e18f8737ba06f90bd77d011') - - depends_on("cmake") - depends_on("python") - - def install(self, spec, prefix): - cmake('.', *std_cmake_args) - - make("all") - make("install") diff --git a/var/spack/packages/bib2xhtml/package.py b/var/spack/packages/bib2xhtml/package.py deleted file mode 100644 index 7f8e0cfe5a..0000000000 --- a/var/spack/packages/bib2xhtml/package.py +++ /dev/null @@ -1,27 +0,0 @@ -from spack import * -from glob import glob - -class Bib2xhtml(Package): - """bib2xhtml is a program that converts BibTeX files into HTML.""" - homepage = "http://www.spinellis.gr/sw/textproc/bib2xhtml/" - url='http://www.spinellis.gr/sw/textproc/bib2xhtml/bib2xhtml-v3.0-15-gf506.tar.gz' - - version('3.0-15-gf506', 'a26ba02fe0053bbbf2277bdf0acf8645') - - def url_for_version(self, v): - return ('http://www.spinellis.gr/sw/textproc/bib2xhtml/bib2xhtml-v%s.tar.gz' % v) - - def install(self, spec, prefix): - # Add the bst include files to the install directory - bst_include = join_path(prefix.share, 'bib2xhtml') - mkdirp(bst_include) - for bstfile in glob('html-*bst'): - install(bstfile, bst_include) - - # Install the script and point it at the user's favorite perl - # and the bst include directory. - mkdirp(prefix.bin) - install('bib2xhtml', prefix.bin) - filter_file(r'#!/usr/bin/perl', - '#!/usr/bin/env BSTINPUTS=%s perl' % bst_include, - join_path(prefix.bin, 'bib2xhtml')) diff --git a/var/spack/packages/binutils/package.py b/var/spack/packages/binutils/package.py deleted file mode 100644 index cac0a0407f..0000000000 --- a/var/spack/packages/binutils/package.py +++ /dev/null @@ -1,30 +0,0 @@ -from spack import * - -class Binutils(Package): - """GNU binutils, which contain the linker, assembler, objdump and others""" - homepage = "http://www.gnu.org/software/binutils/" - url = "ftp://ftp.gnu.org/gnu/binutils/binutils-2.25.tar.bz2" - - version('2.25', 'd9f3303f802a5b6b0bb73a335ab89d66') - version('2.24', 'e0f71a7b2ddab0f8612336ac81d9636b') - version('2.23.2', '4f8fa651e35ef262edc01d60fb45702e') - version('2.20.1', '2b9dc8f2b7dbd5ec5992c6e29de0b764') - - variant('libiberty', default=False, description='Also install libiberty.') - - def install(self, spec, prefix): - configure_args = [ - '--prefix=%s' % prefix, - '--disable-dependency-tracking', - '--enable-interwork', - '--enable-multilib', - '--enable-shared', - '--enable-64-bit-bfd', - '--enable-targets=all'] - - if '+libiberty' in spec: - configure_args.append('--enable-install-libiberty') - - configure(*configure_args) - make() - make("install") diff --git a/var/spack/packages/bison/package.py b/var/spack/packages/bison/package.py deleted file mode 100644 index 7c526fb958..0000000000 --- a/var/spack/packages/bison/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Bison(Package): - """Bison is a general-purpose parser generator that converts - an annotated context-free grammar into a deterministic LR or - generalized LR (GLR) parser employing LALR(1) parser tables.""" - - homepage = "http://www.gnu.org/software/bison/" - url = "http://ftp.gnu.org/gnu/bison/bison-3.0.tar.gz" - - version('3.0.4', 'a586e11cd4aff49c3ff6d3b6a4c9ccf8') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/boost/package.py b/var/spack/packages/boost/package.py deleted file mode 100644 index 35824d53a2..0000000000 --- a/var/spack/packages/boost/package.py +++ /dev/null @@ -1,66 +0,0 @@ -from spack import * - -class Boost(Package): - """Boost provides free peer-reviewed portable C++ source - libraries, emphasizing libraries that work well with the C++ - Standard Library. - - Boost libraries are intended to be widely useful, and usable - across a broad spectrum of applications. The Boost license - encourages both commercial and non-commercial use. - """ - homepage = "http://www.boost.org" - url = "http://downloads.sourceforge.net/project/boost/boost/1.55.0/boost_1_55_0.tar.bz2" - list_url = "http://sourceforge.net/projects/boost/files/boost/" - list_depth = 2 - - version('1.59.0', '6aa9a5c6a4ca1016edd0ed1178e3cb87') - version('1.58.0', 'b8839650e61e9c1c0a89f371dd475546') - version('1.57.0', '1be49befbdd9a5ce9def2983ba3e7b76') - version('1.56.0', 'a744cf167b05d72335f27c88115f211d') - version('1.55.0', 'd6eef4b4cacb2183f2bf265a5a03a354') - version('1.54.0', '15cb8c0803064faef0c4ddf5bc5ca279') - version('1.53.0', 'a00d22605d5dbcfb4c9936a9b35bc4c2') - version('1.52.0', '3a855e0f919107e0ca4de4d84ad3f750') - version('1.51.0', '4b6bd483b692fd138aef84ed2c8eb679') - version('1.50.0', '52dd00be775e689f55a987baebccc462') - version('1.49.0', '0d202cb811f934282dea64856a175698') - version('1.48.0', 'd1e9a7a7f532bb031a3c175d86688d95') - version('1.47.0', 'a2dc343f7bc7f83f8941e47ed4a18200') - version('1.46.1', '7375679575f4c8db605d426fc721d506') - version('1.46.0', '37b12f1702319b73876b0097982087e0') - version('1.45.0', 'd405c606354789d0426bc07bea617e58') - version('1.44.0', 'f02578f5218f217a9f20e9c30e119c6a') - version('1.43.0', 'dd49767bfb726b0c774f7db0cef91ed1') - version('1.42.0', '7bf3b4eb841b62ffb0ade2b82218ebe6') - version('1.41.0', '8bb65e133907db727a2a825c5400d0a6') - version('1.40.0', 'ec3875caeac8c52c7c129802a8483bd7') - version('1.39.0', 'a17281fd88c48e0d866e1a12deecbcc0') - version('1.38.0', '5eca2116d39d61382b8f8235915cb267') - version('1.37.0', '8d9f990bfb7e83769fa5f1d6f065bc92') - version('1.36.0', '328bfec66c312150e4c2a78dcecb504b') - version('1.35.0', 'dce952a7214e72d6597516bcac84048b') - version('1.34.1', '2d938467e8a448a2c9763e0a9f8ca7e5') - version('1.34.0', 'ed5b9291ffad776f8757a916e1726ad0') - - - def url_for_version(self, version): - """Handle Boost's weird URLs, which write the version two different ways.""" - parts = [str(p) for p in Version(version)] - dots = ".".join(parts) - underscores = "_".join(parts) - return "http://downloads.sourceforge.net/project/boost/boost/%s/boost_%s.tar.bz2" % ( - dots, underscores) - - - def install(self, spec, prefix): - bootstrap = Executable('./bootstrap.sh') - bootstrap() - - # b2 used to be called bjam, before 1.47 (sigh) - b2name = './b2' if spec.satisfies('@1.47:') else './bjam' - - b2 = Executable(b2name) - b2('install', - '-j %s' % make_jobs, - '--prefix=%s' % prefix) diff --git a/var/spack/packages/bowtie2/bowtie2-2.5.patch b/var/spack/packages/bowtie2/bowtie2-2.5.patch deleted file mode 100644 index 290be39c73..0000000000 --- a/var/spack/packages/bowtie2/bowtie2-2.5.patch +++ /dev/null @@ -1,16 +0,0 @@ ---- Makefile 2015-02-26 10:50:00.000000000 -0800 -+++ Makefile.new 2015-07-29 18:03:59.891357399 -0700 -@@ -22,10 +22,10 @@ - # - - INC = --GCC_PREFIX = $(shell dirname `which gcc`) -+GCC_PREFIX = - GCC_SUFFIX = --CC = $(GCC_PREFIX)/gcc$(GCC_SUFFIX) --CPP = $(GCC_PREFIX)/g++$(GCC_SUFFIX) -+CC = cc -+CPP = c++ - CXX = $(CPP) - HEADERS = $(wildcard *.h) - BOWTIE_MM = 1 diff --git a/var/spack/packages/bowtie2/package.py b/var/spack/packages/bowtie2/package.py deleted file mode 100644 index 339aab6598..0000000000 --- a/var/spack/packages/bowtie2/package.py +++ /dev/null @@ -1,24 +0,0 @@ -from spack import * -from glob import glob -class Bowtie2(Package): - """Description""" - homepage = "bowtie-bio.sourceforge.net/bowtie2/index.shtml" - version('2.2.5','51fa97a862d248d7ee660efc1147c75f', url = "http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.5/bowtie2-2.2.5-source.zip") - - patch('bowtie2-2.5.patch',when='@2.2.5', level=0) - - def install(self, spec, prefix): - make() - mkdirp(prefix.bin) - for bow in glob("bowtie2*"): - install(bow, prefix.bin) - # install('bowtie2',prefix.bin) - # install('bowtie2-align-l',prefix.bin) - # install('bowtie2-align-s',prefix.bin) - # install('bowtie2-build',prefix.bin) - # install('bowtie2-build-l',prefix.bin) - # install('bowtie2-build-s',prefix.bin) - # install('bowtie2-inspect',prefix.bin) - # install('bowtie2-inspect-l',prefix.bin) - # install('bowtie2-inspect-s',prefix.bin) - diff --git a/var/spack/packages/boxlib/package.py b/var/spack/packages/boxlib/package.py deleted file mode 100644 index 4f1b71132f..0000000000 --- a/var/spack/packages/boxlib/package.py +++ /dev/null @@ -1,25 +0,0 @@ -from spack import * - -class Boxlib(Package): - """BoxLib, a software framework for massively parallel - block-structured adaptive mesh refinement (AMR) codes.""" - - homepage = "https://ccse.lbl.gov/BoxLib/" - url = "https://ccse.lbl.gov/pub/Downloads/BoxLib.git"; - - # TODO: figure out how best to version this. No tags in the repo! - version('master', git='https://ccse.lbl.gov/pub/Downloads/BoxLib.git') - - depends_on('mpi') - - def install(self, spec, prefix): - args = std_cmake_args - args += ['-DCCSE_ENABLE_MPI=1', - '-DCMAKE_C_COMPILER=%s' % which('mpicc'), - '-DCMAKE_CXX_COMPILER=%s' % which('mpicxx'), - '-DCMAKE_Fortran_COMPILER=%s' % which('mpif90')] - - cmake('.', *args) - make() - make("install") - diff --git a/var/spack/packages/bzip2/package.py b/var/spack/packages/bzip2/package.py deleted file mode 100644 index d88336664d..0000000000 --- a/var/spack/packages/bzip2/package.py +++ /dev/null @@ -1,36 +0,0 @@ -from spack import * -from glob import glob - -class Bzip2(Package): - """bzip2 is a freely available, patent free high-quality data - compressor. It typically compresses files to within 10% to 15% - of the best available techniques (the PPM family of statistical - compressors), whilst being around twice as fast at compression - and six times faster at decompression.""" - homepage = "http://www.bzip.org" - url = "http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz" - - version('1.0.6', '00b516f4704d4a7cb50a1d97e6e8e15b') - - def install(self, spec, prefix): - # No configure system -- have to filter the makefile for this package. - filter_file(r'CC=gcc', 'CC=cc', 'Makefile', string=True) - - make('-f', 'Makefile-libbz2_so') - make('clean') - make("install", "PREFIX=%s" % prefix) - - bzip2_exe = join_path(prefix.bin, 'bzip2') - install('bzip2-shared', bzip2_exe) - for i, libfile in enumerate(glob('libbz2.so*')): - install(libfile, prefix.lib) - if i == 0: - symlink(join_path(prefix.lib, libfile), join_path(prefix.lib, 'libbz2.so')) - - bunzip2 = join_path(prefix.bin, 'bunzip2') - remove(bunzip2) - symlink(bzip2_exe, bunzip2) - - bzcat = join_path(prefix.bin, 'bzcat') - remove(bzcat) - symlink(bzip2_exe, bzcat) diff --git a/var/spack/packages/cairo/package.py b/var/spack/packages/cairo/package.py deleted file mode 100644 index e1ac8aaa7d..0000000000 --- a/var/spack/packages/cairo/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Cairo(Package): - """Cairo is a 2D graphics library with support for multiple output devices.""" - homepage = "http://cairographics.org" - url = "http://cairographics.org/releases/cairo-1.14.0.tar.xz" - - version('1.14.0', 'fc3a5edeba703f906f2241b394f0cced') - - depends_on("libpng") - depends_on("glib") - depends_on("pixman") - depends_on("fontconfig@2.10.91:") # Require newer version of fontconfig. - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--enable-tee") - make() - make("install") diff --git a/var/spack/packages/callpath/package.py b/var/spack/packages/callpath/package.py deleted file mode 100644 index f8a1eab9f7..0000000000 --- a/var/spack/packages/callpath/package.py +++ /dev/null @@ -1,47 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Callpath(Package): - """Library for representing callpaths consistently in - distributed-memory performance tools.""" - - homepage = "https://github.com/scalability-llnl/callpath" - url = "https://github.com/scalability-llnl/callpath/archive/v1.0.1.tar.gz" - - version('1.0.2', 'b1994d5ee7c7db9d27586fc2dcf8f373') - version('1.0.1', '0047983d2a52c5c335f8ba7f5bab2325') - - depends_on("libelf") - depends_on("libdwarf") - depends_on("dyninst") - depends_on("adept-utils") - depends_on("mpi") - - def install(self, spec, prefix): - # TODO: offer options for the walker used. - cmake('.', "-DCALLPATH_WALKER=dyninst", *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/cblas/package.py b/var/spack/packages/cblas/package.py deleted file mode 100644 index 3cfe5ee588..0000000000 --- a/var/spack/packages/cblas/package.py +++ /dev/null @@ -1,35 +0,0 @@ -from spack import * -import os - -class Cblas(Package): - """The BLAS (Basic Linear Algebra Subprograms) are routines that - provide standard building blocks for performing basic vector and - matrix operations.""" - - homepage = "http://www.netlib.org/blas/_cblas/" - - # tarball has no version, but on the date below, this MD5 was correct. - version('2015-06-06', '1e8830f622d2112239a4a8a83b84209a', - url='http://www.netlib.org/blas/blast-forum/cblas.tgz') - - depends_on('blas') - parallel = False - - def patch(self): - mf = FileFilter('Makefile.in') - - mf.filter('^BLLIB =.*', 'BLLIB = %s/libblas.a' % self.spec['blas'].prefix.lib) - mf.filter('^CC =.*', 'CC = cc') - mf.filter('^FC =.*', 'FC = f90') - - - def install(self, spec, prefix): - make('all') - mkdirp(prefix.lib) - mkdirp(prefix.include) - - # Rename the generated lib file to libcblas.a - install('./lib/cblas_LINUX.a', '%s/libcblas.a' % prefix.lib) - install('./include/cblas.h','%s' % prefix.include) - install('./include/cblas_f77.h','%s' % prefix.include) - diff --git a/var/spack/packages/cgm/package.py b/var/spack/packages/cgm/package.py deleted file mode 100644 index 05d6395c5a..0000000000 --- a/var/spack/packages/cgm/package.py +++ /dev/null @@ -1,30 +0,0 @@ -from spack import * - -class Cgm(Package): - """The Common Geometry Module, Argonne (CGMA) is a code library - which provides geometry functionality used for mesh generation and - other applications.""" - homepage = "http://trac.mcs.anl.gov/projects/ITAPS/wiki/CGM" - url = "http://ftp.mcs.anl.gov/pub/fathom/cgm13.1.1.tar.gz" - - version('13.1.1', '4e8dbc4ba8f65767b29f985f7a23b01f') - version('13.1.0', 'a6c7b22660f164ce893fb974f9cb2028') - version('13.1' , '95f724bda04919fc76818a5b7bc0b4ed') - - depends_on("mpi") - - def patch(self): - filter_file('^(#include "CGMParallelConventions.h")', - '//\1', - 'geom/parallel/CGMReadParallel.cpp') - - - def install(self, spec, prefix): - configure("--with-mpi", - "--prefix=%s" % prefix, - "CFLAGS=-static", - "CXXFLAGS=-static", - "FCFLAGS=-static") - - make() - make("install") diff --git a/var/spack/packages/clang/package.py b/var/spack/packages/clang/package.py deleted file mode 100644 index 4f977bf9a4..0000000000 --- a/var/spack/packages/clang/package.py +++ /dev/null @@ -1,51 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Clang(Package): - """The goal of the Clang project is to create a new C, C++, - Objective C and Objective C++ front-end for the LLVM compiler. - """ - homepage = 'http://clang.llvm.org' - url = 'http://llvm.org/releases/3.7.0/cfe-3.7.0.src.tar.xz' - - depends_on('llvm@3.7.0', when='@3.7.0') - depends_on('llvm@3.6.2', when='@3.6.2') - depends_on('llvm@3.5.1', when='@3.5.1') - - version('3.7.0', '8f9d27335e7331cf0a4711e952f21f01', url='http://llvm.org/releases/3.7.0/cfe-3.7.0.src.tar.xz') - version('3.6.2', 'ff862793682f714bb7862325b9c06e20', url='http://llvm.org/releases/3.6.2/cfe-3.6.2.src.tar.xz') - version('3.5.1', '93f9532f8f7e6f1d8e5c1116907051cb', url='http://llvm.org/releases/3.5.1/cfe-3.5.1.src.tar.xz') - - def install(self, spec, prefix): - env['CXXFLAGS'] = self.compiler.cxx11_flag - - with working_dir('spack-build', create=True): - cmake('..', - '-DCLANG_PATH_TO_LLVM_BUILD=%s' % spec['llvm'].prefix, - '-DLLVM_MAIN_SRC_DIR=%s' % spec['llvm'].prefix, - *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/cloog/package.py b/var/spack/packages/cloog/package.py deleted file mode 100644 index 814a33c76c..0000000000 --- a/var/spack/packages/cloog/package.py +++ /dev/null @@ -1,26 +0,0 @@ -from spack import * - -class Cloog(Package): - """CLooG is a free software and library to generate code for - scanning Z-polyhedra. That is, it finds a code (e.g. in C, - FORTRAN...) that reaches each integral point of one or more - parameterized polyhedra.""" - - homepage = "http://www.cloog.org" - url = "http://www.bastoul.net/cloog/pages/download/count.php3?url=./cloog-0.18.1.tar.gz" - list_url = "http://www.bastoul.net/cloog/pages/download" - - version('0.18.1', 'e34fca0540d840e5d0f6427e98c92252') - version('0.18.0', 'be78a47bd82523250eb3e91646db5b3d') - version('0.17.0', '0aa3302c81f65ca62c114e5264f8a802') - - depends_on("gmp") - depends_on("isl") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--with-osl=no", - "--with-isl=%s" % spec['isl'].prefix, - "--with-gmp=%s" % spec['gmp'].prefix) - make() - make("install") diff --git a/var/spack/packages/cmake/package.py b/var/spack/packages/cmake/package.py deleted file mode 100644 index 9efa370c8b..0000000000 --- a/var/spack/packages/cmake/package.py +++ /dev/null @@ -1,45 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Cmake(Package): - """A cross-platform, open-source build system. CMake is a family of - tools designed to build, test and package software.""" - homepage = 'https://www.cmake.org' - - version('2.8.10.2', '097278785da7182ec0aea8769d06860c', - url = 'http://www.cmake.org/files/v2.8/cmake-2.8.10.2.tar.gz') - - version('3.0.2', 'db4c687a31444a929d2fdc36c4dfb95f', - url = 'http://www.cmake.org/files/v3.0/cmake-3.0.2.tar.gz') - -# version('3.0.1', 'e2e05d84cb44a42f1371d9995631dcf5') -# version('3.0.0', '21a1c85e1a3b803c4b48e7ff915a863e') - - def install(self, spec, prefix): - configure('--prefix=' + prefix, - '--parallel=' + str(make_jobs)) - make() - make('install') diff --git a/var/spack/packages/coreutils/package.py b/var/spack/packages/coreutils/package.py deleted file mode 100644 index 78c608d8eb..0000000000 --- a/var/spack/packages/coreutils/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Coreutils(Package): - """The GNU Core Utilities are the basic file, shell and text - manipulation utilities of the GNU operating system. These are - the core utilities which are expected to exist on every - operating system. - """ - homepage = "http://www.gnu.org/software/coreutils/" - url = "http://ftp.gnu.org/gnu/coreutils/coreutils-8.23.tar.xz" - - version('8.23', 'abed135279f87ad6762ce57ff6d89c41') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/cppcheck/package.py b/var/spack/packages/cppcheck/package.py deleted file mode 100644 index 8e98f457ee..0000000000 --- a/var/spack/packages/cppcheck/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class Cppcheck(Package): - """A tool for static C/C++ code analysis.""" - homepage = "http://cppcheck.sourceforge.net/" - url = "http://downloads.sourceforge.net/project/cppcheck/cppcheck/1.68/cppcheck-1.68.tar.bz2" - - version('1.68', 'c015195f5d61a542f350269030150708') - - def install(self, spec, prefix): - # cppcheck does not have a configure script - make() - # manually install the final cppcheck binary - mkdirp(prefix.bin) - install('cppcheck', prefix.bin) diff --git a/var/spack/packages/cram/package.py b/var/spack/packages/cram/package.py deleted file mode 100644 index 4b8ec56f25..0000000000 --- a/var/spack/packages/cram/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class Cram(Package): - """Cram runs many small MPI jobs inside one large MPI job.""" - homepage = "https://github.com/scalability-llnl/cram" - url = "http://github.com/scalability-llnl/cram/archive/v1.0.1.tar.gz" - - version('1.0.1', 'c73711e945cf5dc603e44395f6647f5e') - - depends_on("mpi") - - def install(self, spec, prefix): - cmake(".", *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/cscope/package.py b/var/spack/packages/cscope/package.py deleted file mode 100644 index 9aac0f7304..0000000000 --- a/var/spack/packages/cscope/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Cscope(Package): - """Cscope is a developer's tool for browsing source code.""" - homepage = "http://http://cscope.sourceforge.net/" - url = "http://downloads.sourceforge.net/project/cscope/cscope/15.8b/cscope-15.8b.tar.gz" - - version('15.8b', '8f9409a238ee313a96f9f87fe0f3b176') - - # Can be configured to use flex (not necessary) - # ./configure --with-flex - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix) - - make() - make("install") diff --git a/var/spack/packages/cube/package.py b/var/spack/packages/cube/package.py deleted file mode 100644 index d97cd25636..0000000000 --- a/var/spack/packages/cube/package.py +++ /dev/null @@ -1,55 +0,0 @@ -# FIXME: Add copyright statement -# -from spack import * -from contextlib import closing - -class Cube(Package): - """Cube the profile viewer for Score-P and Scalasca profiles. It - displays a multi-dimensional performance space consisting - of the dimensions (i) performance metric, (ii) call path, - and (iii) system resource.""" - - homepage = "http://www.scalasca.org/software/cube-4.x/download.html" - url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.2/dist/cube-4.2.3.tar.gz" - - version('4.2.3', '8f95b9531f5a8f8134f279c2767c9b20') - - version('4.3TP1', 'a2090fbc7b2ba394bd5c09ba971e237f', - url = 'http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-4.3-TP1.tar.gz') - - # Using CC as C++ compiler provides quirky workaround for a Score-P build system attempt - # to guess a matching C compiler when configuring scorep-score - backend_user_provided = """\ -CC=cc -CXX=CC -F77=f77 -FC=f90 -#CFLAGS=-fPIC -#CXXFLAGS=-fPIC -""" - frontend_user_provided = """\ -CC_FOR_BUILD=cc -CXX_FOR_BUILD=CC -F77_FOR_BUILD=f70 -FC_FOR_BUILD=f90 -""" - - def install(self, spec, prefix): - # Use a custom compiler configuration, otherwise the score-p - # build system messes with spack's compiler settings. - # Create these three files in the build directory - - with closing(open("vendor/common/build-config/platforms/platform-backend-user-provided", "w")) as backend_file: - backend_file.write(self.backend_user_provided) - with closing(open("vendor/common/build-config/platforms/platform-frontend-user-provided", "w")) as frontend_file: - frontend_file.write(self.frontend_user_provided) - - configure_args = ["--prefix=%s" % prefix, - "--with-custom-compilers", - "--without-paraver", - "--without-gui"] - - configure(*configure_args) - - make(parallel=False) - make("install", parallel=False) diff --git a/var/spack/packages/czmq/package.py b/var/spack/packages/czmq/package.py deleted file mode 100644 index a2f1947554..0000000000 --- a/var/spack/packages/czmq/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Czmq(Package): - """ A C interface to the ZMQ library """ - homepage = "http://czmq.zeromq.org" - url = "https://github.com/zeromq/czmq/archive/v3.0.2.tar.gz" - - version('3.0.2', '23e9885f7ee3ce88d99d0425f52e9be1', url='https://github.com/zeromq/czmq/archive/v3.0.2.tar.gz') - - depends_on('zeromq') - - def install(self, spec, prefix): - bash = which("bash") - bash("./autogen.sh") - configure("--prefix=%s" % prefix) - - make() - make("install") - diff --git a/var/spack/packages/dbus/package.py b/var/spack/packages/dbus/package.py deleted file mode 100644 index f7c302d611..0000000000 --- a/var/spack/packages/dbus/package.py +++ /dev/null @@ -1,31 +0,0 @@ -from spack import * - -class Dbus(Package): - """D-Bus is a message bus system, a simple way for applications to - talk to one another. D-Bus supplies both a system daemon (for - events such new hardware device printer queue ) and a - per-user-login-session daemon (for general IPC needs among user - applications). Also, the message bus is built on top of a - general one-to-one message passing framework, which can be used - by any two applications to communicate directly (without going - through the message bus daemon).""" - - homepage = "http://dbus.freedesktop.org/" - url = "http://dbus.freedesktop.org/releases/dbus/dbus-1.8.8.tar.gz" - - version('1.9.0', 'ec6895a4d5c0637b01f0d0e7689e2b36') - version('1.8.8', 'b9f4a18ee3faa1e07c04aa1d83239c43') - version('1.8.6', '6a08ba555d340e9dfe2d623b83c0eea8') - version('1.8.4', '4717cb8ab5b80978fcadf2b4f2f72e1b') - version('1.8.2', 'd6f709bbec0a022a1847c7caec9d6068') - - def install(self, spec, prefix): - configure( - "--prefix=%s" % prefix, - "--disable-systemd") - make() - make("install") - - # dbus needs a machine id generated after install - dbus_uuidgen = Executable(join_path(prefix.bin, 'dbus-uuidgen')) - dbus_uuidgen('--ensure') diff --git a/var/spack/packages/docbook-xml/package.py b/var/spack/packages/docbook-xml/package.py deleted file mode 100644 index fce1de7deb..0000000000 --- a/var/spack/packages/docbook-xml/package.py +++ /dev/null @@ -1,19 +0,0 @@ -import os -import glob -from spack import * - - -class DocbookXml(Package): - """Docbook DTD XML files.""" - homepage = "http://www.oasis-open.org/docbook" - url = "http://www.oasis-open.org/docbook/xml/4.5/docbook-xml-4.5.zip" - - version('4.5', '03083e288e87a7e829e437358da7ef9e') - - def install(self, spec, prefix): - cp = which('cp') - - install_args = ['-a', '-t', prefix] - install_args.extend(glob.glob('*')) - - cp(*install_args) diff --git a/var/spack/packages/doxygen/package.py b/var/spack/packages/doxygen/package.py deleted file mode 100644 index 3d4a4e47a7..0000000000 --- a/var/spack/packages/doxygen/package.py +++ /dev/null @@ -1,25 +0,0 @@ -#------------------------------------------------------------------------------ -# Author: Justin Too <justin@doubleotoo.com> -# Date: September 11, 2015 -#------------------------------------------------------------------------------ - -from spack import * - -class Doxygen(Package): - """Doxygen is the de facto standard tool for generating documentation - from annotated C++ sources, but it also supports other popular programming - languages such as C, Objective-C, C#, PHP, Java, Python, IDL (Corba, - Microsoft, and UNO/OpenOffice flavors), Fortran, VHDL, Tcl, and to some extent D.. - """ - homepage = "http://www.stack.nl/~dimitri/doxygen/" - url = "http://ftp.stack.nl/pub/users/dimitri/doxygen-1.8.10.src.tar.gz" - - version('1.8.10', '79767ccd986f12a0f949015efb5f058f') - - depends_on("cmake@2.8.12:") - - def install(self, spec, prefix): - cmake('.', *std_cmake_args) - - make() - make("install") diff --git a/var/spack/packages/dri2proto/package.py b/var/spack/packages/dri2proto/package.py deleted file mode 100644 index 11dfa568e2..0000000000 --- a/var/spack/packages/dri2proto/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class Dri2proto(Package): - """DRI2 Protocol Headers.""" - homepage = "http://http://cgit.freedesktop.org/xorg/proto/dri2proto/" - url = "http://xorg.freedesktop.org/releases/individual/proto/dri2proto-2.8.tar.gz" - - version('2.8', '19ea18f63d8ae8053c9fa84b60365b77') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/dtcmp/package.py b/var/spack/packages/dtcmp/package.py deleted file mode 100644 index 9d940583c1..0000000000 --- a/var/spack/packages/dtcmp/package.py +++ /dev/null @@ -1,20 +0,0 @@ -import os -from spack import * - -class Dtcmp(Package): - """The Datatype Comparison Library provides comparison operations and - parallel sort algorithms for MPI applications.""" - - homepage = "https://github.com/hpc/dtcmp" - url = "https://github.com/hpc/dtcmp/releases/download/v1.0.3/dtcmp-1.0.3.tar.gz" - - version('1.0.3', 'cdd8ccf71e8ff67de2558594a7fcd317') - - depends_on('mpi') - depends_on('lwgrp') - - def install(self, spec, prefix): - configure("--prefix=" + prefix, - "--with-lwgrp=" + spec['lwgrp'].prefix) - make() - make("install") diff --git a/var/spack/packages/dyninst/package.py b/var/spack/packages/dyninst/package.py deleted file mode 100644 index 41ec57dd2f..0000000000 --- a/var/spack/packages/dyninst/package.py +++ /dev/null @@ -1,68 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Dyninst(Package): - """API for dynamic binary instrumentation. Modify programs while they - are executing without recompiling, re-linking, or re-executing.""" - homepage = "https://paradyn.org" - url = "http://www.dyninst.org/sites/default/files/downloads/dyninst/8.1.2/DyninstAPI-8.1.2.tgz" - list_url = "http://www.dyninst.org/downloads/dyninst-8.x" - - version('8.2.1', 'abf60b7faabe7a2e4b54395757be39c7', - url="http://www.paradyn.org/release8.2/DyninstAPI-8.2.1.tgz") - version('8.1.2', 'bf03b33375afa66fe0efa46ce3f4b17a', - url="http://www.paradyn.org/release8.1.2/DyninstAPI-8.1.2.tgz") - version('8.1.1', 'd1a04e995b7aa70960cd1d1fac8bd6ac', - url="http://www.paradyn.org/release8.1/DyninstAPI-8.1.1.tgz") - - depends_on("libelf") - depends_on("libdwarf") - depends_on("boost@1.42:") - - # new version uses cmake - def install(self, spec, prefix): - libelf = spec['libelf'].prefix - libdwarf = spec['libdwarf'].prefix - - with working_dir('spack-build', create=True): - cmake('..', - '-DBoost_INCLUDE_DIR=%s' % spec['boost'].prefix.include, - '-DBoost_LIBRARY_DIR=%s' % spec['boost'].prefix.lib, - '-DBoost_NO_SYSTEM_PATHS=TRUE', - '-DLIBELF_INCLUDE_DIR=%s' % join_path(libelf.include, 'libelf'), - '-DLIBELF_LIBRARIES=%s' % join_path(libelf.lib, 'libelf.so'), - '-DLIBDWARF_INCLUDE_DIR=%s' % libdwarf.include, - '-DLIBDWARF_LIBRARIES=%s' % join_path(libdwarf.lib, 'libdwarf.so'), - *std_cmake_args) - make() - make("install") - - - @when('@:8.1') - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/elfutils/package.py b/var/spack/packages/elfutils/package.py deleted file mode 100644 index 926d234584..0000000000 --- a/var/spack/packages/elfutils/package.py +++ /dev/null @@ -1,26 +0,0 @@ -from spack import * - -class Elfutils(Package): - """elfutils is a collection of various binary tools such as - eu-objdump, eu-readelf, and other utilities that allow you to - inspect and manipulate ELF files. Refer to Table 5.Tools Included - in elfutils for Red Hat Developer for a complete list of binary - tools that are distributed with the Red Hat Developer Toolset - version of elfutils.""" - - homepage = "https://fedorahosted.org/elfutils/" - - version('0.163', - git='git://git.fedorahosted.org/git/elfutils.git', - tag='elfutils-0.163') - - provides('elf') - - def install(self, spec, prefix): - autoreconf = which('autoreconf') - autoreconf('-if') - - configure('--prefix=%s' % prefix, '--enable-maintainer-mode') - make() - make("install") - diff --git a/var/spack/packages/extrae/package.py b/var/spack/packages/extrae/package.py deleted file mode 100644 index 3ad4cbaf86..0000000000 --- a/var/spack/packages/extrae/package.py +++ /dev/null @@ -1,46 +0,0 @@ -from spack import * - -# typical working line with extrae 3.0.1 -# ./configure --prefix=/usr/local --with-mpi=/usr/lib64/mpi/gcc/openmpi --with-unwind=/usr/local --with-papi=/usr --with-dwarf=/usr --with-elf=/usr --with-dyninst=/usr --with-binutils=/usr --with-xml-prefix=/usr --enable-openmp --enable-nanos --enable-pthread --disable-parallel-merge LDFLAGS=-pthread - -class Extrae(Package): - """Extrae is the package devoted to generate tracefiles which can - be analyzed later by Paraver. Extrae is a tool that uses - different interposition mechanisms to inject probes into the - target application so as to gather information regarding the - application performance. The Extrae instrumentation package can - instrument the MPI programin model, and the following parallel - programming models either alone or in conjunction with MPI : - OpenMP, CUDA, OpenCL, pthread, OmpSs""" - homepage = "http://www.bsc.es/computer-sciences/extrae" - url = "http://www.bsc.es/ssl/apps/performanceTools/files/extrae-3.0.1.tar.bz2" - version('3.0.1', 'a6a8ca96cd877723cd8cc5df6bdb922b') - - depends_on("mpi") - depends_on("dyninst") - depends_on("libunwind") - depends_on("boost") - depends_on("libdwarf") - depends_on("papi") - - def install(self, spec, prefix): - if 'openmpi' in spec: - mpi = spec['openmpi'] - elif 'mpich' in spec: - mpi = spec['mpich'] - elif 'mvapich2' in spec: - mpi = spec['mvapich2'] - - configure("--prefix=%s" % prefix, - "--with-mpi=%s" % mpi.prefix, - "--with-unwind=%s" % spec['libunwind'].prefix, - "--with-dyninst=%s" % spec['dyninst'].prefix, - "--with-boost=%s" % spec['boost'].prefix, - "--with-dwarf=%s" % spec['libdwarf'].prefix, - "--with-papi=%s" % spec['papi'].prefix, - "--with-dyninst-headers=%s" % spec['dyninst'].prefix.include, - "--with-dyninst-libs=%s" % spec['dyninst'].prefix.lib) - - make() - make("install", parallel=False) - diff --git a/var/spack/packages/exuberant-ctags/package.py b/var/spack/packages/exuberant-ctags/package.py deleted file mode 100644 index efd2b541b2..0000000000 --- a/var/spack/packages/exuberant-ctags/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class ExuberantCtags(Package): - """The canonical ctags generator""" - homepage = "ctags.sourceforge.net" - url = "http://downloads.sourceforge.net/project/ctags/ctags/5.8/ctags-5.8.tar.gz" - - version('5.8', 'c00f82ecdcc357434731913e5b48630d') - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix) - - make() - make("install") diff --git a/var/spack/packages/fish/package.py b/var/spack/packages/fish/package.py deleted file mode 100644 index 1225558705..0000000000 --- a/var/spack/packages/fish/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Fish(Package): - """fish is a smart and user-friendly command line shell for OS X, Linux, and - the rest of the family. - """ - - homepage = "http://fishshell.com/" - url = "http://fishshell.com/files/2.2.0/fish-2.2.0.tar.gz" - list_url = homepage - - version('2.2.0', 'a76339fd14ce2ec229283c53e805faac48c3e99d9e3ede9d82c0554acfc7b77a') - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix) - - make() - make("install") diff --git a/var/spack/packages/flex/package.py b/var/spack/packages/flex/package.py deleted file mode 100644 index b065904912..0000000000 --- a/var/spack/packages/flex/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class Flex(Package): - """Flex is a tool for generating scanners.""" - - homepage = "http://flex.sourceforge.net/" - url = "http://download.sourceforge.net/flex/flex-2.5.39.tar.gz" - - version('2.5.39', 'e133e9ead8ec0a58d81166b461244fde') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/flux/package.py b/var/spack/packages/flux/package.py deleted file mode 100644 index c128f46be8..0000000000 --- a/var/spack/packages/flux/package.py +++ /dev/null @@ -1,36 +0,0 @@ -from spack import * -import os - -class Flux(Package): - """ A next-generation resource manager (pre-alpha) """ - - homepage = "https://github.com/flux-framework/flux-core" - url = "https://github.com/flux-framework/flux-core" - - version('master', branch='master', git='https://github.com/flux-framework/flux-core') - - # Also needs autotools, but should use the system version if available - depends_on("zeromq@4.0.4:") - depends_on("czmq@2.2:") - depends_on("lua@5.1:5.1.99") - depends_on("munge") - depends_on("libjson-c") - depends_on("libxslt") - # TODO: This provides a catalog, hacked with environment below for now - depends_on("docbook-xml") - depends_on("asciidoc") - depends_on("python") - depends_on("py-cffi") - - def install(self, spec, prefix): - # Bootstrap with autotools - bash = which('bash') - bash('./autogen.sh') - - # Fix asciidoc dependency on xml style sheets and whatnot - os.environ['XML_CATALOG_FILES'] = os.path.join(spec['docbook-xml'].prefix, - 'catalog.xml') - # Configure, compile & install - configure("--prefix=" + prefix) - make("install", "V=1") - diff --git a/var/spack/packages/fontconfig/package.py b/var/spack/packages/fontconfig/package.py deleted file mode 100644 index 89b13604e8..0000000000 --- a/var/spack/packages/fontconfig/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Fontconfig(Package): - """Fontconfig customizing font access""" - homepage = "http://www.freedesktop.org/wiki/Software/fontconfig/" - url = "http://www.freedesktop.org/software/fontconfig/release/fontconfig-2.11.1.tar.gz" - - version('2.11.1' , 'e75e303b4f7756c2b16203a57ac87eba') - - depends_on('freetype') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/freetype/package.py b/var/spack/packages/freetype/package.py deleted file mode 100644 index 0309b858a1..0000000000 --- a/var/spack/packages/freetype/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Freetype(Package): - """Font package""" - homepage = "http://http://www.freetype.org" - url = "http://download.savannah.gnu.org/releases/freetype/freetype-2.5.3.tar.gz" - - version('2.5.3' , 'cafe9f210e45360279c730d27bf071e9') - - depends_on('libpng') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/gasnet/package.py b/var/spack/packages/gasnet/package.py deleted file mode 100644 index 705961d1de..0000000000 --- a/var/spack/packages/gasnet/package.py +++ /dev/null @@ -1,35 +0,0 @@ -from spack import * - -class Gasnet(Package): - """GASNet is a language-independent, low-level networking layer - that provides network-independent, high-performance communication - primitives tailored for implementing parallel global address space - SPMD languages and libraries such as UPC, Co-Array Fortran, SHMEM, - Cray Chapel, and Titanium. - """ - homepage = "http://gasnet.lbl.gov" - url = "http://gasnet.lbl.gov/GASNet-1.24.0.tar.gz" - - version('1.24.0', 'c8afdf48381e8b5a7340bdb32ca0f41a') - - - def install(self, spec, prefix): - # TODO: don't use paths with @ in them. - change_sed_delimiter('@', ';', 'configure') - - configure("--prefix=%s" % prefix, - # TODO: factor IB suport out into architecture description. - "--enable-ibv", - "--enable-udp", - "--disable-mpi", - "--enable-par", - "--enable-mpi-compat", - "--enable-segment-fast", - "--disable-aligned-segments", - # TODO: make an option so that Legion can request builds with/without this. - # See the Legion webpage for details on when to/not to use. - "--disable-pshm", - "--with-segment-mmap-max=64MB") - - make() - make("install") diff --git a/var/spack/packages/gcc/package.py b/var/spack/packages/gcc/package.py deleted file mode 100644 index a49a1348aa..0000000000 --- a/var/spack/packages/gcc/package.py +++ /dev/null @@ -1,122 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -from contextlib import closing -from glob import glob - -class Gcc(Package): - """The GNU Compiler Collection includes front ends for C, C++, - Objective-C, Fortran, and Java.""" - homepage = "https://gcc.gnu.org" - - url = "http://open-source-box.org/gcc/gcc-4.9.2/gcc-4.9.2.tar.bz2" - list_url = 'http://open-source-box.org/gcc/' - list_depth = 2 - - DEPENDS_ON_ISL_PREDICATE = '@5.0:' - - version('5.2.0', 'a51bcfeb3da7dd4c623e27207ed43467') - version('4.9.3', '6f831b4d251872736e8e9cc09746f327') - version('4.9.2', '4df8ee253b7f3863ad0b86359cd39c43') - version('4.9.1', 'fddf71348546af523353bd43d34919c1') - version('4.8.5', '80d2c2982a3392bb0b89673ff136e223') - version('4.8.4', '5a84a30839b2aca22a2d723de2a626ec') - version('4.7.4', '4c696da46297de6ae77a82797d2abe28') - version('4.6.4', 'b407a3d1480c11667f293bfb1f17d1a4') - version('4.5.4', '27e459c2566b8209ab064570e1b378f7') - - depends_on("mpfr") - depends_on("gmp") - depends_on("mpc") # when @4.5: - depends_on("binutils~libiberty") - - # Save these until we can do optional deps. - depends_on("isl", when=DEPENDS_ON_ISL_PREDICATE) - #depends_on("ppl") - #depends_on("cloog") - - def install(self, spec, prefix): - # libjava/configure needs a minor fix to install into spack paths. - filter_file(r"'@.*@'", "'@[[:alnum:]]*@'", 'libjava/configure', string=True) - - enabled_languages = set(('c', 'c++', 'fortran', 'java', 'objc')) - if spec.satisfies("@4.7.1:"): - enabled_languages.add('go') - - # Generic options to compile GCC - options = ["--prefix=%s" % prefix, - "--libdir=%s/lib64" % prefix, - "--disable-multilib", - "--enable-languages=" + ','.join(enabled_languages), - "--with-mpc=%s" % spec['mpc'].prefix, - "--with-mpfr=%s" % spec['mpfr'].prefix, - "--with-gmp=%s" % spec['gmp'].prefix, - "--enable-lto", - "--with-gnu-ld", - "--with-gnu-as", - "--with-quad"] - # Binutils - binutils_options = ["--with-stage1-ldflags=%s" % self.rpath_args, - "--with-boot-ldflags=%s" % self.rpath_args, - "--with-ld=%s/bin/ld" % spec['binutils'].prefix, - "--with-as=%s/bin/as" % spec['binutils'].prefix] - options.extend(binutils_options) - # Isl - if spec.satisfies(Gcc.DEPENDS_ON_ISL_PREDICATE): - isl_options = ["--with-isl=%s" % spec['isl'].prefix] - options.extend(isl_options) - - # Rest of install is straightforward. - configure(*options) - make() - make("install") - - self.write_rpath_specs() - - - @property - def spec_dir(self): - # e.g. lib64/gcc/x86_64-unknown-linux-gnu/4.9.2 - spec_dir = glob("%s/lib64/gcc/*/*" % self.prefix) - return spec_dir[0] if spec_dir else None - - - def write_rpath_specs(self): - """Generate a spec file so the linker adds a rpath to the libs - the compiler used to build the executable.""" - if not self.spec_dir: - tty.warn("Could not install specs for %s." % self.spec.format('$_$@')) - return - - gcc = Executable(join_path(self.prefix.bin, 'gcc')) - lines = gcc('-dumpspecs', return_output=True).strip().split("\n") - specs_file = join_path(self.spec_dir, 'specs') - with closing(open(specs_file, 'w')) as out: - for line in lines: - out.write(line + "\n") - if line.startswith("*link:"): - out.write("-rpath %s/lib:%s/lib64 \\\n"% (self.prefix, self.prefix)) - set_install_permissions(specs_file) diff --git a/var/spack/packages/gdk-pixbuf/package.py b/var/spack/packages/gdk-pixbuf/package.py deleted file mode 100644 index 14a5569984..0000000000 --- a/var/spack/packages/gdk-pixbuf/package.py +++ /dev/null @@ -1,22 +0,0 @@ -from spack import * - -class GdkPixbuf(Package): - """The Gdk Pixbuf is a toolkit for image loading and pixel buffer - manipulation. It is used by GTK+ 2 and GTK+ 3 to load and - manipulate images. In the past it was distributed as part of - GTK+ 2 but it was split off into a separate package in - preparation for the change to GTK+ 3.""" - homepage = "https://developer.gnome.org/gdk-pixbuf/" - url = "http://ftp.gnome.org/pub/gnome/sources/gdk-pixbuf/2.31/gdk-pixbuf-2.31.1.tar.xz" - - version('2.31.2', '6be6bbc4f356d4b79ab4226860ab8523') - - depends_on("glib") - depends_on("jpeg") - depends_on("libpng") - depends_on("libtiff") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/geos/package.py b/var/spack/packages/geos/package.py deleted file mode 100644 index 4a2657e32f..0000000000 --- a/var/spack/packages/geos/package.py +++ /dev/null @@ -1,31 +0,0 @@ -from spack import * - -class Geos(Package): - """GEOS (Geometry Engine - Open Source) is a C++ port of the Java - Topology Suite (JTS). As such, it aims to contain the complete - functionality of JTS in C++. This includes all the OpenGIS - Simple Features for SQL spatial predicate functions and spatial - operators, as well as specific JTS enhanced topology functions.""" - - homepage = "http://trac.osgeo.org/geos/" - url = "http://download.osgeo.org/geos/geos-3.4.2.tar.bz2" - - version('3.4.2', 'fc5df2d926eb7e67f988a43a92683bae') - version('3.4.1', '4c930dec44c45c49cd71f3e0931ded7e') - version('3.4.0', 'e41318fc76b5dc764a69d43ac6b18488') - version('3.3.9', '4794c20f07721d5011c93efc6ccb8e4e') - version('3.3.8', '75be476d0831a2d14958fed76ca266de') - version('3.3.7', '95ab996d22672b067d92c7dee2170460') - version('3.3.6', '6fadfb941541875f4976f75fb0bbc800') - version('3.3.5', '2ba61afb7fe2c5ddf642d82d7b16e75b') - version('3.3.4', '1bb9f14d57ef06ffa41cb1d67acb55a1') - version('3.3.3', '8454e653d7ecca475153cc88fd1daa26') - - extends('python') - depends_on('swig') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--enable-python") - make() - make("install") diff --git a/var/spack/packages/gflags/package.py b/var/spack/packages/gflags/package.py deleted file mode 100644 index 62dd80a094..0000000000 --- a/var/spack/packages/gflags/package.py +++ /dev/null @@ -1,21 +0,0 @@ -import os -from spack import * - -class Gflags(Package): - """The gflags package contains a C++ library that implements - commandline flags processing. It includes built-in support for - standard types such as string and the ability to define flags - in the source file in which they are used. Online documentation - available at: https://gflags.github.io/gflags/""" - - homepage = "https://gflags.github.io/gflags" - url = "https://github.com/gflags/gflags/archive/v2.1.2.tar.gz" - - version('2.1.2', 'ac432de923f9de1e9780b5254884599f') - - def install(self, spec, prefix): - cmake("-DCMAKE_INSTALL_PREFIX=" + prefix, - "-DBUILD_SHARED_LIBS=ON") - make() - make("test") - make("install") diff --git a/var/spack/packages/ghostscript/package.py b/var/spack/packages/ghostscript/package.py deleted file mode 100644 index 0ab49d425f..0000000000 --- a/var/spack/packages/ghostscript/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Ghostscript(Package): - """an interpreter for the PostScript language and for PDF. """ - homepage = "http://ghostscript.com/" - url = "http://downloads.ghostscript.com/public/ghostscript-9.16.tar.gz" - - version('9.16', '829319325bbdb83f5c81379a8f86f38f') - - parallel = False - - def install(self, spec, prefix): - configure("--prefix=%s" %prefix, "--enable-shared") - - make() - make("install") - diff --git a/var/spack/packages/git/package.py b/var/spack/packages/git/package.py deleted file mode 100644 index 0f1a3ba05b..0000000000 --- a/var/spack/packages/git/package.py +++ /dev/null @@ -1,27 +0,0 @@ -from spack import * - -class Git(Package): - """Git is a free and open source distributed version control - system designed to handle everything from small to very large - projects with speed and efficiency.""" - homepage = "http://git-scm.com" - url = "https://www.kernel.org/pub/software/scm/git/git-2.2.1.tar.xz" - - version('2.2.1', '43e01f9d96ba8c11611e0eef0d9f9f28') - - # Use system openssl. - # depends_on("openssl") - - # Use system perl for now. - # depends_on("perl") - # depends_on("pcre") - - depends_on("zlib") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--without-pcre", - "--without-python") - - make() - make("install") diff --git a/var/spack/packages/glib/package.py b/var/spack/packages/glib/package.py deleted file mode 100644 index 178f0b9df5..0000000000 --- a/var/spack/packages/glib/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Glib(Package): - """The GLib package contains a low-level libraries useful for - providing data structure handling for C, portability wrappers - and interfaces for such runtime functionality as an event loop, - threads, dynamic loading and an object system.""" - homepage = "https://developer.gnome.org/glib/" - url = "http://ftp.gnome.org/pub/gnome/sources/glib/2.42/glib-2.42.1.tar.xz" - - version('2.42.1', '89c4119e50e767d3532158605ee9121a') - - depends_on("libffi") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/glm/package.py b/var/spack/packages/glm/package.py deleted file mode 100644 index d00c301b4c..0000000000 --- a/var/spack/packages/glm/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - - -class Glm(Package): - """ - OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics software based on - the OpenGL Shading Language (GLSL) specification. - """ - - homepage = "https://github.com/g-truc/glm" - url = "https://github.com/g-truc/glm/archive/0.9.7.1.tar.gz" - - version('0.9.7.1', '61af6639cdf652d1cdd7117190afced8') - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('..', *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/global/package.py b/var/spack/packages/global/package.py deleted file mode 100644 index a77b1bdc09..0000000000 --- a/var/spack/packages/global/package.py +++ /dev/null @@ -1,24 +0,0 @@ -from spack import * -import os - - -class Global(Package): - """ The Gnu Global tagging system """ - # FIXME: add a proper url for your package's homepage here. - homepage = "http://www.gnu.org/software/global" - url = "http://tamacom.com/global/global-6.5.tar.gz" - - version('6.5', 'dfec818b4f53d91721e247cf7b218078') - - depends_on('exuberant-ctags') - - def install(self, spec, prefix): - config_args = ['--prefix={}'.format(prefix)] - - config_args.append('--with-exuberant-ctags={}'.format( - os.path.join(spec['exuberant-ctags'].prefix.bin, 'ctags'))) - - configure(*config_args) - - make() - make("install") diff --git a/var/spack/packages/glog/package.py b/var/spack/packages/glog/package.py deleted file mode 100644 index d73386b394..0000000000 --- a/var/spack/packages/glog/package.py +++ /dev/null @@ -1,15 +0,0 @@ -import os -from spack import * - -class Glog(Package): - """C++ implementation of the Google logging module.""" - - homepage = "https://github.com/google/glog" - url = "https://github.com/google/glog/archive/v0.3.3.tar.gz" - - version('0.3.3', 'c1f86af27bd9c73186730aa957607ed0') - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/gmp/package.py b/var/spack/packages/gmp/package.py deleted file mode 100644 index d6af821b34..0000000000 --- a/var/spack/packages/gmp/package.py +++ /dev/null @@ -1,40 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Gmp(Package): - """GMP is a free library for arbitrary precision arithmetic, - operating on signed integers, rational numbers, and - floating-point numbers.""" - homepage = "https://gmplib.org" - url = "https://gmplib.org/download/gmp/gmp-6.0.0a.tar.bz2" - - version('6.0.0a', 'b7ff2d88cae7f8085bd5006096eed470') - version('6.0.0' , '6ef5869ae735db9995619135bd856b84') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/gnutls/package.py b/var/spack/packages/gnutls/package.py deleted file mode 100644 index cf57a24a6d..0000000000 --- a/var/spack/packages/gnutls/package.py +++ /dev/null @@ -1,22 +0,0 @@ -from spack import * - -class Gnutls(Package): - """GnuTLS is a secure communications library implementing the SSL, - TLS and DTLS protocols and technologies around them. It - provides a simple C language application programming interface - (API) to access the secure communications protocols as well as - APIs to parse and write X.509, PKCS #12, OpenPGP and other - required structures. It is aimed to be portable and efficient - with focus on security and interoperability.""" - - homepage = "http://www.gnutls.org" - url = "ftp://ftp.gnutls.org/gcrypt/gnutls/v3.3/gnutls-3.3.9.tar.xz" - - version('3.3.9', 'ff61b77e39d09f1140ab5a9cf52c58b6') - - depends_on("nettle") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/gperf/package.py b/var/spack/packages/gperf/package.py deleted file mode 100644 index 32551b67b4..0000000000 --- a/var/spack/packages/gperf/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Gperf(Package): - """GNU gperf is a perfect hash function generator. For a given - list of strings, it produces a hash function and hash table, in - form of C or C++ code, for looking up a value depending on the - input string. The hash function is perfect, which means that the - hash table has no collisions, and the hash table lookup needs a - single string comparison only.""" - - homepage = "https://www.gnu.org/software/gperf/" - url = "http://ftp.gnu.org/pub/gnu/gperf/gperf-3.0.4.tar.gz" - - version('3.0.4', 'c1f1db32fb6598d6a93e6e88796a8632') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/gperftools/package.py b/var/spack/packages/gperftools/package.py deleted file mode 100644 index 8900462324..0000000000 --- a/var/spack/packages/gperftools/package.py +++ /dev/null @@ -1,38 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Gperftools(Package): - """Google's fast malloc/free implementation, especially for multi-threaded applications. - Contains tcmalloc, heap-checker, heap-profiler, and cpu-profiler.""" - homepage = "https://code.google.com/p/gperftools" - url = "https://googledrive.com/host/0B6NtGsLhIcf7MWxMMF9JdTN3UVk/gperftools-2.3.tar.gz" - - version('2.3', 'f54dd119f0e46ac1f13264f8d97adf90', url="https://googledrive.com/host/0B6NtGsLhIcf7MWxMMF9JdTN3UVk/gperftools-2.3.tar.gz") - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/graphlib/package.py b/var/spack/packages/graphlib/package.py deleted file mode 100644 index ddac0b2b66..0000000000 --- a/var/spack/packages/graphlib/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class Graphlib(Package): - """Library to create, manipulate, and export graphs Graphlib.""" - homepage = "http://https://github.com/lee218llnl/graphlib" - url = "https://github.com/lee218llnl/graphlib/archive/v2.0.0.tar.gz" - - version('2.0.0', '43c6df84f1d38ba5a5dce0ae19371a70') - - def install(self, spec, prefix): - cmake(".", *std_cmake_args) - - make() - make("install") diff --git a/var/spack/packages/graphviz/package.py b/var/spack/packages/graphviz/package.py deleted file mode 100644 index 7af7da1881..0000000000 --- a/var/spack/packages/graphviz/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * - -class Graphviz(Package): - """Graph Visualization Software""" - homepage = "http://www.graphviz.org" - url = "http://www.graphviz.org/pub/graphviz/stable/SOURCES/graphviz-2.38.0.tar.gz" - - version('2.38.0', '5b6a829b2ac94efcd5fa3c223ed6d3ae') - - parallel = False - - depends_on("swig") - depends_on("python") - depends_on("ghostscript") - - def install(self, spec, prefix): - configure("--prefix=%s" %prefix) - - make() - make("install") - diff --git a/var/spack/packages/gtkplus/package.py b/var/spack/packages/gtkplus/package.py deleted file mode 100644 index 0ebc7100de..0000000000 --- a/var/spack/packages/gtkplus/package.py +++ /dev/null @@ -1,22 +0,0 @@ -from spack import * - -class Gtkplus(Package): - """The GTK+ 2 package contains libraries used for creating graphical user interfaces for applications.""" - homepage = "http://www.gtk.org" - - version('2.24.25', '612350704dd3aacb95355a4981930c6f', - url="http://ftp.gnome.org/pub/gnome/sources/gtk+/2.24/gtk+-2.24.25.tar.xz") - - depends_on("atk") - depends_on("gdk-pixbuf") - depends_on("pango") - - def patch(self): - # remove disable deprecated flag. - filter_file(r'CFLAGS="-DGDK_PIXBUF_DISABLE_DEPRECATED $CFLAGS"', - '', 'configure', string=True) - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/harfbuzz/package.py b/var/spack/packages/harfbuzz/package.py deleted file mode 100644 index ed7c42a909..0000000000 --- a/var/spack/packages/harfbuzz/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Harfbuzz(Package): - """The Harfbuzz package contains an OpenType text shaping engine.""" - homepage = "http://www.freedesktop.org/wiki/Software/HarfBuzz/" - url = "http://www.freedesktop.org/software/harfbuzz/release/harfbuzz-0.9.37.tar.bz2" - - version('0.9.37', 'bfe733250e34629a188d82e3b971bc1e') - - depends_on("glib") - depends_on("icu") - depends_on("freetype") - - def patch(self): - change_sed_delimiter('@', ';', 'src/Makefile.in') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/hdf5/package.py b/var/spack/packages/hdf5/package.py deleted file mode 100644 index 15e0ef9338..0000000000 --- a/var/spack/packages/hdf5/package.py +++ /dev/null @@ -1,42 +0,0 @@ -from spack import * - -class Hdf5(Package): - """HDF5 is a data model, library, and file format for storing and managing - data. It supports an unlimited variety of datatypes, and is designed for - flexible and efficient I/O and for high volume and complex data. - """ - - homepage = "http://www.hdfgroup.org/HDF5/" - url = "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.13/src/hdf5-1.8.13.tar.gz" - list_url = "http://www.hdfgroup.org/ftp/HDF5/releases" - list_depth = 3 - - version('1.8.15', '03cccb5b33dbe975fdcd8ae9dc021f24') - version('1.8.13', 'c03426e9e77d7766944654280b467289') - - depends_on("mpi") - depends_on("zlib") - - # TODO: currently hard-coded to use OpenMPI - def install(self, spec, prefix): - - configure( - "--prefix=%s" % prefix, - "--with-zlib=%s" % spec['zlib'].prefix, - "--enable-parallel", - "--enable-shared", - "CC=%s" % spec['mpich'].prefix.bin + "/mpicc", - "CXX=%s" % spec['mpich'].prefix.bin + "/mpic++") - - make() - make("install") - - def url_for_version(self, version): - v = str(version) - - if version == Version("1.2.2"): - return "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-" + v + ".tar.gz" - elif version < Version("1.7"): - return "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-" + version.up_to(2) + "/hdf5-" + v + ".tar.gz" - else: - return "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-" + v + "/src/hdf5-" + v + ".tar.gz" diff --git a/var/spack/packages/hwloc/package.py b/var/spack/packages/hwloc/package.py deleted file mode 100644 index 31a31f376a..0000000000 --- a/var/spack/packages/hwloc/package.py +++ /dev/null @@ -1,25 +0,0 @@ -from spack import * - -class Hwloc(Package): - """The Portable Hardware Locality (hwloc) software package - provides a portable abstraction (across OS, versions, - architectures, ...) of the hierarchical topology of modern - architectures, including NUMA memory nodes, sockets, shared - caches, cores and simultaneous multithreading. It also gathers - various system attributes such as cache and memory information - as well as the locality of I/O devices such as network - interfaces, InfiniBand HCAs or GPUs. It primarily aims at - helping applications with gathering information about modern - computing hardware so as to exploit it accordingly and - efficiently.""" - homepage = "http://www.open-mpi.org/projects/hwloc/" - url = "http://www.open-mpi.org/software/hwloc/v1.9/downloads/hwloc-1.9.tar.gz" - - version('1.9', '1f9f9155682fe8946a97c08896109508') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") - diff --git a/var/spack/packages/hypre/package.py b/var/spack/packages/hypre/package.py deleted file mode 100644 index 198b3f00dc..0000000000 --- a/var/spack/packages/hypre/package.py +++ /dev/null @@ -1,32 +0,0 @@ -from spack import * - -class Hypre(Package): - """Hypre is a library of high performance preconditioners that - features parallel multigrid methods for both structured and - unstructured grid problems.""" - - homepage = "https://computation.llnl.gov/project/linear_solvers/software.php" - url = "https://computation.llnl.gov/project/linear_solvers/download/hypre-2.10.0b.tar.gz" - - version('2.10.0b', '768be38793a35bb5d055905b271f5b8e') - - depends_on("mpi") - depends_on("blas") - depends_on("lapack") - - def install(self, spec, prefix): - blas_dir = spec['blas'].prefix - lapack_dir = spec['lapack'].prefix - - # Hypre's source is staged under ./src so we'll have to manually - # cd into it. - with working_dir("src"): - configure( - "--prefix=%s" % prefix, - "--with-blas-libs=blas", - "--with-blas-lib-dirs=%s/lib" % blas_dir, - "--with-lapack-libs=\"lapack blas\"", - "--with-lapack-lib-dirs=%s/lib" % lapack_dir, - "--with-MPI") - make() - make("install") diff --git a/var/spack/packages/icu/package.py b/var/spack/packages/icu/package.py deleted file mode 100644 index f256ec5712..0000000000 --- a/var/spack/packages/icu/package.py +++ /dev/null @@ -1,25 +0,0 @@ -from spack import * - -class Icu(Package): - """The International Components for Unicode (ICU) package is a - mature, widely used set of C/C++ libraries providing Unicode and - Globalization support for software applications. ICU is widely - portable and gives applications the same results on all - platforms.""" - # FIXME: add a proper url for your package's homepage here. - homepage = "http://www.example.com" - url = "http://download.icu-project.org/files/icu4c/54.1/icu4c-54_1-src.tgz" - - version('54.1', 'e844caed8f2ca24c088505b0d6271bc0') - - - def url_for_version(self, version): - return "http://download.icu-project.org/files/icu4c/%s/icu4c-%s-src.tgz" % ( - version, str(version).replace('.', '_')) - - - def install(self, spec, prefix): - with working_dir("source"): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/icu4c/package.py b/var/spack/packages/icu4c/package.py deleted file mode 100644 index 55b44463b2..0000000000 --- a/var/spack/packages/icu4c/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Icu4c(Package): - """ICU is a mature, widely used set of C/C++ and Java libraries - providing Unicode and Globalization support for software applications.""" - - homepage = "http://site.icu-project.org/" - url = "http://downloads.sourceforge.net/project/icu/ICU4C/54.1/icu4c-54_1-src.tgz" - - version('54_1', 'e844caed8f2ca24c088505b0d6271bc0') - - def install(self, spec, prefix): - cd("source") - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/isl/package.py b/var/spack/packages/isl/package.py deleted file mode 100644 index 836ef3ea40..0000000000 --- a/var/spack/packages/isl/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Isl(Package): - """isl is a thread-safe C library for manipulating sets and - relations of integer points bounded by affine constraints.""" - homepage = "http://isl.gforge.inria.fr" - url = "http://isl.gforge.inria.fr/isl-0.14.tar.bz2" - - version('0.14', 'acd347243fca5609e3df37dba47fd0bb') - - depends_on("gmp") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--with-gmp-prefix=%s" % spec['gmp'].prefix) - make() - make("install") diff --git a/var/spack/packages/jdk/package.py b/var/spack/packages/jdk/package.py deleted file mode 100644 index 8f8076dd14..0000000000 --- a/var/spack/packages/jdk/package.py +++ /dev/null @@ -1,46 +0,0 @@ -#------------------------------------------------------------------------------ -# Author: Justin Too <too1@llnl.gov> -#------------------------------------------------------------------------------ -import distutils -from distutils import dir_util -from subprocess import call - -import spack -from spack import * -import llnl.util.tty as tty - -class Jdk(Package): - """The Java Development Kit (JDK) released by Oracle Corporation - in the form of a binary product aimed at Java developers.""" - homepage = "http://www.oracle.com/technetwork/java/javase/downloads/index.html" - - version('8u25-linux-x64', 'e145c03a7edc845215092786bcfba77e', - url="http://download.oracle.com/otn-pub/java/jdk/8u25-b17/jdk-8u25-linux-x64.tar.gz") - - # Oracle requires that you accept their License Agreement in order - # to access the Java packages in download.oracle.com. In order to - # automate this process, we need to utilize these additional curl - # commandline options. - # - # See http://stackoverflow.com/questions/10268583/how-to-automate-download-and-installation-of-java-jdk-on-linux - curl_options=[ - '-j', # junk cookies - '-H', # specify required License Agreement cookie - 'Cookie: oraclelicense=accept-securebackup-cookie'] - - def do_fetch(self): - # Add our custom curl commandline options - tty.msg( - "[Jdk] Adding required commandline options to curl " + - "before performing fetch: %s" % - (self.curl_options)) - - for option in self.curl_options: - spack.curl.add_default_arg(option) - - # Now perform the actual fetch - super(Jdk, self).do_fetch() - - - def install(self, spec, prefix): - distutils.dir_util.copy_tree(".", prefix) diff --git a/var/spack/packages/jpeg/package.py b/var/spack/packages/jpeg/package.py deleted file mode 100644 index 87820467db..0000000000 --- a/var/spack/packages/jpeg/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class Jpeg(Package): - """jpeg library""" - homepage = "http://www.ijg.org" - url = "http://www.ijg.org/files/jpegsrc.v9a.tar.gz" - - version('9a', '3353992aecaee1805ef4109aadd433e7') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/launchmon/package.py b/var/spack/packages/launchmon/package.py deleted file mode 100644 index 6fbe6a68d0..0000000000 --- a/var/spack/packages/launchmon/package.py +++ /dev/null @@ -1,47 +0,0 @@ -############################################################################## -# Copyright (c) 2014, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Matthew LeGendre, legendre1@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Launchmon(Package): - """Software infrastructure that enables HPC run-time tools to - co-locate tool daemons with a parallel job.""" - homepage = "http://sourceforge.net/projects/launchmon" - url = "http://downloads.sourceforge.net/project/launchmon/launchmon/1.0.1%20release/launchmon-1.0.1.tar.gz" - - version('1.0.1', '2f12465803409fd07f91174a4389eb2b') - version('1.0.1-2', git='https://github.com/scalability-llnl/launchmon.git', commit='ff7e22424b8f375318951eb1c9282fcbbfa8aadf') - - depends_on('autoconf') - depends_on('automake') - depends_on('libtool') - - def install(self, spec, prefix): - configure( - "--prefix=" + prefix, - "--with-bootfabric=cobo", - "--with-rm=slurm") - - make() - make("install") diff --git a/var/spack/packages/launchmon/patch.lmon_install_dir b/var/spack/packages/launchmon/patch.lmon_install_dir deleted file mode 100644 index 8a1d93fdc9..0000000000 --- a/var/spack/packages/launchmon/patch.lmon_install_dir +++ /dev/null @@ -1,147 +0,0 @@ -Index: launchmon/src/linux/lmon_api/Makefile.am -=================================================================== ---- launchmon/src/linux/lmon_api/Makefile.am (revision 481) -+++ launchmon/src/linux/lmon_api/Makefile.am (working copy) -@@ -80,13 +80,10 @@ - libmonfeapi_la_CFLAGS = $(AM_CFLAGS) - libmonfeapi_la_CXXFLAGS = $(AM_CXXFLAGS) - --libmonfeapi_la_LDFLAGS = -L$(top_srcdir)/@COMMLOC@ \ -- -L$(top_srcdir)/@GCRYPTLOC@ \ -- -L$(top_srcdir)/@GPGERRLOC@ \ -- $(AM_LDFLAGS) \ -- -version-info @LMON_CURRENT@:@LMON_REVISION@:@LMON_AGE@ -+libmonfeapi_la_LDFLAGS = $(AM_LDFLAGS) \ -+ -version-info @LMON_CURRENT@:@LMON_REVISION@:@LMON_AGE@ - --libmonfeapi_la_LIBADD = @LIBPTHREAD@ @LIBCOMM@ @LIBGCRYPT@ @LIBGPGERR@ @LIBRT@ -+libmonfeapi_la_LIBADD = @LIBPTHREAD@ $(top_builddir)/@COMMLOC@/@LIBCOMM@ $(top_builddir)/@GCRYPTLOC@/@LIBGCRYPT@ $(top_builddir)/@GPGERRLOC@/@LIBGPGERR@ @LIBRT@ - - libmonbeapi_la_SOURCES = lmon_be.cxx \ - lmon_daemon_internal.cxx \ -@@ -113,13 +110,10 @@ - libmonbeapi_la_CFLAGS = $(AM_CFLAGS) - libmonbeapi_la_CXXFLAGS = $(AM_CXXFLAGS) - --libmonbeapi_la_LDFLAGS = -L$(top_srcdir)/@COMMLOC@ \ -- -L$(top_srcdir)/@GCRYPTLOC@ \ -- -L$(top_srcdir)/@GPGERRLOC@ \ -- $(AM_LDFLAGS) \ -+libmonbeapi_la_LDFLAGS = $(AM_LDFLAGS) \ - -version-info @LMON_CURRENT@:@LMON_REVISION@:@LMON_AGE@ - --libmonbeapi_la_LIBADD = @LIBCOMM@ @LIBGCRYPT@ @LIBGPGERR@ -+libmonbeapi_la_LIBADD = $(top_builddir)/@COMMLOC@/@LIBCOMM@ $(top_builddir)/@GCRYPTLOC@/@LIBGCRYPT@ $(top_builddir)/@GPGERRLOC@/@LIBGPGERR@ - - - # -@@ -146,10 +140,8 @@ - - libmonmwapi_la_CXXFLAGS = $(AM_CXXFLAGS) - --libmonmwapi_la_LDFLAGS = -L$(top_srcdir)/@COMMLOC@ \ -- -L$(top_srcdir)/@GCRYPTLOC@ \ -- -L$(top_srcdir)/@GPGERRLOC@ \ -- $(AM_LDFLAGS) \ -+libmonmwapi_la_LDFLAGS = $(AM_LDFLAGS) \ - -version-info @LMON_CURRENT@:@LMON_REVISION@:@LMON_AGE@ - --libmonmwapi_la_LIBADD = @LIBCOMM@ @LIBGCRYPT@ @LIBGPGERR@ -+ -+libmonmwapi_la_LIBADD = $(top_builddir)/@COMMLOC@/@LIBCOMM@ $(top_builddir)/@GCRYPTLOC@/@LIBGCRYPT@ $(top_builddir)/@GPGERRLOC@/@LIBGPGERR@ -Index: tools/cobo/test/Makefile.am -=================================================================== ---- tools/cobo/test/Makefile.am (revision 481) -+++ tools/cobo/test/Makefile.am (working copy) -@@ -37,12 +37,12 @@ - - client_SOURCES = client.c - --client_LDFLAGS = -L$(top_srcdir)/@COMMLOC@ -+client_LDFLAGS = - --client_LDADD = @LIBCOMM@ -+client_LDADD = $(top_srcdir)/@COMMLOC@/@LIBCOMM@ - - server_rsh_SOURCES = server_rsh.c - --server_rsh_LDFLAGS = -L$(top_srcdir)/@COMMLOC@ -+server_rsh_LDFLAGS = - --server_rsh_LDADD = @LIBCOMM@ -+server_rsh_LDADD = $(top_srcdir)/@COMMLOC@/@LIBCOMM@ -Index: tools/pmgr_collective/test/Makefile.am -=================================================================== ---- tools/pmgr_collective/test/Makefile.am (revision 481) -+++ tools/pmgr_collective/test/Makefile.am (working copy) -@@ -31,18 +31,18 @@ - ## Jun 10 2008 DHA: Copied from the old Makefile. - ## - --INCLUDES = -I$(top_srcdir)/@COMMLOC@ -+INCLUDES = - - noinst_PROGRAMS = client mpirun_rsh - - client_SOURCES = client.c - --client_LDFLAGS = -L$(top_srcdir)/@COMMLOC@ -+client_LDFLAGS = - --client_LDADD = @LIBCOMM@ -+client_LDADD = @COMMLOC@/@LIBCOMM@ - - mpirun_rsh_SOURCES = mpirun_rsh.c - --mpirun_rsh_LDFLAGS = -L$(top_srcdir)/@COMMLOC@ -+mpirun_rsh_LDFLAGS = - --mpirun_rsh_LDADD = @LIBCOMM@ -+mpirun_rsh_LDADD = @COMMLOC@/@LIBCOMM@ -Index: config/x_ac_bootfabric.m4 -=================================================================== ---- config/x_ac_bootfabric.m4 (revision 481) -+++ config/x_ac_bootfabric.m4 (working copy) -@@ -63,7 +63,7 @@ - #AC_DEFINE(TOOL_SS_ENV, "LMON_SHARED_SECRET", [Define TOOL_SS_ENV]) - #AC_DEFINE(TOOL_SCH_ENV, "LMON_SEC_CHK", [Define TOOL_SCH_ENV]) - #AC_SUBST(COMMLOC, tools/pmgr_collective/src) -- #AC_SUBST(LIBCOMM, -lpmgr_collective) -+ #AC_SUBST(LIBCOMM, libcobo.la) - #else - commfab_found="no" - AC_MSG_ERROR([--with-bootfabric=pmgr is given, but pmgr_collective has been deprecated]) -@@ -87,7 +87,7 @@ - AC_DEFINE(TOOL_SS_ENV, "LMON_SHARED_SECRET", [Define TOOL_SS_ENV]) - AC_DEFINE(TOOL_SCH_ENV, "LMON_SEC_CHK", [Define TOOL_SCH_ENV]) - AC_SUBST(COMMLOC, tools/cobo/src) -- AC_SUBST(LIBCOMM, -lcobo) -+ AC_SUBST(LIBCOMM, libcobo.la) - - if test "x$with_cobo_port" != "xcheck" -a "x$with_cobo_port" != "xyes"; then - AC_DEFINE(COBO_BEGIN_PORT, $with_cobo_port, [Define a beginning port for COBO_BASED]) -@@ -117,7 +117,7 @@ - AC_DEFINE(TOOL_SS_ENV, "LMON_SHARED_SECRET", [Define TOOL_SS_ENV]) - AC_DEFINE(TOOL_SCH_ENV, "LMON_SEC_CHK", [Define TOOL_SCH_ENV]) - AC_SUBST(COMMLOC, tools/cobo/src) -- AC_SUBST(LIBCOMM, -lcobo) -+ AC_SUBST(LIBCOMM, libcobo.la) - - if test "x$with_cobo_port" != "xcheck" -a "x$with_cobo_port" != "xyes"; then - AC_DEFINE(COBO_BEGIN_PORT, $with_cobo_port, [Define a beginning port for COBO_BASED]) -Index: config/x_ac_gcrpyt.m4 -=================================================================== ---- config/x_ac_gcrypt.m4 2011-10-22 00:50:38.000000000 -0700 -+++ config/x_ac_gcrypt.patched.m4 2014-03-14 11:33:59.189220000 -0700 -@@ -55,8 +55,8 @@ - AC_CONFIG_SUBDIRS([tools/libgpg-error]) - AC_SUBST(GPGERRLOC, [tools/libgpg-error/src]) - AC_SUBST(GCRYPTLOC, [tools/libgcrypt/src]) -- AC_SUBST(LIBGCRYPT, [-lgcrypt]) -- AC_SUBST(LIBGPGERR, [-lgpg-error]) -+ AC_SUBST(LIBGCRYPT, [libgcrypt.la]) -+ AC_SUBST(LIBGPGERR, [libgpg-error.la]) - gcrypt_configured="yes" - else - AC_MSG_ERROR([tools/libgpg-error or tools/libgcrypt not found]) - diff --git a/var/spack/packages/lcms/package.py b/var/spack/packages/lcms/package.py deleted file mode 100644 index a53c2f997a..0000000000 --- a/var/spack/packages/lcms/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Lcms(Package): - """Little cms is a color management library. Implements fast - transforms between ICC profiles. It is focused on speed, and is - portable across several platforms (MIT license).""" - homepage = "http://www.littlecms.com" - url = "http://downloads.sourceforge.net/project/lcms/lcms/2.6/lcms2-2.6.tar.gz" - - version('2.6', 'f4c08d38ceade4a664ebff7228910a33') - - depends_on("jpeg") - depends_on("libtiff") - depends_on("zlib") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/leveldb/package.py b/var/spack/packages/leveldb/package.py deleted file mode 100644 index da68a9cbcb..0000000000 --- a/var/spack/packages/leveldb/package.py +++ /dev/null @@ -1,29 +0,0 @@ -import os -import glob -from spack import * - -class Leveldb(Package): - """LevelDB is a fast key-value storage library written at Google - that provides an ordered mapping from string keys to string values.""" - - homepage = "https://github.com/google/leveldb" - url = "https://github.com/google/leveldb/archive/v1.18.tar.gz" - - version('1.18', '73770de34a2a5ab34498d2e05b2b7fa0') - - depends_on("snappy") - - def install(self, spec, prefix): - make() - - mkdirp(prefix.include) - mkdirp(prefix.lib) - - cp = which('cp') - - # cp --preserve=links libleveldb.* prefix/lib - args = glob.glob('libleveldb.*') - args.append(prefix + '/lib') - cp('--preserve=links', *args) - - cp('-r', 'include/leveldb', prefix + '/include') diff --git a/var/spack/packages/libNBC/package.py b/var/spack/packages/libNBC/package.py deleted file mode 100644 index 6d08f3219c..0000000000 --- a/var/spack/packages/libNBC/package.py +++ /dev/null @@ -1,43 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Libnbc(Package): - """LibNBC is a prototypic implementation of a nonblocking - interface for MPI collective operations. Based on ANSI C and - MPI-1, it supports all MPI-1 collective operations in a - nonblocking manner. LibNBC is distributed under the BSD license. - """ - homepage = "http://unixer.de/research/nbcoll/libnbc/" - url = "http://unixer.de/research/nbcoll/libnbc/libNBC-1.1.1.tar.gz" - - version('1.1.1', 'ece5c94992591a9fa934a90e5dbe50ce') - - depends_on("mpi") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/libarchive/package.py b/var/spack/packages/libarchive/package.py deleted file mode 100644 index cbd4b89cd0..0000000000 --- a/var/spack/packages/libarchive/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Libarchive(Package): - """libarchive: C library and command-line tools for reading and - writing tar, cpio, zip, ISO, and other archive formats.""" - homepage = "http://www.libarchive.org" - url = "http://www.libarchive.org/downloads/libarchive-3.1.2.tar.gz" - - version('3.1.2', 'efad5a503f66329bb9d2f4308b5de98a') - version('3.1.1', '1f3d883daf7161a0065e42a15bbf168f') - version('3.1.0', '095a287bb1fd687ab50c85955692bf3a') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/libcircle/package.py b/var/spack/packages/libcircle/package.py deleted file mode 100644 index 3f7c996fb0..0000000000 --- a/var/spack/packages/libcircle/package.py +++ /dev/null @@ -1,18 +0,0 @@ -import os -from spack import * - -class Libcircle(Package): - """libcircle provides an efficient distributed queue on a cluster, - using self-stabilizing work stealing.""" - - homepage = "https://github.com/hpc/libcircle" - - version('0.2.1-rc.1', '2b1369a5736457239f908abf88143ec2', - url='https://github.com/hpc/libcircle/releases/download/0.2.1-rc.1/libcircle-0.2.1-rc.1.tar.gz') - - depends_on('mpi') - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/libdrm/package.py b/var/spack/packages/libdrm/package.py deleted file mode 100644 index 00736b7811..0000000000 --- a/var/spack/packages/libdrm/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Libdrm(Package): - """A userspace library for accessing the DRM, direct - rendering manager, on Linux, BSD and other operating - systems that support the ioctl interface.""" - - homepage = "http://dri.freedesktop.org/libdrm/" # no real website... - url = "http://dri.freedesktop.org/libdrm/libdrm-2.4.59.tar.gz" - - version('2.4.59', '105ac7af1afcd742d402ca7b4eb168b6') - version('2.4.33', '86e4e3debe7087d5404461e0032231c8') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libdwarf/package.py b/var/spack/packages/libdwarf/package.py deleted file mode 100644 index 099a974e93..0000000000 --- a/var/spack/packages/libdwarf/package.py +++ /dev/null @@ -1,81 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * -import os - -# Only build certain parts of dwarf because the other ones break. -dwarf_dirs = ['libdwarf', 'dwarfdump2'] - -class Libdwarf(Package): - """The DWARF Debugging Information Format is of interest to - programmers working on compilers and debuggers (and any one - interested in reading or writing DWARF information). It was - developed by a committee (known as the PLSIG at the time) - starting around 1991. Starting around 1991 SGI developed the - libdwarf and dwarfdump tools for internal use and as part of - SGI IRIX developer tools. Since that time dwarfdump and - libdwarf have been shipped (as an executable and archive - respectively, not source) with every release of the SGI - MIPS/IRIX C compiler.""" - - homepage = "http://www.prevanders.net/dwarf.html" - url = "http://www.prevanders.net/libdwarf-20130729.tar.gz" - list_url = homepage - - version('20130729', '4cc5e48693f7b93b7aa0261e63c0e21d') - version('20130207', '64b42692e947d5180e162e46c689dfbf') - version('20130126', 'ded74a5e90edb5a12aac3c29d260c5db') - - depends_on("libelf") - - parallel = False - - - def install(self, spec, prefix): - # dwarf build does not set arguments for ar properly - make.add_default_arg('ARFLAGS=rcs') - - # Dwarf doesn't provide an install, so we have to do it. - mkdirp(prefix.bin, prefix.include, prefix.lib, prefix.man1) - - with working_dir('libdwarf'): - configure("--prefix=" + prefix, "--enable-shared") - make() - - install('libdwarf.a', prefix.lib) - install('libdwarf.so', prefix.lib) - install('libdwarf.h', prefix.include) - install('dwarf.h', prefix.include) - - with working_dir('dwarfdump2'): - configure("--prefix=" + prefix) - - # This makefile has strings of copy commands that - # cause a race in parallel - make(parallel=False) - - install('dwarfdump', prefix.bin) - install('dwarfdump.conf', prefix.lib) - install('dwarfdump.1', prefix.man1) diff --git a/var/spack/packages/libelf/package.py b/var/spack/packages/libelf/package.py deleted file mode 100644 index 9338b8f393..0000000000 --- a/var/spack/packages/libelf/package.py +++ /dev/null @@ -1,49 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Libelf(Package): - """libelf lets you read, modify or create ELF object files in an - architecture-independent way. The library takes care of size - and endian issues, e.g. you can process a file for SPARC - processors on an Intel-based system.""" - - homepage = "http://www.mr511.de/software/english.html" - url = "http://www.mr511.de/software/libelf-0.8.13.tar.gz" - - version('0.8.13', '4136d7b4c04df68b686570afa26988ac') - version('0.8.12', 'e21f8273d9f5f6d43a59878dc274fec7') - - provides('elf') - - def install(self, spec, prefix): - configure("--prefix=" + prefix, - "--enable-shared", - "--disable-dependency-tracking", - "--disable-debug") - make() - - # The mkdir commands in libelf's install can fail in parallel - make("install", parallel=False) diff --git a/var/spack/packages/libevent/package.py b/var/spack/packages/libevent/package.py deleted file mode 100644 index 11b1083d67..0000000000 --- a/var/spack/packages/libevent/package.py +++ /dev/null @@ -1,30 +0,0 @@ -from spack import * - -class Libevent(Package): - """The libevent API provides a mechanism to execute a callback function - when a specific event occurs on a file descriptor or after a timeout has been - reached. Furthermore, libevent also support callbacks due to signals or regular - timeouts. - """ - - homepage = "http://libevent.org" - url = "https://github.com/downloads/libevent/libevent/libevent-2.0.21-stable.tar.gz" - list_url = "http://libevent.org/old-releases.html" - - version('2.0.21', 'b2405cc9ebf264aa47ff615d9de527a2') - version('2.0.20', '94270cdee32c0cd0aa9f4ee6ede27e8e') - version('2.0.19', '91111579769f46055b0a438f5cc59572') - version('2.0.18', 'aa1ce9bc0dee7b8084f6855765f2c86a') - version('2.0.17', 'dad64aaaaff16b5fbec25160c06fee9a') - version('2.0.16', '899efcffccdb3d5111419df76e7dc8df') - version('2.0.15', '2643abe7ba242df15c08b2cc14ec8759') - version('2.0.14', 'cac0f379da35d3b98f83ac16fcfe1df4') - version('2.0.13', 'af786b4b3f790c9d3279792edf7867fc') - version('2.0.12', '42986228baf95e325778ed328a93e070') - - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libffi/package.py b/var/spack/packages/libffi/package.py deleted file mode 100644 index acec031717..0000000000 --- a/var/spack/packages/libffi/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Libffi(Package): - """The libffi library provides a portable, high level programming - interface to various calling conventions. This allows a programmer - to call any function specified by a call interface description at - run time.""" - homepage = "https://sourceware.org/libffi/" - - version('3.2.1','83b89587607e3eb65c70d361f13bab43',url = "ftp://sourceware.org/pub/libffi/libffi-3.2.1.tar.gz") - #version('3.1', 'f5898b29bbfd70502831a212d9249d10',url = "ftp://sourceware.org/pub/libffi/libffi-3.1.tar.gz") # Has a bug $(lib64) instead of ${lib64} in libffi.pc - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") - diff --git a/var/spack/packages/libgcrypt/package.py b/var/spack/packages/libgcrypt/package.py deleted file mode 100644 index 1d0a57f317..0000000000 --- a/var/spack/packages/libgcrypt/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Libgcrypt(Package): - """Libgcrypt is a general purpose cryptographic library based on - the code from GnuPG. It provides functions for all cryptographic - building blocks: symmetric ciphers, hash algorithms, MACs, public - key algorithms, large integer functions, random numbers and a lot - of supporting functions. """ - homepage = "http://www.gnu.org/software/libgcrypt/" - url = "ftp://ftp.gnupg.org/gcrypt/libgcrypt/libgcrypt-1.6.2.tar.bz2" - - version('1.6.2', 'b54395a93cb1e57619943c082da09d5f') - - depends_on("libgpg-error") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/libgpg-error/package.py b/var/spack/packages/libgpg-error/package.py deleted file mode 100644 index 6c1d1a10a7..0000000000 --- a/var/spack/packages/libgpg-error/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class LibgpgError(Package): - """Libgpg-error is a small library that defines common error - values for all GnuPG components. Among these are GPG, GPGSM, - GPGME, GPG-Agent, libgcrypt, Libksba, DirMngr, Pinentry, - SmartCard Daemon and possibly more in the future. """ - - homepage = "https://www.gnupg.org/related_software/libgpg-error" - url = "ftp://ftp.gnupg.org/gcrypt/libgpg-error/libgpg-error-1.18.tar.bz2" - - version('1.18', '12312802d2065774b787cbfc22cc04e9') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/libjpeg-turbo/package.py b/var/spack/packages/libjpeg-turbo/package.py deleted file mode 100644 index 07ee183947..0000000000 --- a/var/spack/packages/libjpeg-turbo/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class LibjpegTurbo(Package): - """libjpeg-turbo is a fork of the original IJG libjpeg which uses - SIMD to accelerate baseline JPEG compression and - decompression. libjpeg is a library that implements JPEG image - encoding, decoding and transcoding.""" - homepage = "http://libjpeg-turbo.virtualgl.org" - url = "http://downloads.sourceforge.net/libjpeg-turbo/libjpeg-turbo-1.3.1.tar.gz" - - version('1.3.1', '2c3a68129dac443a72815ff5bb374b05') - - # Can use either of these. - depends_on("yasm") - depends_on("nasm") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/libjson-c/package.py b/var/spack/packages/libjson-c/package.py deleted file mode 100644 index c0801cce9c..0000000000 --- a/var/spack/packages/libjson-c/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class LibjsonC(Package): - """ A JSON implementation in C """ - homepage = "https://github.com/json-c/json-c/wiki" - url = "https://s3.amazonaws.com/json-c_releases/releases/json-c-0.11.tar.gz" - - version('0.11', 'aa02367d2f7a830bf1e3376f77881e98') - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix) - - make() - make("install") diff --git a/var/spack/packages/libmng/package.py b/var/spack/packages/libmng/package.py deleted file mode 100644 index e5336ea2c2..0000000000 --- a/var/spack/packages/libmng/package.py +++ /dev/null @@ -1,23 +0,0 @@ -from spack import * - -class Libmng(Package): - """libmng -THE reference library for reading, displaying, writing - and examining Multiple-Image Network Graphics. MNG is the animation - extension to the popular PNG image-format.""" - homepage = "http://sourceforge.net/projects/libmng/" - url = "http://downloads.sourceforge.net/project/libmng/libmng-devel/2.0.2/libmng-2.0.2.tar.gz" - - version('2.0.2', '1ffefaed4aac98475ee6267422cbca55') - - depends_on("jpeg") - depends_on("zlib") - depends_on("lcms") - - def patch(self): - # jpeg requires stdio to beincluded before its headrs. - filter_file(r'^(\#include \<jpeglib\.h\>)', '#include<stdio.h>\n\\1', 'libmng_types.h') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/libmonitor/package.py b/var/spack/packages/libmonitor/package.py deleted file mode 100644 index 3b95b86ddf..0000000000 --- a/var/spack/packages/libmonitor/package.py +++ /dev/null @@ -1,36 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Libmonitor(Package): - """Libmonitor is a library for process and thread control.""" - homepage = "http://hpctoolkit.org" - - version('20130218', svn='http://libmonitor.googlecode.com/svn/trunk/', revision=146) - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/libpciaccess/package.py b/var/spack/packages/libpciaccess/package.py deleted file mode 100644 index 6022fc34a3..0000000000 --- a/var/spack/packages/libpciaccess/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * - -class Libpciaccess(Package): - """Generic PCI access library.""" - - homepage = "http://cgit.freedesktop.org/xorg/lib/libpciaccess/" - url = "http://cgit.freedesktop.org/xorg/lib/libpciaccess/" - - version('0.13.4', git='http://anongit.freedesktop.org/git/xorg/lib/libpciaccess.git', - tag='libpciaccess-0.13.4') - - depends_on('autoconf') - depends_on('libtool') - - def install(self, spec, prefix): - from subprocess import call - call(["./autogen.sh"]) - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libpng/package.py b/var/spack/packages/libpng/package.py deleted file mode 100644 index e02b08663e..0000000000 --- a/var/spack/packages/libpng/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class Libpng(Package): - """libpng graphics file format""" - homepage = "http://www.libpng.org/pub/png/libpng.html" - url = "http://download.sourceforge.net/libpng/libpng-1.6.16.tar.gz" - - version('1.6.16', '1a4ad377919ab15b54f6cb6a3ae2622d') - version('1.6.15', '829a256f3de9307731d4f52dc071916d') - version('1.6.14', '2101b3de1d5f348925990f9aa8405660') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/libsodium/package.py b/var/spack/packages/libsodium/package.py deleted file mode 100644 index 1c8a16d998..0000000000 --- a/var/spack/packages/libsodium/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Libsodium(Package): - """Sodium is a modern, easy-to-use software library for encryption, - decryption, signatures, password hashing and more.""" - homepage = "https://download.libsodium.org/doc/" - url = "https://download.libsodium.org/libsodium/releases/libsodium-1.0.3.tar.gz" - - version('1.0.3', 'b3bcc98e34d3250f55ae196822307fab') - version('1.0.2', 'dc40eb23e293448c6fc908757738003f') - version('1.0.1', '9a221b49fba7281ceaaf5e278d0f4430') - version('1.0.0', '3093dabe4e038d09f0d150cef064b2f7') - version('0.7.1', 'c224fe3923d1dcfe418c65c8a7246316') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libtiff/package.py b/var/spack/packages/libtiff/package.py deleted file mode 100644 index 63c6704cb8..0000000000 --- a/var/spack/packages/libtiff/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Libtiff(Package): - """libtiff graphics format library""" - homepage = "http://www.remotesensing.org/libtiff/" - url = "http://download.osgeo.org/libtiff/tiff-4.0.3.tar.gz" - - version('4.0.3', '051c1068e6a0627f461948c365290410') - - depends_on('jpeg') - depends_on('zlib') - depends_on('xz') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libtool/package.py b/var/spack/packages/libtool/package.py deleted file mode 100644 index a07daf9781..0000000000 --- a/var/spack/packages/libtool/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class Libtool(Package): - """libtool -- library building part of autotools""" - homepage = "https://www.gnu.org/software/libtool/" - url = "http://ftpmirror.gnu.org/libtool/libtool-2.4.2.tar.gz" - - version('2.4.2' , 'd2f3b7d4627e69e13514a40e72a24d50') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libunwind/package.py b/var/spack/packages/libunwind/package.py deleted file mode 100644 index 239fcbcfd5..0000000000 --- a/var/spack/packages/libunwind/package.py +++ /dev/null @@ -1,38 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Libunwind(Package): - """A portable and efficient C programming interface (API) to determine - the call-chain of a program.""" - homepage = "http://www.nongnu.org/libunwind/" - url = "http://download.savannah.gnu.org/releases/libunwind/libunwind-1.1.tar.gz" - - version('1.1', 'fb4ea2f6fbbe45bf032cd36e586883ce') - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/libuuid/package.py b/var/spack/packages/libuuid/package.py deleted file mode 100644 index 373c5bfcac..0000000000 --- a/var/spack/packages/libuuid/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Libuuid(Package): - """Portable uuid C library""" - # FIXME: add a proper url for your package's homepage here. - homepage = "http://sourceforge.net/projects/libuuid/" - url = "http://downloads.sourceforge.net/project/libuuid/libuuid-1.0.3.tar.gz?r=http%3A%2F%2Fsourceforge.net%2Fprojects%2Flibuuid%2F&ts=1433881396&use_mirror=iweb" - - version('1.0.3', 'd44d866d06286c08ba0846aba1086d68') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - # FIXME: Add logic to build and install here - make() - make("install") diff --git a/var/spack/packages/libxcb/package.py b/var/spack/packages/libxcb/package.py deleted file mode 100644 index 16a5525c0d..0000000000 --- a/var/spack/packages/libxcb/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * - -class Libxcb(Package): - """The X protocol C-language Binding (XCB) is a replacement - for Xlib featuring a small footprint, latency hiding, direct - access to the protocol, improved threading support, and - extensibility.""" - - homepage = "http://xcb.freedesktop.org/" - url = "http://xcb.freedesktop.org/dist/libxcb-1.11.tar.gz" - - version('1.11', '1698dd837d7e6e94d029dbe8b3a82deb') - version('1.11.1', '118623c15a96b08622603a71d8789bf3') - depends_on("python") - depends_on("xcb-proto") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libxml2/package.py b/var/spack/packages/libxml2/package.py deleted file mode 100644 index 3a0af6b368..0000000000 --- a/var/spack/packages/libxml2/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Libxml2(Package): - """Libxml2 is the XML C parser and toolkit developed for the Gnome - project (but usable outside of the Gnome platform), it is free - software available under the MIT License.""" - homepage = "http://xmlsoft.org" - url = "http://xmlsoft.org/sources/libxml2-2.9.2.tar.gz" - - version('2.9.2', '9e6a9aca9d155737868b3dc5fd82f788') - - extends('python') - depends_on('zlib') - depends_on('xz') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libxshmfence/package.py b/var/spack/packages/libxshmfence/package.py deleted file mode 100644 index 3aa2448b46..0000000000 --- a/var/spack/packages/libxshmfence/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Libxshmfence(Package): - """This is a tiny library that exposes a event API on top of Linux - futexes.""" - - homepage = "http://keithp.com/blogs/dri3_extension/" # not really... - url = "http://xorg.freedesktop.org/archive/individual/lib/libxshmfence-1.2.tar.gz" - - version('1.2', 'f0b30c0fc568b22ec524859ee28556f1') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/libxslt/package.py b/var/spack/packages/libxslt/package.py deleted file mode 100644 index f97332d020..0000000000 --- a/var/spack/packages/libxslt/package.py +++ /dev/null @@ -1,24 +0,0 @@ -from spack import * - -class Libxslt(Package): - """Libxslt is the XSLT C library developed for the GNOME - project. XSLT itself is a an XML language to define - transformation for XML. Libxslt is based on libxml2 the XML C - library developed for the GNOME project. It also implements - most of the EXSLT set of processor-portable extensions - functions and some of Saxon's evaluate and expressions - extensions.""" - homepage = "http://www.xmlsoft.org/XSLT/index.html" - url = "http://xmlsoft.org/sources/libxslt-1.1.28.tar.gz" - - version('1.1.28', '9667bf6f9310b957254fdcf6596600b7') - - depends_on("libxml2") - depends_on("xz") - depends_on("zlib") - depends_on("libgcrypt") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/llvm-lld/package.py b/var/spack/packages/llvm-lld/package.py deleted file mode 100644 index f229211396..0000000000 --- a/var/spack/packages/llvm-lld/package.py +++ /dev/null @@ -1,46 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class LlvmLld(Package): - """lld - The LLVM Linker - lld is a new set of modular code for creating linker tools.""" - homepage = "http://lld.llvm.org" - url = "http://llvm.org/releases/3.4/lld-3.4.src.tar.gz" - - depends_on('llvm') - - version('3.4', '3b6a17e58c8416c869c14dd37682f78e') - - def install(self, spec, prefix): - env['CXXFLAGS'] = self.compier.cxx11_flag - - with working_dir('spack-build', create=True): - cmake('..', - '-DLLD_PATH_TO_LLVM_BUILD=%s' % spec['llvm'].prefix, - '-DLLVM_MAIN_SRC_DIR=%s' % spec['llvm'].prefix, - *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/llvm/package.py b/var/spack/packages/llvm/package.py deleted file mode 100644 index a6759c3033..0000000000 --- a/var/spack/packages/llvm/package.py +++ /dev/null @@ -1,53 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by David Beckingsale, david@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - - -class Llvm(Package): - """The LLVM Project is a collection of modular and reusable compiler and - toolchain technologies. Despite its name, LLVM has little to do with - traditional virtual machines, though it does provide helpful libraries - that can be used to build them. The name "LLVM" itself is not an acronym; - it is the full name of the project. - """ - homepage = 'http://llvm.org/' - url = 'http://llvm.org/releases/3.7.0/llvm-3.7.0.src.tar.xz' - - version('3.7.0', 'b98b9495e5655a672d6cb83e1a180f8e', url='http://llvm.org/releases/3.7.0/llvm-3.7.0.src.tar.xz') - version('3.6.2', '0c1ee3597d75280dee603bae9cbf5cc2', url='http://llvm.org/releases/3.6.2/llvm-3.6.2.src.tar.xz') - version('3.5.1', '2d3d8004f38852aa679e5945b8ce0b14', url='http://llvm.org/releases/3.5.1/llvm-3.5.1.src.tar.xz') - - depends_on('python@2.7:') - - def install(self, spec, prefix): - env['CXXFLAGS'] = self.compiler.cxx11_flag - - with working_dir('spack-build', create=True): - cmake('..', - '-DLLVM_REQUIRES_RTTI=1', - '-DPYTHON_EXECUTABLE=%s/bin/python' % spec['python'].prefix, - *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/lmdb/package.py b/var/spack/packages/lmdb/package.py deleted file mode 100644 index 875b8100c5..0000000000 --- a/var/spack/packages/lmdb/package.py +++ /dev/null @@ -1,39 +0,0 @@ -import os -from spack import * - -class Lmdb(Package): - """Read-only mirror of official repo on openldap.org. Issues and - pull requests here are ignored. Use OpenLDAP ITS for issues. - http://www.openldap.org/software/repo.html""" - - - homepage = "http://www.openldap.org/software/repo.html" - url = "https://github.com/LMDB/lmdb/archive/LMDB_0.9.16.tar.gz" - - version('0.9.16', '0de89730b8f3f5711c2b3a4ba517b648') - - def install(self, spec, prefix): - os.chdir('libraries/liblmdb') - - make() - - mkdirp(prefix.bin) - mkdirp(prefix + '/man/man1') - mkdirp(prefix.lib) - mkdirp(prefix.include) - - bins = ['mdb_stat', 'mdb_copy', 'mdb_dump', 'mdb_load'] - for f in bins: - install(f, prefix.bin) - - mans = ['mdb_stat.1', 'mdb_copy.1', 'mdb_dump.1', 'mdb_load.1'] - for f in mans: - install(f, prefix + '/man/man1') - - libs = ['liblmdb.a', 'liblmdb.so'] - for f in libs: - install(f, prefix.lib) - - includes = ['lmdb.h'] - for f in includes: - install(f, prefix.include) diff --git a/var/spack/packages/lua/package.py b/var/spack/packages/lua/package.py deleted file mode 100644 index 57c443cc2d..0000000000 --- a/var/spack/packages/lua/package.py +++ /dev/null @@ -1,26 +0,0 @@ -from spack import * -import os - -class Lua(Package): - """ The Lua programming language interpreter and library """ - homepage = "http://www.lua.org" - url = "http://www.lua.org/ftp/lua-5.1.5.tar.gz" - - version('5.3.1', '797adacada8d85761c079390ff1d9961') - version('5.3.0', 'a1b0a7e92d0c85bbff7a8d27bf29f8af') - version('5.2.4', '913fdb32207046b273fdb17aad70be13') - version('5.2.3', 'dc7f94ec6ff15c985d2d6ad0f1b35654') - version('5.2.2', 'efbb645e897eae37cad4344ce8b0a614') - version('5.2.1', 'ae08f641b45d737d12d30291a5e5f6e3') - version('5.2.0', 'f1ea831f397214bae8a265995ab1a93e') - version('5.1.5', '2e115fe26e435e33b0d5c022e4490567') - version('5.1.4', 'd0870f2de55d59c1c8419f36e8fac150') - version('5.1.3', 'a70a8dfaa150e047866dc01a46272599') - - depends_on('ncurses') - - def install(self, spec, prefix): - make('INSTALL_TOP=%s' % prefix, - 'MYLDFLAGS=-L%s/lib' % spec['ncurses'].prefix, - 'linux', - 'install') diff --git a/var/spack/packages/lwgrp/package.py b/var/spack/packages/lwgrp/package.py deleted file mode 100644 index 5963382b92..0000000000 --- a/var/spack/packages/lwgrp/package.py +++ /dev/null @@ -1,18 +0,0 @@ -import os -from spack import * - -class Lwgrp(Package): - """Thie light-weight group library provides process group - representations using O(log N) space and time.""" - - homepage = "https://github.com/hpc/lwgrp" - url = "https://github.com/hpc/lwgrp/releases/download/v1.0.2/lwgrp-1.0.2.tar.gz" - - version('1.0.2', 'ab7ba3bdd8534a651da5076f47f27d8a') - - depends_on('mpi') - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/lwm2/package.py b/var/spack/packages/lwm2/package.py deleted file mode 100644 index 31afff8816..0000000000 --- a/var/spack/packages/lwm2/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Lwm2(Package): - """LWM2: Light Weight Measurement Module. This is a PMPI module - that can collect a number of time-sliced MPI and POSIX I/O - measurements from a program. - """ - homepage = "https://jay.grs.rwth-aachen.de/redmine/projects/lwm2" - - version('torus', hg='https://jay.grs.rwth-aachen.de/hg/lwm2', revision='torus') - - depends_on("papi") - depends_on("mpi") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/matio/package.py b/var/spack/packages/matio/package.py deleted file mode 100644 index 12cfb80926..0000000000 --- a/var/spack/packages/matio/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - - -class Matio(Package): - """matio is an C library for reading and writing Matlab MAT files""" - homepage = "http://sourceforge.net/projects/matio/" - url = "http://downloads.sourceforge.net/project/matio/matio/1.5.2/matio-1.5.2.tar.gz" - - version('1.5.2', '85b007b99916c63791f28398f6a4c6f1') - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix) - - make() - make("install") diff --git a/var/spack/packages/memaxes/package.py b/var/spack/packages/memaxes/package.py deleted file mode 100644 index 76d5d3f831..0000000000 --- a/var/spack/packages/memaxes/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Memaxes(Package): - """MemAxes is a visualizer for sampled memory trace data.""" - - homepage = "https://github.com/scalability-llnl/MemAxes" - - version('0.5', '5874f3fda9fd2d313c0ff9684f915ab5', - url='https://github.com/scalability-llnl/MemAxes/archive/v0.5.tar.gz') - - depends_on("cmake@2.8.9:") - depends_on("qt@5:") - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('..', *std_cmake_args) - make() - make("install") - diff --git a/var/spack/packages/mesa/package.py b/var/spack/packages/mesa/package.py deleted file mode 100644 index 2a04a8fd51..0000000000 --- a/var/spack/packages/mesa/package.py +++ /dev/null @@ -1,34 +0,0 @@ -from spack import * - -class Mesa(Package): - """Mesa is an open-source implementation of the OpenGL - specification - a system for rendering interactive 3D graphics.""" - - homepage = "http://www.mesa3d.org" - url = "ftp://ftp.freedesktop.org/pub/mesa/older-versions/8.x/8.0.5/MesaLib-8.0.5.tar.gz" - # url = "ftp://ftp.freedesktop.org/pub/mesa/10.4.4/MesaLib-10.4.4.tar.gz" - - # version('10.4.4', '8d863a3c209bf5116b2babfccccc68ce') - version('8.0.5', 'cda5d101f43b8784fa60bdeaca4056f2') - - # mesa 7.x, 8.x, 9.x - depends_on("libdrm@2.4.33") - depends_on("llvm@3.0") - depends_on("libxml2") - - # patch("llvm-fixes.patch") # using newer llvm - - # mesa 10.x - # depends_on("py-mako") - # depends_on("flex") - # depends_on("bison") - # depends_on("dri2proto") - # depends_on("libxcb") - # depends_on("libxshmfence") - - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/metis/package.py b/var/spack/packages/metis/package.py deleted file mode 100644 index 7ce5ae1925..0000000000 --- a/var/spack/packages/metis/package.py +++ /dev/null @@ -1,27 +0,0 @@ -from spack import * - -class Metis(Package): - """METIS is a set of serial programs for partitioning graphs, - partitioning finite element meshes, and producing fill reducing - orderings for sparse matrices. The algorithms implemented in - METIS are based on the multilevel recursive-bisection, - multilevel k-way, and multi-constraint partitioning schemes.""" - - homepage = "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview" - url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz" - - version('5.1.0', '5465e67079419a69e0116de24fce58fe') - - depends_on('mpi') - - def install(self, spec, prefix): - cmake(".", - '-DGKLIB_PATH=%s/GKlib' % pwd(), - '-DSHARED=1', - '-DCMAKE_C_COMPILER=mpicc', - '-DCMAKE_CXX_COMPILER=mpicxx', - '-DSHARED=1', - *std_cmake_args) - - make() - make("install") diff --git a/var/spack/packages/mpc/package.py b/var/spack/packages/mpc/package.py deleted file mode 100644 index 6fbfca3007..0000000000 --- a/var/spack/packages/mpc/package.py +++ /dev/null @@ -1,42 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Mpc(Package): - """Gnu Mpc is a C library for the arithmetic of complex numbers - with arbitrarily high precision and correct rounding of the - result.""" - homepage = "http://www.multiprecision.org" - url = "ftp://ftp.gnu.org/gnu/mpc/mpc-1.0.2.tar.gz" - - version('1.0.2', '68fadff3358fb3e7976c7a398a0af4c3') - - depends_on("gmp") - depends_on("mpfr") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/mpe2/mpe2.patch b/var/spack/packages/mpe2/mpe2.patch deleted file mode 100644 index 3ade1f04f4..0000000000 --- a/var/spack/packages/mpe2/mpe2.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -rupN mpe2-1.3.0/src/graphics/src/mpe_graphics.c mpe2-1.3.0.new/src/graphics/src/mpe_graphics.c ---- mpe2-1.3.0/src/graphics/src/mpe_graphics.c 2009-06-15 10:36:22.000000000 -0600 -+++ mpe2-1.3.0.new/src/graphics/src/mpe_graphics.c 2014-10-25 00:11:22.000000000 -0600 -@@ -982,7 +982,7 @@ char *string; - return MPE_ERR_BAD_ARGS; - } - -- printf("color = %d, string = %s\n",(int) color, string); -+//printf("color = %d, string = %s\n",(int) color, string); - - XBSetPixVal( graph->xwin, graph->xwin->cmapping[color] ); - returnVal = XDrawString( graph->xwin->disp, XBDrawable(graph->xwin), diff --git a/var/spack/packages/mpe2/package.py b/var/spack/packages/mpe2/package.py deleted file mode 100644 index 27295172cc..0000000000 --- a/var/spack/packages/mpe2/package.py +++ /dev/null @@ -1,28 +0,0 @@ -from spack import * - -class Mpe2(Package): - """Message Passing Extensions (MPE) -- Parallel, shared X window graphics""" - - homepage = "http://www.mcs.anl.gov/research/projects/perfvis/software/MPE/" - url = "ftp://ftp.mcs.anl.gov/pub/mpi/mpe/mpe2-1.3.0.tar.gz" - - version('1.3.0', '67bf0c7b2e573df3ba0d2059a96c2f7b') - - patch('mpe2.patch') - - depends_on("mpi") - - provides("mpe") - - def install(self, spec, prefix): - configure("--prefix=" + prefix, - "--x-includes=/usr/X11R6/include", - "--x-libraries=/usr/X11R6/lib", - "--enable-mpe_graphics=yes", - "--disable-f77", - "--enable-viewers=no", - "--enable-slog2=no", - "--with-mpicc=mpicc") - - make() - make("install") diff --git a/var/spack/packages/mpfr/package.py b/var/spack/packages/mpfr/package.py deleted file mode 100644 index 9c744a22df..0000000000 --- a/var/spack/packages/mpfr/package.py +++ /dev/null @@ -1,41 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Mpfr(Package): - """The MPFR library is a C library for multiple-precision - floating-point computations with correct rounding.""" - homepage = "http://www.mpfr.org" - url = "http://www.mpfr.org/mpfr-current/mpfr-3.1.3.tar.bz2" - - version('3.1.3', '5fdfa3cfa5c86514ee4a241a1affa138') - # version('3.1.2', 'ee2c3ac63bf0c2359bf08fc3ee094c19') - - depends_on('gmp') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/mpibash/mpibash-4.3.patch b/var/spack/packages/mpibash/mpibash-4.3.patch deleted file mode 100644 index 17e285b0bf..0000000000 --- a/var/spack/packages/mpibash/mpibash-4.3.patch +++ /dev/null @@ -1,1565 +0,0 @@ -diff -Naur bash-4.3/builtins/circle.def mpibash-4.3/builtins/circle.def ---- bash-4.3/builtins/circle.def 1969-12-31 17:00:00.000000000 -0700 -+++ mpibash-4.3/builtins/circle.def 2014-05-13 11:27:37.314100671 -0600 -@@ -0,0 +1,620 @@ -+This file is circle.def, from which is created circle.c. -+It implements all of the "circle_*" builtins in Bash. -+ -+$PRODUCES circle.c -+ -+#include <config.h> -+ -+#include <stdio.h> -+#if defined (HAVE_UNISTD_H) -+# ifdef _MINIX -+# include <sys/types.h> -+# endif -+# include <unistd.h> -+#endif -+ -+#include "../bashintl.h" -+#include "../shell.h" -+#include "common.h" -+#include "bashgetopt.h" -+#include <libcircle.h> -+ -+extern int running_trap, trap_saved_exit_value; -+ -+static int circle_rank; /* Rank in the Libcircle job */ -+static SHELL_VAR *create_func = NULL; /* User-defined callback function for CIRCLE_cb_create. */ -+static SHELL_VAR *process_func = NULL; /* User-defined callback function for CIRCLE_cb_process. */ -+static SHELL_VAR *reduce_init_func = NULL; /* User-defined callback function for CIRCLE_cb_reduce_init. */ -+static SHELL_VAR *reduce_fini_func = NULL; /* User-defined callback function for CIRCLE_cb_reduce_fini. */ -+static SHELL_VAR *reduce_op_func = NULL; /* User-defined callback function for CIRCLE_cb_reduce_op. */ -+static CIRCLE_handle *current_handle = NULL; /* Active handle within a callback or NULL if not within a callback */ -+static int within_reduction = 0; /* 1=within a reduction callback; 0=not */ -+ -+/* Return with a usage message if no arguments remain. */ -+#define YES_ARGS(LIST) \ -+ if ((LIST) == 0) \ -+ { \ -+ builtin_usage (); \ -+ return (EX_USAGE); \ -+ } -+ -+/* Perform the same operation as bind_variable, but with VALUE being a -+ * number, not a string. */ -+static SHELL_VAR * -+bind_variable_number (name, value, flags) -+ const char *name; -+ long value; -+ int flags; -+{ -+ char numstr[25]; /* String version of VALUE */ -+ -+ sprintf (numstr, "%ld", value); -+ return bind_variable (name, numstr, flags); -+} -+ -+/* Invoke the user-defined creation-callback function (create_func). */ -+static void -+internal_create_func (handle) -+ CIRCLE_handle *handle; -+{ -+ WORD_LIST *funcargs; -+ -+ if (create_func == NULL) -+ return; -+ current_handle = handle; -+ funcargs = make_word_list (make_word ("cb_create"), NULL); -+ execute_shell_function (create_func, funcargs); -+ dispose_words (funcargs); -+ current_handle = NULL; -+} -+ -+/* Invoke the user-defined process-callback function (process_func). */ -+static void -+internal_process_func (handle) -+ CIRCLE_handle *handle; -+{ -+ WORD_LIST *funcargs; -+ -+ if (process_func == NULL) -+ return; -+ current_handle = handle; -+ funcargs = make_word_list (make_word ("cb_process"), NULL); -+ execute_shell_function (process_func, funcargs); -+ dispose_words (funcargs); -+ current_handle = NULL; -+} -+ -+/* Invoke the user-defined reduction-initiation callback function -+ * (reduce_init_func). */ -+static void -+internal_reduce_init_func (void) -+{ -+ WORD_LIST *funcargs; -+ -+ if (reduce_init_func == NULL) -+ return; -+ within_reduction = 1; -+ funcargs = make_word_list (make_word ("cb_reduce_init"), NULL); -+ execute_shell_function (reduce_init_func, funcargs); -+ dispose_words (funcargs); -+ within_reduction = 0; -+} -+ -+/* Invoke the user-defined reduction callback function -+ * (reduce_op_func). */ -+static void -+internal_reduce_op_func (buf1, size1, buf2, size2) -+ const void* buf1; -+ size_t size1; -+ const void* buf2; -+ size_t size2; -+{ -+ WORD_LIST *funcargs; -+ -+ if (reduce_op_func == NULL) -+ return; -+ within_reduction = 1; -+ funcargs = make_word_list (make_word (buf2), NULL); -+ funcargs = make_word_list (make_word (buf1), funcargs); -+ funcargs = make_word_list (make_word ("cb_reduce_op"), funcargs); -+ execute_shell_function (reduce_op_func, funcargs); -+ dispose_words (funcargs); -+ within_reduction = 0; -+} -+ -+/* Invoke the user-defined reduction-finalization callback function -+ * (reduce_fini_func). */ -+static void -+internal_reduce_fini_func (buf, size) -+ const void* buf; -+ size_t size; -+{ -+ WORD_LIST *funcargs; -+ -+ if (reduce_fini_func == NULL) -+ return; -+ funcargs = make_word_list (make_word (buf), NULL); -+ funcargs = make_word_list (make_word ("cb_reduce_fini"), funcargs); -+ execute_shell_function (reduce_fini_func, funcargs); -+ dispose_words (funcargs); -+} -+ -+/* Look up a user-provided callback function. */ -+static int -+find_callback_function (list, user_func) -+ WORD_LIST *list; -+ SHELL_VAR **user_func; -+{ -+ char *funcname; /* Name of the user-defined function. */ -+ -+ /* If no argument was provided, nullify the callback function. */ -+ if (list == NULL) -+ { -+ *user_func = NULL; -+ return EXECUTION_SUCCESS; -+ } -+ -+ /* Get the callback function. */ -+ funcname = list->word->word; -+ list = list->next; -+ no_args (list); -+ *user_func = find_function (funcname); -+ if (*user_func == NULL) -+ { -+ builtin_error (_("function %s not found"), funcname); -+ return EXECUTION_FAILURE; -+ } -+ return EXECUTION_SUCCESS; -+} -+ -+/* Initialize Libcircle. */ -+void -+initialize_libcircle (argc, argv) -+ int argc; -+ char **argv; -+{ -+ circle_rank = CIRCLE_init (argc, argv, CIRCLE_DEFAULT_FLAGS); -+ bind_variable_number ("circle_rank", circle_rank, 0); -+ CIRCLE_enable_logging (CIRCLE_LOG_WARN); -+ CIRCLE_cb_create (internal_create_func); -+ CIRCLE_cb_process (internal_process_func); -+ CIRCLE_cb_reduce_init (internal_reduce_init_func); -+ CIRCLE_cb_reduce_op (internal_reduce_op_func); -+ CIRCLE_cb_reduce_fini (internal_reduce_fini_func); -+} -+ -+/* Finalize Libcircle. */ -+void -+finalize_libcircle (void) -+{ -+ CIRCLE_finalize (); -+} -+ -+/* ---------------------------------------------------------------------- */ -+ -+$BUILTIN circle_set_options -+$FUNCTION circle_set_options_builtin -+$SHORT_DOC circle_set_options [flag]... -+Change Libcircle's run-time behavior. -+ -+Arguments: -+ FLAG "split_random", "split_equal", or "create_global" -+ -+Multiple flags can be provided. If no flags are provided, Libcircle -+reverts to its default options. -+ -+Exit Status: -+Returns 0 unless an invalid option is given. -+$END -+/*'*/ -+ -+/* Here is the circle_set_options builtin. */ -+int -+circle_set_options_builtin (list) -+ WORD_LIST *list; -+{ -+ char *word; /* One argument */ -+ int flags = 0; /* Flags to pass to CIRCLE_set_options */ -+ -+ if (list == NULL) -+ flags = CIRCLE_DEFAULT_FLAGS; -+ else -+ while (list != NULL) -+ { -+ word = list->word->word; -+ if (!strcmp (word, "split_random")) -+ flags |= CIRCLE_SPLIT_RANDOM; -+ else if (!strcmp (word, "split_equal")) -+ flags |= CIRCLE_SPLIT_EQUAL; -+ else if (!strcmp (word, "create_global")) -+ flags |= CIRCLE_CREATE_GLOBAL; -+ else -+ { -+ builtin_error (_("invalid flag \"%s\""), word); -+ return (EXECUTION_FAILURE); -+ } -+ list = list->next; -+ } -+ CIRCLE_set_options (flags); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_cb_create -+$FUNCTION circle_cb_create_builtin -+$SHORT_DOC circle_cb_create [func] -+Register a function that will create work when asked. -+ -+Arguments: -+ FUNC User-defined callback function that will invoke -+ circle_enqueue when called -+ -+If FUNC is omitted, no function will be associated with work creation. -+This can be used to nullify a previous circle_cb_create invocation. -+ -+Exit Status: -+Returns 0 unless an invalid function is given or an error occurs. -+$END -+ -+/* Here is the circle_cb_create builtin. */ -+int -+circle_cb_create_builtin (list) -+ WORD_LIST *list; -+{ -+ return find_callback_function (list, &create_func); -+} -+ -+$BUILTIN circle_cb_process -+$FUNCTION circle_cb_process_builtin -+$SHORT_DOC circle_cb_process [func] -+Register a function that will process work when asked. -+ -+Arguments: -+ FUNC User-defined callback function that will invoke -+ circle_enqueue when called -+ -+If FUNC is omitted, no function will be associated with work processing. -+This can be used to nullify a previous circle_cb_process invocation. -+ -+Exit Status: -+Returns 0 unless an invalid function is given or an error occurs. -+$END -+ -+/* Here is the circle_cb_process builtin. */ -+int -+circle_cb_process_builtin (list) -+ WORD_LIST *list; -+{ -+ return find_callback_function (list, &process_func); -+} -+ -+$BUILTIN circle_begin -+$FUNCTION circle_begin_builtin -+$SHORT_DOC circle_begin -+Begin creation and processing of the distributed work queue. -+ -+Exit Status: -+Returns 0 unless an error occurs. -+$END -+ -+/* Here is the circle_begin builtin. */ -+int -+circle_begin_builtin (list) -+ WORD_LIST *list; -+{ -+ no_args (list); -+ CIRCLE_begin (); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_enqueue -+$FUNCTION circle_enqueue_builtin -+$SHORT_DOC circle_enqueue work -+Enqueue work onto the distributed queue. -+ -+Arguments: -+ WORK "Work" as represented by an arbitrary string of limited -+ size (generally around 4KB) -+ -+Exit Status: -+Returns 0 unless an error occurs. -+$END -+ -+/* Here is the circle_enqueue builtin. */ -+int -+circle_enqueue_builtin (list) -+ WORD_LIST *list; -+{ -+ char *work; /* Work to perform */ -+ -+ /* Extract the work argument. */ -+ YES_ARGS (list); -+ work = list->word->word; -+ list = list->next; -+ no_args (list); -+ -+ /* Complain if we're not within a proper callback function. */ -+ if (current_handle == NULL) -+ { -+ builtin_error (_("not within a Libcircle \"create\" or \"process\" callback function")); -+ return EXECUTION_FAILURE; -+ } -+ -+ /* Enqueue the work. */ -+ if (current_handle->enqueue (work) == -1) -+ return EXECUTION_FAILURE; -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_dequeue -+$FUNCTION circle_dequeue_builtin -+$SHORT_DOC circle_dequeue var -+Dequeue work from the distributed queue into a variable. -+ -+Arguments: -+ VAR Variable in which to receive previously enqueued "work" -+ -+Exit Status: -+Returns 0 unless an error occurs. -+$END -+ -+/* Here is the circle_dequeue builtin. */ -+int -+circle_dequeue_builtin (list) -+ WORD_LIST *list; -+{ -+ char *varname; /* Variable in which to store the work string */ -+ char work[CIRCLE_MAX_STRING_LEN+1]; /* Work to perform */ -+ -+ /* Extract the variable-name argument. */ -+ YES_ARGS (list); -+ varname = list->word->word; -+ list = list->next; -+ no_args (list); -+ -+ /* Complain if we're not within a callback function. */ -+ if (current_handle == NULL) -+ { -+ builtin_error (_("not within a Libcircle callback function")); -+ return EXECUTION_FAILURE; -+ } -+ -+ /* Dequeue the work and bind it to the given variable. */ -+ if (current_handle->dequeue (work) == -1) -+ return EXECUTION_FAILURE; -+ bind_variable (varname, work, 0); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_enable_logging -+$FUNCTION circle_enable_logging_builtin -+$SHORT_DOC circle_enable_logging log_level -+Change Libcircle's logging verbosity -+ -+Arguments: -+ LOG_LEVEL "fatal", "error", "warning", "info", or "debug" -+ -+Exit Status: -+Returns 0 unless an invalid option is given. -+$END -+/*'*/ -+ -+/* Here is the circle_enable_logging builtin. */ -+int -+circle_enable_logging_builtin (list) -+ WORD_LIST *list; -+{ -+ char *word; /* One argument */ -+ CIRCLE_loglevel loglevel; /* Level to set */ -+ -+ /* Parse the log level. */ -+ YES_ARGS (list); -+ word = list->word->word; -+ if (!strcmp (word, "fatal")) -+ loglevel = CIRCLE_LOG_FATAL; -+ else if (!strcmp (word, "error")) -+ loglevel = CIRCLE_LOG_ERR; -+ else if (!strcmp (word, "warning")) -+ loglevel = CIRCLE_LOG_WARN; -+ else if (!strcmp (word, "info")) -+ loglevel = CIRCLE_LOG_INFO; -+ else if (!strcmp (word, "debug")) -+ loglevel = CIRCLE_LOG_DBG; -+ else -+ { -+ builtin_error (_("invalid log level \"%s\""), word); -+ return (EXECUTION_FAILURE); -+ } -+ -+ /* Set the log level. */ -+ CIRCLE_enable_logging (loglevel); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_abort -+$FUNCTION circle_abort_builtin -+$SHORT_DOC circle_abort -+Terminate queue processing. -+ -+Exit Status: -+Returns 0 unless an error occurs. -+$END -+ -+/* Here is the circle_abort builtin. */ -+int -+circle_abort_builtin (list) -+ WORD_LIST *list; -+{ -+ no_args (list); -+ CIRCLE_abort (); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_checkpoint -+$FUNCTION circle_checkpoint_builtin -+$SHORT_DOC circle_checkpoint -+Checkpoint a work queue to disk. -+ -+Write a file called circle${circle_rank}.txt containing the current -+queue state of rank ${circle_rank}. On a later run, a worker can -+invoke circle_read_restarts to repopulate its queue from such a -+checkpoint file. -+ -+Exit Status: -+Returns 0 unless an error occurs. -+$END -+/*'*/ -+ -+/* Here is the circle_checkpoint builtin. */ -+int -+circle_checkpoint_builtin (list) -+ WORD_LIST *list; -+{ -+ no_args (list); -+ CIRCLE_checkpoint (); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_read_restarts -+$FUNCTION circle_read_restarts_builtin -+$SHORT_DOC circle_read_restarts -+Repopulate a work queue from a disk checkpoint. -+ -+Read queue contents from a file called circle${circle_rank}.txt, which -+was previously produced by circle_checkpoint. -+ -+Exit Status: -+Returns 0 unless an error occurs. -+$END -+/*'*/ -+ -+/* Here is the circle_read_restarts builtin. */ -+int -+circle_read_restarts_builtin (list) -+ WORD_LIST *list; -+{ -+ no_args (list); -+ CIRCLE_read_restarts (); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN circle_cb_reduce_init -+$FUNCTION circle_cb_reduce_init_builtin -+$SHORT_DOC circle_cb_reduce_init [func] -+Register a function that will initiate a reduction operation. -+ -+Arguments: -+ FUNC User-defined callback function that will invoke -+ circle_reduce when called -+ -+FUNC will be invoked on all ranks. -+ -+If FUNC is omitted, no function will be associated with reduction -+initialization. This can be used to nullify a previous -+circle_cb_reduce_init invocation. -+ -+Exit Status: -+Returns 0 unless an invalid function is given or an error occurs. -+$END -+ -+/* Here is the circle_cb_reduce_init builtin. */ -+int -+circle_cb_reduce_init_builtin (list) -+ WORD_LIST *list; -+{ -+ return find_callback_function (list, &reduce_init_func); -+} -+ -+$BUILTIN circle_cb_reduce_op -+$FUNCTION circle_cb_reduce_op_builtin -+$SHORT_DOC circle_cb_reduce_op [func] -+Register a function that will complete a reduction operation. -+ -+Arguments: -+ FUNC User-defined callback function that will receive -+ two items to reduce and invoke circle_reduce on -+ the reduced value -+ -+If FUNC is omitted, no function will be associated with reduction -+execution. This can be used to nullify a previous circle_cb_reduce_op -+invocation. -+ -+Exit Status: -+Returns 0 unless an invalid function is given or an error occurs. -+$END -+ -+/* Here is the circle_cb_reduce_op builtin. */ -+int -+circle_cb_reduce_op_builtin (list) -+ WORD_LIST *list; -+{ -+ return find_callback_function (list, &reduce_op_func); -+} -+ -+$BUILTIN circle_cb_reduce_fini -+$FUNCTION circle_cb_reduce_fini_builtin -+$SHORT_DOC circle_cb_reduce_fini [func] -+Register a function that will complete a reduction operation. -+ -+Arguments: -+ FUNC User-defined callback function that will receive -+ the final reduced data -+ -+If FUNC is omitted, no function will be associated with reduction -+completion. This can be used to nullify a previous -+circle_cb_reduce_fini invocation. -+ -+Libcircle guarantees that FUNC will be invoked only on rank 0. -+ -+Exit Status: -+Returns 0 unless an invalid function is given or an error occurs. -+$END -+ -+/* Here is the circle_cb_reduce_fini builtin. */ -+int -+circle_cb_reduce_fini_builtin (list) -+ WORD_LIST *list; -+{ -+ return find_callback_function (list, &reduce_fini_func); -+} -+ -+$BUILTIN circle_reduce -+$FUNCTION circle_reduce_builtin -+$SHORT_DOC circle_reduce work -+Seed the next phase of a reduction operation -+ -+Arguments: -+ WORK "Work" as represented by an arbitrary string of limited -+ size (generally around 4KB) -+ -+This function should be called both by the callback function -+registered with circle_reduce_init and the callback function -+registered with circle_reduce_op. -+ -+Exit Status: -+Returns 0 unless an error occurs. -+$END -+ -+/* Here is the circle_reduce builtin. */ -+int -+circle_reduce_builtin (list) -+ WORD_LIST *list; -+{ -+ char *work; /* Work to perform */ -+ -+ /* Extract the work argument. */ -+ YES_ARGS (list); -+ work = list->word->word; -+ list = list->next; -+ no_args (list); -+ -+ /* Complain if we're not within a proper callback function. */ -+ if (!within_reduction) -+ { -+ builtin_error (_("not within a Libcircle \"reduce_init\" or \"reduce_op\" callback function")); -+ return EXECUTION_FAILURE; -+ } -+ -+ /* Reduce the work. */ -+ CIRCLE_reduce (work, strlen (work)); -+ return EXECUTION_SUCCESS; -+} -diff -Naur bash-4.3/builtins/Makefile.in mpibash-4.3/builtins/Makefile.in ---- bash-4.3/builtins/Makefile.in 2012-05-25 07:29:19.000000000 -0600 -+++ mpibash-4.3/builtins/Makefile.in 2014-05-13 11:27:37.314100671 -0600 -@@ -141,7 +141,9 @@ - $(srcdir)/times.def $(srcdir)/trap.def $(srcdir)/type.def \ - $(srcdir)/ulimit.def $(srcdir)/umask.def $(srcdir)/wait.def \ - $(srcdir)/reserved.def $(srcdir)/pushd.def $(srcdir)/shopt.def \ -- $(srcdir)/printf.def $(srcdir)/complete.def $(srcdir)/mapfile.def -+ $(srcdir)/printf.def $(srcdir)/complete.def $(srcdir)/mapfile.def \ -+ $(srcdir)/mpi.def \ -+@CIRCLE@ $(srcdir)/circle.def - - STATIC_SOURCE = common.c evalstring.c evalfile.c getopt.c bashgetopt.c \ - getopt.h -@@ -153,7 +155,9 @@ - jobs.o kill.o let.o mapfile.o \ - pushd.o read.o return.o set.o setattr.o shift.o source.o \ - suspend.o test.o times.o trap.o type.o ulimit.o umask.o \ -- wait.o getopts.o shopt.o printf.o getopt.o bashgetopt.o complete.o -+ wait.o getopts.o shopt.o printf.o getopt.o bashgetopt.o complete.o \ -+ mpi.o \ -+@CIRCLE@ circle.o - - CREATED_FILES = builtext.h builtins.c psize.aux pipesize.h tmpbuiltins.c \ - tmpbuiltins.h -@@ -317,6 +321,8 @@ - getopts.o: getopts.def - reserved.o: reserved.def - complete.o: complete.def -+@CIRCLE@ circle.o: circle.def -+mpi.o: mpi.def - - # C files - bashgetopt.o: ../config.h $(topdir)/bashansi.h $(BASHINCDIR)/ansi_stdlib.h -@@ -644,6 +650,19 @@ - mapfile.o: $(topdir)/subst.h $(topdir)/externs.h $(BASHINCDIR)/maxpath.h - mapfile.o: $(topdir)/shell.h $(topdir)/syntax.h $(topdir)/variables.h $(topdir)/conftypes.h - mapfile.o: $(topdir)/arrayfunc.h ../pathnames.h -+@CIRCLE@ circle.o: $(topdir)/command.h ../config.h $(BASHINCDIR)/memalloc.h $(topdir)/error.h -+@CIRCLE@ circle.o: $(topdir)/general.h $(topdir)/xmalloc.h $(topdir)/subst.h $(topdir)/externs.h -+@CIRCLE@ circle.o: $(topdir)/quit.h $(topdir)/dispose_cmd.h $(topdir)/make_cmd.h -+@CIRCLE@ circle.o: $(topdir)/shell.h $(topdir)/syntax.h $(topdir)/unwind_prot.h $(topdir)/variables.h $(topdir)/conftypes.h -+@CIRCLE@ circle.o: $(BASHINCDIR)/maxpath.h ../pathnames.h -+mpi.o: ../config.h ../config-top.h ../config-bot.h ../bashintl.h -+mpi.o: ../include/gettext.h ../shell.h ../config.h ../bashjmp.h -+mpi.o: ../include/posixjmp.h ../command.h ../syntax.h ../general.h -+mpi.o: ../bashtypes.h ../include/chartypes.h ../xmalloc.h ../bashansi.h -+mpi.o: ../error.h ../variables.h ../array.h ../assoc.h ../hashlib.h -+mpi.o: ../conftypes.h ../arrayfunc.h ../quit.h ../sig.h ../include/maxpath.h -+mpi.o: ../unwind_prot.h ../dispose_cmd.h ../make_cmd.h ../include/ocache.h -+mpi.o: ../subst.h ../pathnames.h ../externs.h common.h bashgetopt.h - - #bind.o: $(RL_LIBSRC)chardefs.h $(RL_LIBSRC)readline.h $(RL_LIBSRC)keymaps.h - -diff -Naur bash-4.3/builtins/mpi.def mpibash-4.3/builtins/mpi.def ---- bash-4.3/builtins/mpi.def 1969-12-31 17:00:00.000000000 -0700 -+++ mpibash-4.3/builtins/mpi.def 2014-05-13 11:27:37.314100671 -0600 -@@ -0,0 +1,744 @@ -+This file is mpi.def, from which is created mpi.c. -+It implements all of the "mpi_*" builtins in Bash. -+ -+$PRODUCES mpi.c -+ -+#include <config.h> -+ -+#include <stdio.h> -+#if defined (HAVE_UNISTD_H) -+# ifdef _MINIX -+# include <sys/types.h> -+# endif -+# include <unistd.h> -+#endif -+ -+#include "../bashintl.h" -+#include "../shell.h" -+#include "common.h" -+#include "bashgetopt.h" -+#include <mpi.h> -+ -+extern int running_trap, trap_saved_exit_value; -+ -+/* Keep track of who we are within MPI_COMM_WORLD. */ -+static int mpi_rank; -+static int mpi_num_ranks; -+ -+/* Try an MPI operation. Return with an error message on failure. */ -+#define MPI_TRY(STMT) \ -+ do \ -+ { \ -+ int mpierr; \ -+ mpierr = STMT; \ -+ if (mpierr != MPI_SUCCESS) \ -+ return report_mpi_error (mpierr); \ -+ } \ -+ while (0) -+ -+/* Return with a usage message if no arguments remain. */ -+#define YES_ARGS(LIST) \ -+ if ((LIST) == 0) \ -+ { \ -+ builtin_usage (); \ -+ return (EX_USAGE); \ -+ } -+ -+/* Return with an error message if a given variable is read-only or if -+ * we can't write to it for any other reason (e.g., it's defined as a -+ * function). */ -+#define REQUIRE_WRITABLE(NAME) \ -+ do \ -+ { \ -+ SHELL_VAR *bindvar = find_shell_variable (NAME); \ -+ if (bindvar) \ -+ { \ -+ if (readonly_p (bindvar)) \ -+ { \ -+ err_readonly (NAME); \ -+ return (EXECUTION_FAILURE); \ -+ } \ -+ if (unbind_variable (NAME) == -1) \ -+ { \ -+ builtin_error ("Failed to write to variable %s", NAME); \ -+ return (EXECUTION_FAILURE); \ -+ } \ -+ } \ -+ } \ -+ while (0) -+ -+/* Initialize MPI. */ -+void -+initialize_mpi (argc, argv) -+ int argc; -+ char **argv; -+{ -+ int init_done; -+ -+ MPI_Initialized (&init_done); -+ if (!init_done) -+ MPI_Init (&argc, &argv); -+ MPI_Errhandler_set (MPI_COMM_WORLD, MPI_ERRORS_RETURN); -+ MPI_Comm_rank (MPI_COMM_WORLD, &mpi_rank); -+ MPI_Comm_size (MPI_COMM_WORLD, &mpi_num_ranks); -+} -+ -+/* Finalize MPI. */ -+void -+finalize_mpi () -+{ -+ MPI_Finalize (); -+} -+ -+/* Parse an operation name into an MPI_Op. Return 1 on success, 0 on -+ * failure. */ -+static int -+parse_operation (char *name, MPI_Op *op) -+{ -+ /* Define a mapping from operator names to MPI_Op values. */ -+ typedef struct { -+ char *name; /* Operation name (e.g., "sum") */ -+ MPI_Op value; /* Operation value (e.g., MPI_SUM) */ -+ } opname2value_t; -+ static opname2value_t oplist[] = { -+ {"max", MPI_MAX}, -+ {"min", MPI_MIN}, -+ {"sum", MPI_SUM}, -+ {"prod", MPI_PROD}, -+ {"land", MPI_LAND}, -+ {"band", MPI_BAND}, -+ {"lor", MPI_LOR}, -+ {"bor", MPI_BOR}, -+ {"lxor", MPI_LXOR}, -+ {"bxor", MPI_BXOR}, -+ {"maxloc", MPI_MAXLOC}, -+ {"minloc", MPI_MINLOC} -+ }; -+ size_t i; -+ -+ for (i = 0; i < sizeof(oplist)/sizeof(opname2value_t); i++) -+ if (!strcmp(name, oplist[i].name)) -+ { -+ *op = oplist[i].value; -+ if (i > 0) -+ { -+ /* As a performance optimization, bubble up the value we -+ * just found. */ -+ opname2value_t prev = oplist[i - 1]; -+ oplist[i - 1] = oplist[i]; -+ oplist[i] = prev; -+ } -+ return 1; -+ } -+ return 0; -+} -+ -+/* Report an error to the user and return EXECUTION_FAILURE. */ -+static int -+report_mpi_error (mpierr) -+ int mpierr; -+{ -+ char errstr[MPI_MAX_ERROR_STRING]; -+ int errstrlen; -+ -+ MPI_Error_string (mpierr, errstr, &errstrlen); -+ builtin_error ("%s", errstr); -+ return EXECUTION_FAILURE; -+} -+ -+/* Perform the same operation as bind_variable, but with VALUE being a -+ * number, not a string. */ -+static SHELL_VAR * -+bind_variable_number (name, value, flags) -+ const char *name; -+ long value; -+ int flags; -+{ -+ char numstr[25]; /* String version of VALUE */ -+ -+ sprintf (numstr, "%ld", value); -+ return bind_variable (name, numstr, flags); -+} -+ -+/* Perform the same operation as bind_array_variable, but with VALUE -+ * being a number, not a string. */ -+static SHELL_VAR * -+bind_array_variable_number (name, ind, value, flags) -+ char *name; -+ arrayind_t ind; -+ long value; -+ int flags; -+{ -+ char numstr[25]; /* String version of VALUE */ -+ -+ sprintf (numstr, "%ld", value); -+ return bind_array_variable (name, ind, numstr, flags); -+} -+ -+/* Define a reduction-type function (allreduce, scan, exscan, etc.). */ -+typedef int (*reduction_func_t)(void *, void *, int, MPI_Datatype, MPI_Op, MPI_Comm); -+ -+/* Perform any reduction-type operation (allreduce, scan, exscan, etc.). */ -+static int -+reduction_like (list, funcname, func) -+ WORD_LIST *list; -+ char *funcname; -+ reduction_func_t func; -+{ -+ char *word; /* One argument */ -+ struct { -+ long int value; /* Reduced value */ -+ int rank; /* Rank associated with the above */ -+ } number, result; -+ MPI_Op operation = MPI_SUM; /* Operation to perform */ -+ char *varname; /* Name of the variable to bind the results to */ -+ intmax_t n; -+ int i; -+ -+ /* Parse "-O OPERATION" (optional), where OPERATION is a reduction -+ * operation. */ -+ YES_ARGS (list); -+ word = list->word->word; -+ if (ISOPTION (word, 'O')) -+ { -+ list = list->next; -+ if (list == 0) -+ { -+ sh_needarg (funcname); -+ return (EX_USAGE); -+ } -+ word = list->word->word; -+ if (!parse_operation (word, &operation)) -+ { -+ sh_invalidopt ("-O"); -+ return (EX_USAGE); -+ } -+ list = list->next; -+ } -+ -+ /* Parse the argument, which must be a number. */ -+ YES_ARGS (list); -+ word = list->word->word; -+ if (!legal_number (word, &n)) -+ { -+ sh_neednumarg (funcname); -+ return (EX_USAGE); -+ } -+ number.value = (long int) n; -+ number.rank = mpi_rank; -+ list = list->next; -+ -+ /* Parse the target variable, which must not be read-only. */ -+ YES_ARGS (list); -+ varname = list->word->word; -+ if (mpi_rank != 0 || func != MPI_Exscan) -+ REQUIRE_WRITABLE (varname); -+ list = list->next; -+ no_args (list); -+ -+ /* Perform the reduction operation. Bind the given array variable -+ * to the result and, for minloc/maxloc, the associated rank. */ -+ if (mpi_rank != 0 || func != MPI_Exscan) { -+ bind_array_variable (varname, 0, "", 0); -+ bind_array_variable (varname, 1, "", 0); -+ } -+ if (operation == MPI_MINLOC || operation == MPI_MAXLOC) -+ { -+ MPI_TRY (func (&number, &result, 1, MPI_LONG_INT, operation, MPI_COMM_WORLD)); -+ if (mpi_rank != 0 || func != MPI_Exscan) -+ bind_array_variable_number (varname, 1, result.rank, 0); -+ } -+ else -+ MPI_TRY (func (&number.value, &result.value, 1, MPI_LONG, operation, MPI_COMM_WORLD)); -+ if (mpi_rank != 0 || func != MPI_Exscan) -+ bind_array_variable_number (varname, 0, result.value, 0); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN mpi_comm_rank -+$FUNCTION mpi_comm_rank_builtin -+$SHORT_DOC mpi_comm_rank name -+Return the process's rank in the MPI job. -+ -+Arguments: -+ NAME Scalar variable in which to receive the rank -+ -+Exit Status: -+Returns 0 unless an invalid option is given. -+$END -+/*'*/ -+ -+/* Here is the mpi_comm_rank builtin. */ -+int -+mpi_comm_rank_builtin (list) -+ WORD_LIST *list; -+{ -+ char *varname; /* Name of the variable to bind the results to */ -+ -+ YES_ARGS (list); -+ varname = list->word->word; -+ REQUIRE_WRITABLE (varname); -+ list = list->next; -+ no_args (list); -+ bind_variable_number (varname, mpi_rank, 0); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN mpi_comm_size -+$FUNCTION mpi_comm_size_builtin -+$SHORT_DOC mpi_comm_size name -+Return the total number of ranks in the MPI job. -+ -+Arguments: -+ NAME Scalar variable in which to receive the number of ranks -+ -+Exit Status: -+Returns 0 unless an invalid option is given. -+$END -+ -+/* Here is the mpi_comm_size builtin. */ -+int -+mpi_comm_size_builtin (list) -+ WORD_LIST *list; -+{ -+ char *varname; /* Name of the variable to bind the results to */ -+ -+ YES_ARGS (list); -+ varname = list->word->word; -+ REQUIRE_WRITABLE (varname); -+ list = list->next; -+ no_args (list); -+ bind_variable_number (varname, mpi_num_ranks, 0); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN mpi_abort -+$FUNCTION mpi_abort_builtin -+$SHORT_DOC mpi_abort [n] -+Abort all processes in the MPI job and exit the shell. -+ -+Exits not only the caller's shell (with a status of N) but also all -+remote shells that are part of the same MPI job. If N is omitted, the -+exit status is that of the last command executed. -+ -+This command should be used only in extreme circumstances. It is -+better for each process to exit normally on its own. -+$END -+/*'*/ -+ -+/* Here is the mpi_abort builtin. */ -+int -+mpi_abort_builtin (list) -+ WORD_LIST *list; -+{ -+ int exit_value; -+ -+ exit_value = (running_trap == 1 && list == 0) ? trap_saved_exit_value : get_exitstat (list); /* Copied from exit.def */ -+ MPI_TRY (MPI_Abort (MPI_COMM_WORLD, exit_value)); -+ return EXECUTION_FAILURE; -+} -+ -+$BUILTIN mpi_send -+$FUNCTION mpi_send_builtin -+$SHORT_DOC mpi_send [-t tag] rank message -+Send a message to a remote process in the same MPI job. -+ -+Options: -+ -t TAG Send the message using tag TAG (default: 0). TAG must -+ be a nonnegative integer. -+ -+Arguments: -+ RANK Whom to send the message to. RANK must be an integer in -+ the range [0, $(mpi_comm_size)-1]. -+ -+ MESSAGE String to send to rank RANK. -+ -+Exit Status: -+Returns 0 unless an invalid option is given or an error occurs. -+$END -+ -+/* Here is the mpi_send builtin. */ -+int -+mpi_send_builtin (list) -+ WORD_LIST *list; -+{ -+ char *word; /* One argument */ -+ intmax_t target_rank; /* MPI target rank */ -+ char *message; /* Message to send to rank target_rank */ -+ intmax_t tag = 0; /* Message tag to use */ -+ -+ /* Parse "-t TAG" (optional), where TAG is a number or "any". */ -+ YES_ARGS (list); -+ word = list->word->word; -+ if (ISOPTION (word, 't')) -+ { -+ list = list->next; -+ if (list == 0) -+ { -+ sh_needarg ("mpi_recv"); -+ return (EX_USAGE); -+ } -+ word = list->word->word; -+ if (!legal_number (word, &tag)) -+ { -+ sh_neednumarg ("-t"); -+ return (EX_USAGE); -+ } -+ list = list->next; -+ } -+ else if (*word == '-') -+ { -+ sh_invalidopt (word); -+ builtin_usage (); -+ return (EX_USAGE); -+ } -+ -+ /* Parse the target rank, which must be a number. */ -+ YES_ARGS (list); -+ word = list->word->word; -+ if (!legal_number (word, &target_rank)) -+ { -+ builtin_error (_("mpi_send: numeric rank required")); -+ return (EX_USAGE); -+ } -+ list = list->next; -+ -+ /* Parse the message to send. */ -+ YES_ARGS (list); -+ message = list->word->word; -+ list = list->next; -+ no_args (list); -+ -+ /* Send the message. */ -+ MPI_TRY (MPI_Send (message, strlen(message)+1, MPI_BYTE, (int)target_rank, (int)tag, MPI_COMM_WORLD)); -+ return EXECUTION_SUCCESS; -+} -+ -+ -+$BUILTIN mpi_recv -+$FUNCTION mpi_recv_builtin -+$SHORT_DOC mpi_recv [-t tag] rank name -+Receive a message from a remote process in the same MPI job. -+ -+Options: -+ -t TAG Receive only messages sent using tag TAG (default: 0). -+ TAG must be either a nonnegative integer or the string -+ "any" to receive messages sent using any tag. -+ -+Arguments: -+ RANK Receive only messages sent from sender RANK. RANK -+ must either be in the range [0, $(mpi_comm_size)-1] or -+ be the string "any" to receive messages from any sender. -+ -+ NAME Array variable in which to receive the message, sender -+ rank, and tag. -+ -+Exit Status: -+Returns 0 unless an invalid option is given or an error occurs. -+$END -+ -+/* Here is the mpi_recv builtin. */ -+int -+mpi_recv_builtin (list) -+ WORD_LIST *list; -+{ -+ char *word; /* One argument */ -+ intmax_t source_rank; /* MPI source rank */ -+ char *endptr; /* Used for parsing strings into numbers */ -+ MPI_Status status; /* Status of an MPI operation */ -+ int count; /* Message length in bytes */ -+ intmax_t tag = 0; /* Message tag to use */ -+ char *varname; /* Name of the variable to bind the results to */ -+ static char *message = NULL; /* Message received from MPI */ -+ static size_t alloced = 0; /* Number of bytes allocated for the above */ -+ int opt; /* Parsed option */ -+ -+ /* Parse any options provided. */ -+ reset_internal_getopt (); -+ while ((opt = internal_getopt (list, "t:")) != -1) -+ { -+ switch (opt) -+ { -+ case 't': -+ if (!strcmp (list_optarg, "any")) -+ tag = MPI_ANY_TAG; -+ else if (!legal_number (list_optarg, &tag)) -+ { -+ builtin_error (_("-t: numeric argument or \"any\" required")); -+ return (EX_USAGE); -+ } -+ break; -+ -+ default: -+ sh_invalidopt (word); -+ builtin_usage (); -+ return (EX_USAGE); -+ } -+ } -+ list = loptend; -+ -+ /* Parse the source rank, which must be a number or "any". */ -+ YES_ARGS (list); -+ word = list->word->word; -+ if (!legal_number (word, &source_rank)) -+ { -+ if (!strcmp (word, "any")) -+ source_rank = MPI_ANY_SOURCE; -+ else -+ { -+ builtin_error (_("mpi_recv: numeric rank or \"any\" required")); -+ return (EX_USAGE); -+ } -+ } -+ list = list->next; -+ -+ /* Parse the target variable, which must not be read-only. */ -+ YES_ARGS (list); -+ varname = list->word->word; -+ REQUIRE_WRITABLE (varname); -+ list = list->next; -+ no_args (list); -+ -+ /* Receive a message. Because we don't know long the message will -+ * be, we first probe to get the length. */ -+ MPI_TRY (MPI_Probe ((int)source_rank, (int)tag, MPI_COMM_WORLD, &status)); -+ MPI_TRY (MPI_Get_count (&status, MPI_BYTE, &count)); -+ if (alloced < count) -+ { -+ message = xrealloc (message, count); -+ alloced = count; -+ } -+ MPI_TRY (MPI_Recv (message, count, MPI_BYTE, status.MPI_SOURCE, status.MPI_TAG, MPI_COMM_WORLD, &status)); -+ bind_array_variable (varname, 0, message, 0); -+ bind_array_variable_number (varname, 1, status.MPI_SOURCE, 0); -+ bind_array_variable_number (varname, 2, status.MPI_TAG, 0); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN mpi_barrier -+$FUNCTION mpi_barrier_builtin -+$SHORT_DOC mpi_barrier -+Synchronizes all of the processes in the MPI job. -+ -+No process will return from mpi_barrier until all processes have -+called mpi_barrier. -+ -+Exit Status: -+Returns 0 unless an invalid option is given or an error occurs. -+$END -+ -+/* Here is the mpi_barrier builtin. */ -+int -+mpi_barrier_builtin (list) -+ WORD_LIST *list; -+{ -+ no_args (list); -+ MPI_TRY (MPI_Barrier (MPI_COMM_WORLD)); -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN mpi_bcast -+$FUNCTION mpi_bcast_builtin -+$SHORT_DOC mpi_bcast [message] name -+Broadcast a message to all processes in the same MPI job. -+ -+Arguments: -+ MESSAGE String to broadcast from one process to all the others. -+ -+ NAME Scalar variable in which to receive the broadcast message. -+ -+Exactly one process in the MPI job must specify a message to -+broadcast. No process will return from mpi_bcast until all processes -+have called mpi_bcast. -+ -+Exit Status: -+Returns 0 unless an invalid option is given or an error occurs. -+$END -+ -+/* Here is the mpi_bcast builtin. */ -+int -+mpi_bcast_builtin (list) -+ WORD_LIST *list; -+{ -+ char *word; /* One argument */ -+ int root; /* MPI root rank */ -+ char *root_message; /* Message to broadcast */ -+ int msglen; /* Length in bytes of the above (including the NULL byte) */ -+ char *varname; /* Name of the variable to bind the results to */ -+ static int *all_lengths = NULL; /* List of every rank's msglen */ -+ static char *message = NULL; /* Message received from the root */ -+ static int alloced = 0; /* Bytes allocated for the above */ -+ int i; -+ -+ /* Parse the optional message and target variable, which must not be -+ * read-only. */ -+ YES_ARGS (list); -+ if (list->next == NULL) -+ { -+ /* Non-root */ -+ root_message = NULL; -+ msglen = -1; -+ } -+ else -+ { -+ /* Root */ -+ root_message = list->word->word; -+ msglen = (int) strlen(root_message) + 1; -+ list = list->next; -+ } -+ varname = list->word->word; -+ REQUIRE_WRITABLE (varname); -+ list = list->next; -+ no_args (list); -+ -+ /* Acquire global agreement on the root and the message size. */ -+ if (all_lengths == NULL) -+ all_lengths = xmalloc (mpi_num_ranks*sizeof(int)); -+ MPI_TRY (MPI_Allgather (&msglen, 1, MPI_INT, all_lengths, 1, MPI_INT, MPI_COMM_WORLD)); -+ root = -1; -+ for (i = 0; i < mpi_num_ranks; i++) -+ { -+ if (all_lengths[i] == -1) -+ continue; -+ if (root != -1) -+ { -+ builtin_error (_("mpi_bcast: more than one process specified a message")); -+ return (EXECUTION_FAILURE); -+ } -+ root = i; -+ msglen = all_lengths[i]; -+ } -+ if (root == -1) -+ { -+ builtin_error (_("mpi_bcast: no process specified a message")); -+ return (EXECUTION_FAILURE); -+ } -+ -+ /* Broadcast the message. */ -+ if (mpi_rank == root) -+ { -+ MPI_TRY (MPI_Bcast (root_message, msglen, MPI_BYTE, root, MPI_COMM_WORLD)); -+ bind_variable (varname, root_message, 0); -+ } -+ else -+ { -+ if (alloced < msglen) -+ { -+ message = xrealloc (message, msglen); -+ alloced = msglen; -+ } -+ MPI_TRY (MPI_Bcast (message, msglen, MPI_BYTE, root, MPI_COMM_WORLD)); -+ bind_variable (varname, message, 0); -+ } -+ return EXECUTION_SUCCESS; -+} -+ -+$BUILTIN mpi_scan -+$FUNCTION mpi_scan_builtin -+$SHORT_DOC mpi_scan number name -+Perform an inclusive scan across all processes in the same MPI job. -+ -+ -O OPERATION Operation to perform. Must be one of "max", "min", -+ "sum", "prod", "land", "band", "lor", "bor", "lxor", -+ "bxor", "maxloc", or "minloc" (default: "sum"). -+ -+Arguments: -+ NUMBER Integer to use in the scan operation. -+ -+ NAME Array variable in which to receive the result and, in -+ the case of maxloc and minloc, the associated rank. -+ -+In an inclusive-scan operation, each process i presents a number, -+a[i]. Once all processes in the MPI job have presented their number, -+the command returns a[0] to rank 0, a[0]+a[1] to rank 1, -+a[0]+a[1]+a[2] to rank 2, and so forth. The -O option enables "+" to -+be replaced with other operations. -+ -+Inclusive scans can be useful for assigning a unique index to each -+process in the MPI job. -+ -+Exit Status: -+Returns 0 unless an invalid option is given or an error occurs. -+$END -+ -+/* Here is the mpi_scan builtin. */ -+int -+mpi_scan_builtin (list) -+ WORD_LIST *list; -+{ -+ return reduction_like (list, "mpi_scan", MPI_Scan); -+} -+ -+$BUILTIN mpi_exscan -+$FUNCTION mpi_exscan_builtin -+$SHORT_DOC mpi_exscan number name -+Perform an exclusive scan across all processes in the same MPI job. -+ -+ -O OPERATION Operation to perform. Must be one of "max", "min", -+ "sum", "prod", "land", "band", "lor", "bor", "lxor", -+ "bxor", "maxloc", or "minloc" (default: "sum"). -+ -+Arguments: -+ NUMBER Integer to use in the scan operation. -+ -+ NAME Array variable in which to receive the result and, in -+ the case of maxloc and minloc, the associated rank. -+ -+In a exclusive-scan operation, each process i presents a number, a[i]. -+Once all processes in the MPI job have presented their number, the -+command assigns a[0] to NAME on rank 1, a[0]+a[1] to NAME on rank 2, -+a[0]+a[1]+a[2] to NAME on rank 3, and so forth. No assignment is -+performed on rank 0. The -O option enables "+" to be replaced with -+other operations. -+ -+Exclusive scans can be useful for assigning a unique index to each -+process in the MPI job. -+ -+Exit Status: -+Returns 0 unless an invalid option is given or an error occurs. -+$END -+ -+/* Here is the mpi_exscan builtin. */ -+int -+mpi_exscan_builtin (list) -+ WORD_LIST *list; -+{ -+ return reduction_like (list, "mpi_exscan", MPI_Exscan); -+} -+ -+$BUILTIN mpi_allreduce -+$FUNCTION mpi_allreduce_builtin -+$SHORT_DOC mpi_allreduce number name -+Reduce numbers from all processes in an MPI job to a single number. -+ -+Options: -+ -+ -O OPERATION Operation to perform. Must be one of "max", "min", -+ "sum", "prod", "land", "band", "lor", "bor", "lxor", -+ "bxor", "maxloc", or "minloc" (default: "sum"). -+ -+Arguments: -+ NUMBER Integer to use in the allreduce operation. -+ -+ NAME Array variable in which to receive the result and, in -+ the case of maxloc and minloc, the associated rank. -+ -+In an all-reduce operation, each process i presents a number, a[i]. -+Once all processes in the MPI job have presented their number, the -+command returns a[0]+a[1]+...+a[n-1] to all ranks. The -O option -+enables "+" to be replaced with other operations. -+ -+All-reduces can be useful for reaching global agreement (e.g., of a -+termination condition). -+ -+Exit Status: -+Returns 0 unless an invalid option is given or an error occurs. -+$END -+ -+/* Here is the mpi_allreduce builtin. */ -+int -+mpi_allreduce_builtin (list) -+ WORD_LIST *list; -+{ -+ return reduction_like (list, "mpi_allreduce", MPI_Allreduce); -+} -diff -Naur bash-4.3/config.h.in mpibash-4.3/config.h.in ---- bash-4.3/config.h.in 2013-06-29 15:35:33.000000000 -0600 -+++ mpibash-4.3/config.h.in 2014-05-13 11:27:37.314100671 -0600 -@@ -1147,6 +1147,12 @@ - /* Define if you have the `__argz_stringify' function. */ - #undef HAVE___ARGZ_STRINGIFY - -+/* Define if you have both the <libcircle.h> header file and the libcircle library. */ -+#undef HAVE_LIBCIRCLE -+ -+/* Define if you have the `CIRCLE_cb_reduce_op' function. */ -+#undef HAVE_CIRCLE_CB_REDUCE_OP -+ - /* End additions for lib/intl */ - - #include "config-bot.h" -diff -Naur bash-4.3/configure.ac mpibash-4.3/configure.ac ---- bash-4.3/configure.ac 2014-02-11 08:37:53.000000000 -0700 -+++ mpibash-4.3/configure.ac 2014-05-13 11:27:37.302100179 -0600 -@@ -24,7 +24,7 @@ - AC_REVISION([for Bash 4.3, version 4.063])dnl - - define(bashvers, 4.3) --define(relstatus, release) -+define(relstatus, MPI) - - AC_INIT([bash], bashvers-relstatus, [bug-bash@gnu.org]) - -@@ -813,6 +813,21 @@ - fi - ]) - -+dnl Ensure that we can find an MPI library. -+AC_CHECK_FUNCS([MPI_Init], [], [ -+ AC_MSG_ERROR([Cannot continue without MPI. Consider specifying CC=mpicc.])]) -+ -+dnl If we have Libcircle, use it, too. -+AC_SEARCH_LIBS([CIRCLE_cb_create], [circle], [AC_CHECK_HEADERS([libcircle.h])]) -+if test "x$ac_cv_header_libcircle_h" = xyes; then -+ libcircle_make_prefix="" -+ AC_DEFINE([HAVE_LIBCIRCLE], [1], [Define if you have the Libcircle header and library.]) -+ AC_CHECK_FUNCS([CIRCLE_cb_reduce_op]) -+else -+ libcircle_make_prefix="#" -+fi -+AC_SUBST([CIRCLE], [$libcircle_make_prefix]) -+ - BASH_CHECK_DECL(strtoimax) - BASH_CHECK_DECL(strtol) - BASH_CHECK_DECL(strtoll) -diff -Naur bash-4.3/Makefile.in mpibash-4.3/Makefile.in ---- bash-4.3/Makefile.in 2014-01-25 14:27:30.000000000 -0700 -+++ mpibash-4.3/Makefile.in 2014-05-13 11:27:37.314100671 -0600 -@@ -104,7 +104,7 @@ - VERSPROG = bashversion$(EXEEXT) - VERSOBJ = bashversion.$(OBJEXT) - --Program = bash$(EXEEXT) -+Program = mpibash$(EXEEXT) - Version = @BASHVERS@ - PatchLevel = `$(BUILD_DIR)/$(VERSPROG) -p` - RELSTATUS = @RELSTATUS@ -diff -Naur bash-4.3/shell.c mpibash-4.3/shell.c ---- bash-4.3/shell.c 2014-01-14 06:04:32.000000000 -0700 -+++ mpibash-4.3/shell.c 2014-05-13 11:27:37.314100671 -0600 -@@ -107,6 +107,13 @@ - extern char *primary_prompt, *secondary_prompt; - extern char *this_command_name; - -+extern void initialize_mpi __P((int, char **)); -+extern void finalize_mpi __P((void)); -+#ifdef HAVE_LIBCIRCLE -+extern void initialize_libcircle __P((int, char **)); -+extern void finalize_libcircle __P((void)); -+#endif -+ - /* Non-zero means that this shell has already been run; i.e. you should - call shell_reinitialize () if you need to start afresh. */ - int shell_initialized = 0; -@@ -324,7 +331,7 @@ - static void init_interactive_script __P((void)); - - static void set_shell_name __P((char *)); --static void shell_initialize __P((void)); -+static void shell_initialize __P((int, char **)); - static void shell_reinitialize __P((void)); - - static void show_shell_usage __P((FILE *, int)); -@@ -561,7 +568,7 @@ - - /* From here on in, the shell must be a normal functioning shell. - Variables from the environment are expected to be set, etc. */ -- shell_initialize (); -+ shell_initialize (argc, argv); - - set_default_lang (); - set_default_locale_vars (); -@@ -941,6 +948,12 @@ - end_job_control (); - #endif /* JOB_CONTROL */ - -+#ifdef HAVE_LIBCIRCLE -+ finalize_libcircle (); -+#else -+ finalize_mpi (); -+#endif -+ - /* Always return the exit status of the last command to our parent. */ - sh_exit (s); - } -@@ -1691,7 +1704,9 @@ - /* Do whatever is necessary to initialize the shell. - Put new initializations in here. */ - static void --shell_initialize () -+shell_initialize (argc, argv) -+ int argc; -+ char **argv; - { - char hostname[256]; - -@@ -1760,6 +1775,17 @@ - initialize_shell_options (privileged_mode||running_setuid); - initialize_bashopts (privileged_mode||running_setuid); - #endif -+ -+ /* Initialize Libcircle and MPI. */ -+#ifdef HAVE_LIBCIRCLE -+ initialize_libcircle (argc, argv); -+ initialize_mpi (argc, argv); -+ bind_variable ("libcircle", "yes", 0); -+#else -+ initialize_mpi (argc, argv); -+ bind_variable ("libcircle", "no", 0); -+#endif -+ bind_variable ("mpibash", "yes", 0); - } - - /* Function called by main () when it appears that the shell has already diff --git a/var/spack/packages/mpibash/package.py b/var/spack/packages/mpibash/package.py deleted file mode 100644 index d0f6dafed6..0000000000 --- a/var/spack/packages/mpibash/package.py +++ /dev/null @@ -1,32 +0,0 @@ -import os -from spack import * - -class Mpibash(Package): - """Parallel scripting right from the Bourne-Again Shell (Bash)""" - homepage = "http://www.ccs3.lanl.gov/~pakin/software/mpibash-4.3.html" - - version('4.3', '81348932d5da294953e15d4814c74dd1', - url="http://ftp.gnu.org/gnu/bash/bash-4.3.tar.gz") - - # patch -p1 < ../mpibash-4.3.patch - patch('mpibash-4.3.patch', level=1, when='@4.3') - - # above patch modifies configure.ac - depends_on('autoconf') - - # uses MPI_Exscan which is in MPI-1.2 and later - depends_on('mpi@1.2:') - - depends_on('libcircle') - - def install(self, spec, prefix): - # run autoconf to rebuild configure - autoconf = which('autoconf') - autoconf() - - configure("--prefix=" + prefix, - "CC=mpicc") - - make(parallel=False) - - make("install") diff --git a/var/spack/packages/mpich/package.py b/var/spack/packages/mpich/package.py deleted file mode 100644 index d48bf878f6..0000000000 --- a/var/spack/packages/mpich/package.py +++ /dev/null @@ -1,92 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * -import os - -class Mpich(Package): - """MPICH is a high performance and widely portable implementation of - the Message Passing Interface (MPI) standard.""" - homepage = "http://www.mpich.org" - url = "http://www.mpich.org/static/downloads/3.0.4/mpich-3.0.4.tar.gz" - list_url = "http://www.mpich.org/static/downloads/" - list_depth = 2 - - version('3.1.4', '2ab544607986486562e076b83937bba2') - version('3.1.3', '93cb17f91ac758cbf9174ecb03563778') - version('3.1.2', '7fbf4b81dcb74b07ae85939d1ceee7f1') - version('3.1.1', '40dc408b1e03cc36d80209baaa2d32b7') - version('3.1', '5643dd176499bfb7d25079aaff25f2ec') - version('3.0.4', '9c5d5d4fe1e17dd12153f40bc5b6dbc0') - - provides('mpi@:3.0', when='@3:') - provides('mpi@:1.3', when='@1:') - - def setup_dependent_environment(self, module, spec, dep_spec): - """For dependencies, make mpicc's use spack wrapper.""" - os.environ['MPICH_CC'] = 'cc' - os.environ['MPICH_CXX'] = 'c++' - os.environ['MPICH_F77'] = 'f77' - os.environ['MPICH_F90'] = 'f90' - - - def install(self, spec, prefix): - config_args = ["--prefix=" + prefix, - "--enable-shared"] - - # TODO: Spack should make it so that you can't actually find - # these compilers if they're "disabled" for the current - # compiler configuration. - if not self.compiler.f77: - config_args.append("--disable-f77") - - if not self.compiler.fc: - config_args.append("--disable-fc") - - configure(*config_args) - make() - make("install") - - self.filter_compilers() - - - def filter_compilers(self): - """Run after install to make the MPI compilers use the - compilers that Spack built the package with. - - If this isn't done, they'll have CC, CXX, F77, and FC set - to Spack's generic cc, c++, f77, and f90. We want them to - be bound to whatever compiler they were built with. - """ - bin = self.prefix.bin - mpicc = os.path.join(bin, 'mpicc') - mpicxx = os.path.join(bin, 'mpicxx') - mpif77 = os.path.join(bin, 'mpif77') - mpif90 = os.path.join(bin, 'mpif90') - - kwargs = { 'ignore_absent' : True, 'backup' : False, 'string' : True } - filter_file('CC="cc"', 'CC="%s"' % self.compiler.cc, mpicc, **kwargs) - filter_file('CXX="c++"', 'CXX="%s"' % self.compiler.cxx, mpicxx, **kwargs) - filter_file('F77="f77"', 'F77="%s"' % self.compiler.f77, mpif77, **kwargs) - filter_file('FC="f90"', 'FC="%s"' % self.compiler.fc, mpif90, **kwargs) diff --git a/var/spack/packages/mpileaks/package.py b/var/spack/packages/mpileaks/package.py deleted file mode 100644 index 4ef866588c..0000000000 --- a/var/spack/packages/mpileaks/package.py +++ /dev/null @@ -1,44 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Mpileaks(Package): - """Tool to detect and report leaked MPI objects like MPI_Requests and MPI_Datatypes.""" - - homepage = "https://github.com/hpc/mpileaks" - url = "https://github.com/hpc/mpileaks/releases/download/v1.0/mpileaks-1.0.tar.gz" - - version('1.0', '8838c574b39202a57d7c2d68692718aa') - - depends_on("mpi") - depends_on("adept-utils") - depends_on("callpath") - - def install(self, spec, prefix): - configure("--prefix=" + prefix, - "--with-adept-utils=" + spec['adept-utils'].prefix, - "--with-callpath=" + spec['callpath'].prefix) - make() - make("install") diff --git a/var/spack/packages/mrnet/package.py b/var/spack/packages/mrnet/package.py deleted file mode 100644 index 6e9766f275..0000000000 --- a/var/spack/packages/mrnet/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Mrnet(Package): - """The MRNet Multi-Cast Reduction Network.""" - homepage = "http://paradyn.org/mrnet" - url = "ftp://ftp.cs.wisc.edu/paradyn/mrnet/mrnet_4.0.0.tar.gz" - - version('4.0.0', 'd00301c078cba57ef68613be32ceea2f') - version('4.1.0', '5a248298b395b329e2371bf25366115c') - - parallel = False - - depends_on("boost") - - def install(self, spec, prefix): - configure("--prefix=%s" %prefix, "--enable-shared") - - make() - make("install") - diff --git a/var/spack/packages/munge/package.py b/var/spack/packages/munge/package.py deleted file mode 100644 index c737ca0354..0000000000 --- a/var/spack/packages/munge/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * -import os - -class Munge(Package): - """ MUNGE Uid 'N' Gid Emporium """ - homepage = "https://code.google.com/p/munge/" - url = "https://github.com/dun/munge/releases/download/munge-0.5.11/munge-0.5.11.tar.bz2" - - version('0.5.11', 'bd8fca8d5f4c1fcbef1816482d49ee01', url='https://github.com/dun/munge/releases/download/munge-0.5.11/munge-0.5.11.tar.bz2') - - depends_on('openssl') - depends_on('libgcrypt') - - def install(self, spec, prefix): - os.makedirs(os.path.join(prefix, "lib/systemd/system")) - configure("--prefix=%s" % prefix) - - make() - make("install") - diff --git a/var/spack/packages/muster/package.py b/var/spack/packages/muster/package.py deleted file mode 100644 index 722daf3d7f..0000000000 --- a/var/spack/packages/muster/package.py +++ /dev/null @@ -1,22 +0,0 @@ -from spack import * - -class Muster(Package): - """The Muster library provides implementations of sequential and - parallel K-Medoids clustering algorithms. It is intended as a - general framework for parallel cluster analysis, particularly - for performance data analysis on systems with very large - numbers of processes. - """ - homepage = "https://github.com/scalability-llnl/muster" - url = "https://github.com/scalability-llnl/muster/archive/v1.0.tar.gz" - - version('1.0.1', 'd709787db7e080447afb6571ac17723c') - version('1.0', '2eec6979a4a36d3a65a792d12969be16') - - depends_on("boost") - depends_on("mpi") - - def install(self, spec, prefix): - cmake(".", *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/mvapich2/ad_lustre_rwcontig_open_source.patch b/var/spack/packages/mvapich2/ad_lustre_rwcontig_open_source.patch deleted file mode 100644 index ff85845cf8..0000000000 --- a/var/spack/packages/mvapich2/ad_lustre_rwcontig_open_source.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- a/src/mpi/romio/adio/ad_lustre/ad_lustre_rwcontig.c 2013-12-10 12:05:44.806417000 -0800 -+++ b/src/mpi/romio/adio/ad_lustre/ad_lustre_rwcontig.c 2013-12-10 11:53:03.295622000 -0800 -@@ -8,7 +8,7 @@ - * Copyright (C) 2008 Sun Microsystems, Lustre group - */ - --#define _XOPEN_SOURCE 600 -+//#define _XOPEN_SOURCE 600 - #include <stdlib.h> - #include <malloc.h> - #include "ad_lustre.h" diff --git a/var/spack/packages/mvapich2/package.py b/var/spack/packages/mvapich2/package.py deleted file mode 100644 index ca0b1287c1..0000000000 --- a/var/spack/packages/mvapich2/package.py +++ /dev/null @@ -1,104 +0,0 @@ -import os -from spack import * - -class Mvapich2(Package): - """mvapich2 is an MPI implmenetation for infiniband networks.""" - homepage = "http://mvapich.cse.ohio-state.edu/" - - version('1.9', '5dc58ed08fd3142c260b70fe297e127c', - url="http://mvapich.cse.ohio-state.edu/download/mvapich2/mv2/mvapich2-1.9.tgz") - patch('ad_lustre_rwcontig_open_source.patch', when='@1.9') - - version('2.0', '9fbb68a4111a8b6338e476dc657388b4', - url='http://mvapich.cse.ohio-state.edu/download/mvapich/mv2/mvapich2-2.0.tar.gz') - - provides('mpi@:2.2', when='@1.9') # MVAPICH2-1.9 supports MPI 2.2 - provides('mpi@:3.0', when='@2.0') # MVAPICH2-2.0 supports MPI 3.0 - - - def install(self, spec, prefix): - # we'll set different configure flags depending on our environment - configure_args = [] - - # TODO: The MPICH*_FLAGS have a different name for 1.9 - - if '+debug' in spec: - # set configure flags for debug build - configure_args.append("--disable-fast") - configure_args.append("--enable-g=dbg") - configure_args.append("--enable-error-checking=runtime") - configure_args.append("--enable-error-messages=all") - configure_args.append("--enable-nmpi-as-mpi") - - if "%gnu" in spec: - # set variables for GNU compilers - os.environ['MPICHLIB_CFLAGS'] = "-g -O0" - os.environ['MPICHLIB_CXXFLAGS'] = "-g -O0" - os.environ['MPICHLIB_FFLAGS'] = "-g -O0 -fno-second-underscore" - os.environ['MPICHLIB_F90FLAGS'] = "-g -O0 -fno-second-underscore" - elif "%intel" in spec: - # set variables for Inel compilers - os.environ['MPICHLIB_CFLAGS'] = "-g -O0" - os.environ['MPICHLIB_CXXFLAGS'] = "-g -O0" - os.environ['MPICHLIB_FFLAGS'] = "-g -O0" - os.environ['MPICHLIB_F90FLAGS'] = "-g -O0" - elif "%pgi" in spec: - # set variables for PGI compilers - os.environ['MPICHLIB_CFLAGS'] = "-g -O0 -fPIC" - os.environ['MPICHLIB_CXXFLAGS'] = "-g -O0 -fPIC" - os.environ['MPICHLIB_FFLAGS'] = "-g -O0 -fPIC" - os.environ['MPICHLIB_F90FLAGS'] = "-g -O0 -fPIC" - - else: - # set configure flags for normal optimizations - configure_args.append("--enable-fast=all") - configure_args.append("--enable-g=dbg") - configure_args.append("--enable-nmpi-as-mpi") - - if "%gnu" in spec: - # set variables for what compilers - os.environ['MPICHLIB_CFLAGS'] = "-g -O2" - os.environ['MPICHLIB_CXXFLAGS'] = "-g -O2" - os.environ['MPICHLIB_FFLAGS'] = "-g -O2 -fno-second-underscore" - os.environ['MPICHLIB_F90FLAGS'] = "-g -O2 -fno-second-underscore" - elif "%intel" in spec: - # set variables for Inel compilers - os.environ['MPICHLIB_CFLAGS'] = "-g -O2" - os.environ['MPICHLIB_CXXFLAGS'] = "-g -O2" - os.environ['MPICHLIB_FFLAGS'] = "-g -O2" - os.environ['MPICHLIB_F90FLAGS'] = "-g -O2" - elif "%pgi" in spec: - # set variables for PGI compilers - os.environ['MPICHLIB_CFLAGS'] = "-g -O2 -fPIC" - os.environ['MPICHLIB_CXXFLAGS'] = "-g -O2 -fPIC" - os.environ['MPICHLIB_FFLAGS'] = "-g -O2 -fPIC" - os.environ['MPICHLIB_F90FLAGS'] = "-g -O2 -fPIC" - - # determine network type by variant - if "+psm" in spec: - # throw this flag on QLogic systems to use PSM - configure_args.append("--with-device=ch3:psm") - else: - # throw this flag on IB systems - configure_args.append("--with-device=ch3:mrail", "--with-rdma=gen2") - - # TODO: shared-memory build - - # TODO: CUDA - - # TODO: other file systems like panasis - - configure( - "--prefix=" + prefix, - "--enable-f77", "--enable-fc", "--enable-cxx", - "--enable-shared", "--enable-sharedlibs=gcc", - "--enable-debuginfo", - "--with-pm=no", "--with-pmi=slurm", - "--enable-romio", "--with-file-system=lustre+nfs+ufs", - "--disable-mpe", "--without-mpe", - "--disable-silent-rules", - *configure_args) - - make() - - make("install") diff --git a/var/spack/packages/nasm/package.py b/var/spack/packages/nasm/package.py deleted file mode 100644 index 933b6a62c5..0000000000 --- a/var/spack/packages/nasm/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class Nasm(Package): - """NASM (Netwide Assembler) is an 80x86 assembler designed for - portability and modularity. It includes a disassembler as well.""" - homepage = "http://www.nasm.us" - url = "http://www.nasm.us/pub/nasm/releasebuilds/2.11.06/nasm-2.11.06.tar.xz" - - version('2.11.06', '2b958e9f5d200641e6fc9564977aecc5') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/ncdu/package.py b/var/spack/packages/ncdu/package.py deleted file mode 100644 index 234f9730d6..0000000000 --- a/var/spack/packages/ncdu/package.py +++ /dev/null @@ -1,28 +0,0 @@ -from spack import * - -class Ncdu(Package): - """ - Ncdu is a disk usage analyzer with an ncurses interface. It is designed - to find space hogs on a remote server where you don't have an entire - gaphical setup available, but it is a useful tool even on regular desktop - systems. Ncdu aims to be fast, simple and easy to use, and should be able - to run in any minimal POSIX-like environment with ncurses installed. - """ - - homepage = "http://dev.yorhel.nl/ncdu" - url = "http://dev.yorhel.nl/download/ncdu-1.11.tar.gz" - - version('1.11', '9e44240a5356b029f05f0e70a63c4d12') - version('1.10', '7535decc8d54eca811493e82d4bfab2d') - version('1.9' , '93258079db897d28bb8890e2db89b1fb') - version('1.8' , '94d7a821f8a0d7ba8ef3dd926226f7d5') - version('1.7' , '172047c29d232724cc62e773e82e592a') - - depends_on("ncurses") - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix, - '--with-ncurses=%s' % spec['ncurses']) - - make() - make("install") diff --git a/var/spack/packages/ncurses/package.py b/var/spack/packages/ncurses/package.py deleted file mode 100644 index cc180bbae1..0000000000 --- a/var/spack/packages/ncurses/package.py +++ /dev/null @@ -1,33 +0,0 @@ -from spack import * - -class Ncurses(Package): - """The ncurses (new curses) library is a free software emulation of curses - in System V Release 4.0, and more. It uses terminfo format, supports pads and - color and multiple highlights and forms characters and function-key mapping, - and has all the other SYSV-curses enhancements over BSD curses. - """ - - homepage = "http://invisible-island.net/ncurses/ncurses.html" - - version('5.9', '8cb9c412e5f2d96bc6f459aa8c6282a1', - url='http://ftp.gnu.org/pub/gnu/ncurses/ncurses-5.9.tar.gz') - version('6.0', 'ee13d052e1ead260d7c28071f46eefb1', - url='http://ftp.gnu.org/pub/gnu/ncurses/ncurses-6.0.tar.gz') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--with-shared", - "--enable-widec", - "--disable-pc-files", - "--without-ada") - make() - make("install") - - configure("--prefix=%s" % prefix, - "--with-shared", - "--disable-widec", - "--disable-pc-files", - "--without-ada") - make() - make("install") - diff --git a/var/spack/packages/netcdf/netcdf-4.3.3-mpi.patch b/var/spack/packages/netcdf/netcdf-4.3.3-mpi.patch deleted file mode 100644 index 46dda5fc9d..0000000000 --- a/var/spack/packages/netcdf/netcdf-4.3.3-mpi.patch +++ /dev/null @@ -1,25 +0,0 @@ -diff -Nur netcdf-4.3.3/CMakeLists.txt netcdf-4.3.3.mpi/CMakeLists.txt ---- netcdf-4.3.3/CMakeLists.txt 2015-02-12 16:44:35.000000000 -0500 -+++ netcdf-4.3.3.mpi/CMakeLists.txt 2015-10-14 16:44:41.176300658 -0400 -@@ -753,6 +753,7 @@ - SET(USE_PARALLEL OFF CACHE BOOL "") - MESSAGE(STATUS "Cannot find HDF5 library built with parallel support. Disabling parallel build.") - ELSE() -+ FIND_PACKAGE(MPI REQUIRED) - SET(USE_PARALLEL ON CACHE BOOL "") - SET(STATUS_PARALLEL "ON") - ENDIF() -diff -Nur netcdf-4.3.3/liblib/CMakeLists.txt netcdf-4.3.3.mpi/liblib/CMakeLists.txt ---- netcdf-4.3.3/liblib/CMakeLists.txt 2015-02-12 16:44:35.000000000 -0500 -+++ netcdf-4.3.3.mpi/liblib/CMakeLists.txt 2015-10-14 16:44:57.757793634 -0400 -@@ -71,6 +71,10 @@ - SET(TLL_LIBS ${TLL_LIBS} ${CURL_LIBRARY}) - ENDIF() - -+IF(USE_PARALLEL) -+ SET(TLL_LIBS ${TLL_LIBS} ${MPI_C_LIBRARIES}) -+ENDIF() -+ - IF(USE_HDF4) - SET(TLL_LIBS ${TLL_LIBS} ${HDF4_LIBRARIES}) - ENDIF() diff --git a/var/spack/packages/netcdf/package.py b/var/spack/packages/netcdf/package.py deleted file mode 100644 index e1e0d836c6..0000000000 --- a/var/spack/packages/netcdf/package.py +++ /dev/null @@ -1,27 +0,0 @@ -from spack import * - -class Netcdf(Package): - """NetCDF is a set of software libraries and self-describing, machine-independent - data formats that support the creation, access, and sharing of array-oriented - scientific data.""" - - homepage = "http://www.unidata.ucar.edu/software/netcdf/" - url = "ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4.3.3.tar.gz" - - version('4.3.3', '5fbd0e108a54bd82cb5702a73f56d2ae') - - patch('netcdf-4.3.3-mpi.patch') - - # Dependencies: - # >HDF5 - depends_on("hdf5") - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('..', - "-DCMAKE_INSTALL_PREFIX:PATH=%s" % prefix, - "-DENABLE_DAP:BOOL=OFF", # Disable DAP. - "-DBUILD_SHARED_LIBS:BOOL=OFF") # Don't build shared libraries (use static libs). - - make() - make("install") diff --git a/var/spack/packages/netgauge/package.py b/var/spack/packages/netgauge/package.py deleted file mode 100644 index c2378b0718..0000000000 --- a/var/spack/packages/netgauge/package.py +++ /dev/null @@ -1,43 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Netgauge(Package): - """Netgauge is a high-precision network parameter measurement - tool. It supports benchmarking of many different network protocols - and communication patterns. The main focus lies on accuracy, - statistical analysis and easy extensibility. - """ - homepage = "http://unixer.de/research/netgauge/" - url = "http://unixer.de/research/netgauge/netgauge-2.4.6.tar.gz" - - version('2.4.6', 'e0e040ec6452e93ca21ccc54deac1d7f') - - depends_on("mpi") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/netlib-blas/package.py b/var/spack/packages/netlib-blas/package.py deleted file mode 100644 index 85e97323d3..0000000000 --- a/var/spack/packages/netlib-blas/package.py +++ /dev/null @@ -1,46 +0,0 @@ -from spack import * -import os - - -class NetlibBlas(Package): - """Netlib reference BLAS""" - homepage = "http://www.netlib.org/lapack/" - url = "http://www.netlib.org/lapack/lapack-3.5.0.tgz" - - version('3.5.0', 'b1d3e3e425b2e44a06760ff173104bdf') - - variant('fpic', default=False, description="Build with -fpic compiler option") - - # virtual dependency - provides('blas') - - # Doesn't always build correctly in parallel - parallel = False - - def patch(self): - os.symlink('make.inc.example', 'make.inc') - - mf = FileFilter('make.inc') - mf.filter('^FORTRAN.*', 'FORTRAN = f90') - mf.filter('^LOADER.*', 'LOADER = f90') - mf.filter('^CC =.*', 'CC = cc') - - if '+fpic' in self.spec: - mf.filter('^OPTS.*=.*', 'OPTS = -O2 -frecursive -fpic') - mf.filter('^CFLAGS =.*', 'CFLAGS = -O3 -fpic') - - - def install(self, spec, prefix): - make('blaslib') - - # Tests that blas builds correctly - make('blas_testing') - - # No install provided - mkdirp(prefix.lib) - install('librefblas.a', prefix.lib) - - # Blas virtual package should provide blas.a and libblas.a - with working_dir(prefix.lib): - symlink('librefblas.a', 'blas.a') - symlink('librefblas.a', 'libblas.a') diff --git a/var/spack/packages/netlib-lapack/package.py b/var/spack/packages/netlib-lapack/package.py deleted file mode 100644 index fb6b99e27c..0000000000 --- a/var/spack/packages/netlib-lapack/package.py +++ /dev/null @@ -1,59 +0,0 @@ -from spack import * - -class NetlibLapack(Package): - """ - LAPACK version 3.X is a comprehensive FORTRAN library that does - linear algebra operations including matrix inversions, least - squared solutions to linear sets of equations, eigenvector - analysis, singular value decomposition, etc. It is a very - comprehensive and reputable package that has found extensive - use in the scientific community. - """ - homepage = "http://www.netlib.org/lapack/" - url = "http://www.netlib.org/lapack/lapack-3.5.0.tgz" - - version('3.5.0', 'b1d3e3e425b2e44a06760ff173104bdf') - version('3.4.2', '61bf1a8a4469d4bdb7604f5897179478') - version('3.4.1', '44c3869c38c8335c2b9c2a8bb276eb55') - version('3.4.0', '02d5706ec03ba885fc246e5fa10d8c70') - version('3.3.1', 'd0d533ec9a5b74933c2a1e84eedc58b4') - - variant('shared', default=False, description="Build shared library version") - - # virtual dependency - provides('lapack') - - # blas is a virtual dependency. - depends_on('blas') - - depends_on('cmake') - - # Doesn't always build correctly in parallel - parallel = False - - @when('^netlib-blas') - def get_blas_libs(self): - blas = self.spec['netlib-blas'] - return [join_path(blas.prefix.lib, 'blas.a')] - - - @when('^atlas') - def get_blas_libs(self): - blas = self.spec['atlas'] - return [join_path(blas.prefix.lib, l) - for l in ('libf77blas.a', 'libatlas.a')] - - - def install(self, spec, prefix): - blas_libs = ";".join(self.get_blas_libs()) - cmake_args = [".", '-DBLAS_LIBRARIES=' + blas_libs] - - if '+shared' in spec: - cmake_args.append('-DBUILD_SHARED_LIBS=ON') - - cmake_args += std_cmake_args - - cmake(*cmake_args) - make() - make("install") - diff --git a/var/spack/packages/nettle/package.py b/var/spack/packages/nettle/package.py deleted file mode 100644 index cd600b0b87..0000000000 --- a/var/spack/packages/nettle/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Nettle(Package): - """The Nettle package contains the low-level cryptographic library - that is designed to fit easily in many contexts.""" - - homepage = "http://www.example.com" - url = "http://ftp.gnu.org/gnu/nettle/nettle-2.7.1.tar.gz" - - version('2.7', '2caa1bd667c35db71becb93c5d89737f') - - depends_on('gmp') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/ompss/package.py b/var/spack/packages/ompss/package.py deleted file mode 100644 index e09e0a624f..0000000000 --- a/var/spack/packages/ompss/package.py +++ /dev/null @@ -1,50 +0,0 @@ -from spack import * -import os -import glob - -# working config lines for ompss 14.06 : -#./nanox-0.7/config.log: $ ./configure --prefix=/usr/gapps/exmatex/ompss --with-mcc=/usr/gapps/exmatex/ompss/ --with-hwloc=/usr -#./mcxx-1.99.2/config.log: $ ./configure --prefix=/usr/gapps/exmatex/ompss --with-nanox=/usr/gapps/exmatex/ompss --enable-ompss --with-mpi=/opt/mvapich2-intel-shmem-1.7 --enable-tl-openmp-profile --enable-tl-openmp-intel - -class Ompss(Package): - """OmpSs is an effort to integrate features from the StarSs - programming model developed by BSC into a single programming - model. In particular, our objective is to extend OpenMP with - new directives to support asynchronous parallelism and - heterogeneity (devices like GPUs). However, it can also be - understood as new directives extending other accelerator based - APIs like CUDA or OpenCL. Our OmpSs environment is built on top - of our Mercurium compiler and Nanos++ runtime system.""" - homepage = "http://pm.bsc.es/" - url = "http://pm.bsc.es/sites/default/files/ftp/ompss/releases/ompss-14.10.tar.gz" - list_url = 'http://pm.bsc.es/ompss-downloads' - - version('14.10', '404d161265748f2f96bb35fd8c7e79ee') - - # all dependencies are optional, really - depends_on("mpi") - #depends_on("openmp") - depends_on("hwloc") - depends_on("extrae") - - def install(self, spec, prefix): - if 'openmpi' in spec: - mpi = spec['openmpi'] - elif 'mpich' in spec: - mpi = spec['mpich'] - elif 'mvapich' in spec: - mpi = spec['mvapich'] - - openmp_options = ["--enable-tl-openmp-profile"] - if spec.satisfies('%intel'): - openmp_options.append( "--enable-tl-openmp-intel" ) - - os.chdir(glob.glob('./nanox-*').pop()) - configure("--prefix=%s" % prefix, "--with-mcc=%s" % prefix, "--with-extrae=%s" % spec['extrae'].prefix, "--with-hwloc=%s" % spec['hwloc'].prefix) - make() - make("install") - - os.chdir(glob.glob('../mcxx-*').pop()) - configure("--prefix=%s" % prefix, "--with-nanox=%s" % prefix, "--enable-ompss", "--with-mpi=%s" % mpi.prefix, *openmp_options) - make() - make("install") diff --git a/var/spack/packages/ompt-openmp/package.py b/var/spack/packages/ompt-openmp/package.py deleted file mode 100644 index 5d380ebd77..0000000000 --- a/var/spack/packages/ompt-openmp/package.py +++ /dev/null @@ -1,23 +0,0 @@ -from spack import * - -class OmptOpenmp(Package): - """LLVM/Clang OpenMP runtime with OMPT support. This is a fork of the OpenMPToolsInterface/LLVM-openmp fork of the official LLVM OpenMP mirror. This library provides a drop-in replacement of the OpenMP runtimes for GCC, Intel and LLVM/Clang.""" - homepage = "https://github.com/OpenMPToolsInterface/LLVM-openmp" - url = "http://github.com/khuck/LLVM-openmp/archive/v0.1-spack.tar.gz" - - version('spack', '35227b2726e377faa433fc841226e036') - - # depends_on("foo") - - def install(self, spec, prefix): - with working_dir("runtime/build", create=True): - - # FIXME: Modify the configure line to suit your build system here. - cmake('-DCMAKE_C_COMPILER=%s' % self.compiler.cc, - '-DCMAKE_CXX_COMPILER=%s' % self.compiler.cxx, - '-DCMAKE_INSTALL_PREFIX=%s' % prefix, - '..', *std_cmake_args) - - # FIXME: Add logic to build and install here - make() - make("install") diff --git a/var/spack/packages/opari2/package.py b/var/spack/packages/opari2/package.py deleted file mode 100644 index daaee61e3a..0000000000 --- a/var/spack/packages/opari2/package.py +++ /dev/null @@ -1,65 +0,0 @@ -# FIXME: Add copyright statement here - -from spack import * -from contextlib import closing - -class Opari2(Package): - """OPARI2 is a source-to-source instrumentation tool for OpenMP and - hybrid codes. It surrounds OpenMP directives and runtime library - calls with calls to the POMP2 measurement interface. - OPARI2 will provide you with a new initialization method that allows - for multi-directory and parallel builds as well as the usage of - pre-instrumented libraries. Furthermore, an efficient way of - tracking parent-child relationships was added. Additionally, we - extended OPARI2 to support instrumentation of OpenMP 3.0 - tied tasks. """ - - homepage = "http://www.vi-hps.org/projects/score-p" - url = "http://www.vi-hps.org/upload/packages/opari2/opari2-1.1.2.tar.gz" - - version('1.1.2', '9a262c7ca05ff0ab5f7775ae96f3539e') - - backend_user_provided = """\ -CC=cc -CXX=c++ -F77=f77 -FC=f90 -CFLAGS=-fPIC -CXXFLAGS=-fPIC -""" - frontend_user_provided = """\ -CC_FOR_BUILD=cc -CXX_FOR_BUILD=c++ -F77_FOR_BUILD=f70 -FC_FOR_BUILD=f90 -CFLAGS_FOR_BUILD=-fPIC -CXXFLAGS_FOR_BUILD=-fPIC -""" - mpi_user_provided = """\ -MPICC=mpicc -MPICXX=mpicxx -MPIF77=mpif77 -MPIFC=mpif90 -MPI_CFLAGS=-fPIC -MPI_CXXFLAGS=-fPIC -""" - - def install(self, spec, prefix): - # Use a custom compiler configuration, otherwise the score-p - # build system messes with spack's compiler settings. - # Create these three files in the build directory - with closing(open("platform-backend-user-provided", "w")) as backend_file: - backend_file.write(self.backend_user_provided) - with closing(open("platform-frontend-user-provided", "w")) as frontend_file: - frontend_file.write(self.frontend_user_provided) - with closing(open("platform-mpi-user-provided", "w")) as mpi_file: - mpi_file.write(self.mpi_user_provided) - - # FIXME: Modify the configure line to suit your build system here. - configure("--prefix=%s" % prefix, - "--with-custom-compilers", - "--enable-shared") - - # FIXME: Add logic to build and install here - make() - make("install") diff --git a/var/spack/packages/openmpi/ad_lustre_rwcontig_open_source.patch b/var/spack/packages/openmpi/ad_lustre_rwcontig_open_source.patch deleted file mode 100644 index daa825ccbe..0000000000 --- a/var/spack/packages/openmpi/ad_lustre_rwcontig_open_source.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- a/ompi/mca/io/romio/romio/adio/ad_lustre/ad_lustre_rwcontig.c 2013-12-10 12:05:44.806417000 -0800 -+++ b/ompi/mca/io/romio/romio/adio/ad_lustre/ad_lustre_rwcontig.c 2013-12-10 11:53:03.295622000 -0800 -@@ -8,7 +8,7 @@ - * Copyright (C) 2008 Sun Microsystems, Lustre group - */ - --#define _XOPEN_SOURCE 600 -+//#define _XOPEN_SOURCE 600 - #include <stdlib.h> - #include <malloc.h> - #include "ad_lustre.h" diff --git a/var/spack/packages/openmpi/llnl-platforms.patch b/var/spack/packages/openmpi/llnl-platforms.patch deleted file mode 100644 index f515743c4d..0000000000 --- a/var/spack/packages/openmpi/llnl-platforms.patch +++ /dev/null @@ -1,151 +0,0 @@ -diff -Nuar openmpi-1.6.5.orig/contrib/platform/llnl/optimized openmpi-1.6.5.llnl/contrib/platform/llnl/optimized ---- openmpi-1.6.5.orig/contrib/platform/llnl/optimized 1969-12-31 16:00:00.000000000 -0800 -+++ openmpi-1.6.5.llnl/contrib/platform/llnl/optimized 2013-08-08 23:47:12.704029000 -0700 -@@ -0,0 +1,29 @@ -+enable_dlopen=no -+enable_mem_debug=no -+enable_mem_profile=no -+enable_debug_symbols=no -+enable_binaries=yes -+enable_heterogeneous=no -+enable_debug=no -+enable_shared=yes -+enable_static=yes -+enable_memchecker=no -+enable_ipv6=no -+enable_mpi_f77=yes -+enable_mpi_f90=yes -+enable_mpi_cxx=yes -+enable_mpi_cxx_seek=yes -+enable_cxx_exceptions=no -+enable_ft_thread=no -+enable_per_user_config_files=no -+enable_mca_no_build=carto,crs,filem,routed-linear,snapc,pml-dr,pml-crcp2,pml-crcpw,pml-v,pml-example,crcp,btl-tcp -+enable_contrib_no_build=libnbc,vt -+with_slurm=yes -+with_pmi=yes -+with_tm=no -+with_openib=yes -+with_psm=yes -+with_devel_headers=yes -+with_io_romio_flags=--with-file-system=ufs+nfs+lustre -+with_memory_manager=ptmalloc2 -+with_valgrind=no -diff -Nuar openmpi-1.6.5.orig/contrib/platform/llnl/optimized.conf openmpi-1.6.5.llnl/contrib/platform/llnl/optimized.conf ---- openmpi-1.6.5.orig/contrib/platform/llnl/optimized.conf 1969-12-31 16:00:00.000000000 -0800 -+++ openmpi-1.6.5.llnl/contrib/platform/llnl/optimized.conf 2013-08-08 23:43:52.907553000 -0700 -@@ -0,0 +1,114 @@ -+# -+# Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana -+# University Research and Technology -+# Corporation. All rights reserved. -+# Copyright (c) 2004-2005 The University of Tennessee and The University -+# of Tennessee Research Foundation. All rights -+# reserved. -+# Copyright (c) 2004-2005 High Performance Computing Center Stuttgart, -+# University of Stuttgart. All rights reserved. -+# Copyright (c) 2004-2005 The Regents of the University of California. -+# All rights reserved. -+# Copyright (c) 2006 Cisco Systems, Inc. All rights reserved. -+# Copyright (c) 2011 Los Alamos National Security, LLC. -+# All rights reserved. -+# $COPYRIGHT$ -+# -+# Additional copyrights may follow -+# -+# $HEADER$ -+# -+ -+# This is the default system-wide MCA parameters defaults file. -+# Specifically, the MCA parameter "mca_param_files" defaults to a -+# value of -+# "$HOME/.openmpi/mca-params.conf:$sysconf/openmpi-mca-params.conf" -+# (this file is the latter of the two). So if the default value of -+# mca_param_files is not changed, this file is used to set system-wide -+# MCA parameters. This file can therefore be used to set system-wide -+# default MCA parameters for all users. Of course, users can override -+# these values if they want, but this file is an excellent location -+# for setting system-specific MCA parameters for those users who don't -+# know / care enough to investigate the proper values for them. -+ -+# Note that this file is only applicable where it is visible (in a -+# filesystem sense). Specifically, MPI processes each read this file -+# during their startup to determine what default values for MCA -+# parameters should be used. mpirun does not bundle up the values in -+# this file from the node where it was run and send them to all nodes; -+# the default value decisions are effectively distributed. Hence, -+# these values are only applicable on nodes that "see" this file. If -+# $sysconf is a directory on a local disk, it is likely that changes -+# to this file will need to be propagated to other nodes. If $sysconf -+# is a directory that is shared via a networked filesystem, changes to -+# this file will be visible to all nodes that share this $sysconf. -+ -+# The format is straightforward: one per line, mca_param_name = -+# rvalue. Quoting is ignored (so if you use quotes or escape -+# characters, they'll be included as part of the value). For example: -+ -+# Disable run-time MPI parameter checking -+# mpi_param_check = 0 -+ -+# Note that the value "~/" will be expanded to the current user's home -+# directory. For example: -+ -+# Change component loading path -+# component_path = /usr/local/lib/openmpi:~/my_openmpi_components -+ -+# See "ompi_info --param all all" for a full listing of Open MPI MCA -+# parameters available and their default values. -+# -+ -+# Basic behavior to smooth startup -+mca_component_show_load_errors = 0 -+orte_abort_timeout = 10 -+opal_set_max_sys_limits = 1 -+orte_report_launch_progress = 1 -+ -+# Define timeout for daemons to report back during launch -+orte_startup_timeout = 10000 -+ -+## Protect the shared file systems -+orte_no_session_dirs = /p,/usr/local,/usr/global,/nfs/tmp1,/nfs/tmp2 -+orte_tmpdir_base = /tmp -+ -+## Require an allocation to run - protects the frontend -+## from inadvertent job executions -+orte_allocation_required = 1 -+ -+## MPI behavior -+## Do NOT specify mpi_leave_pinned so system -+## can figure out for itself whether or not -+## it is supported and usable -+orte_notifier = syslog -+ -+## Add the interface for out-of-band communication -+## and set it up -+oob_tcp_if_include=ib0 -+oob_tcp_peer_retries = 1000 -+oob_tcp_disable_family = IPv6 -+oob_tcp_listen_mode = listen_thread -+oob_tcp_sndbuf = 32768 -+oob_tcp_rcvbuf = 32768 -+ -+## Define the MPI interconnects -+btl = sm,openib,self -+ -+## We are using the PSM MTL by default -+## There can only be one! -+pml = cm -+ -+## Setup OpenIB - just in case -+btl_openib_want_fork_support = 0 -+btl_openib_cpc_include = oob -+btl_openib_receive_queues = S,4096,1024:S,12288,512:S,65536,512 -+ -+## Enable cpu affinity -+opal_paffinity_alone = 1 -+ -+## Setup MPI options -+mpi_show_handle_leaks = 0 -+mpi_warn_on_fork = 1 -+mpi_abort_print_stack = 0 -+ diff --git a/var/spack/packages/openmpi/package.py b/var/spack/packages/openmpi/package.py deleted file mode 100644 index 5e429dedf5..0000000000 --- a/var/spack/packages/openmpi/package.py +++ /dev/null @@ -1,109 +0,0 @@ -import os - -from spack import * - - -class Openmpi(Package): - """Open MPI is a project combining technologies and resources from - several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) - in order to build the best MPI library available. A completely - new MPI-2 compliant implementation, Open MPI offers advantages - for system and software vendors, application developers and - computer science researchers. - """ - - homepage = "http://www.open-mpi.org" - - version('1.10.0', '280cf952de68369cebaca886c5ce0304', - url = "http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.0.tar.bz2") - version('1.8.8', '0dab8e602372da1425e9242ae37faf8c', - url = 'http://www.open-mpi.org/software/ompi/v1.8/downloads/openmpi-1.8.8.tar.bz2') - version('1.6.5', '03aed2a4aa4d0b27196962a2a65fc475', - url = "http://www.open-mpi.org/software/ompi/v1.6/downloads/openmpi-1.6.5.tar.bz2") - - patch('ad_lustre_rwcontig_open_source.patch', when="@1.6.5") - patch('llnl-platforms.patch', when="@1.6.5") - - provides('mpi@:2.2', when='@1.6.5') # Open MPI 1.6.5 supports MPI-2.2 - provides('mpi@:3.0', when='@1.8.8') # Open MPI 1.8.8 supports MPI-3.0 - provides('mpi@:3.0', when='@1.10.0') # Open MPI 1.10.0 supports MPI-3.0 - - - def setup_dependent_environment(self, module, spec, dep_spec): - """For dependencies, make mpicc's use spack wrapper.""" - os.environ['OMPI_CC'] = 'cc' - os.environ['OMPI_CXX'] = 'c++' - os.environ['OMPI_FC'] = 'f90' - os.environ['OMPI_F77'] = 'f77' - - - def install(self, spec, prefix): - config_args = ["--prefix=%s" % prefix] - - # TODO: use variants for this, e.g. +lanl, +llnl, etc. - # use this for LANL builds, but for LLNL builds, we need: - # "--with-platform=contrib/platform/llnl/optimized" - if self.version == ver("1.6.5") and '+lanl' in spec: - config_args.append("--with-platform=contrib/platform/lanl/tlcc2/optimized-nopanasas") - - # TODO: Spack should make it so that you can't actually find - # these compilers if they're "disabled" for the current - # compiler configuration. - if not self.compiler.f77 and not self.compiler.fc: - config_args.append("--enable-mpi-fortran=no") - - configure(*config_args) - make() - make("install") - - self.filter_compilers() - - - def filter_compilers(self): - """Run after install to make the MPI compilers use the - compilers that Spack built the package with. - - If this isn't done, they'll have CC, CXX and FC set - to Spack's generic cc, c++ and f90. We want them to - be bound to whatever compiler they were built with. - """ - kwargs = { 'ignore_absent' : True, 'backup' : False, 'string' : False } - dir = os.path.join(self.prefix, 'share/openmpi/') - - cc_wrappers = ['mpicc-vt-wrapper-data.txt', 'mpicc-wrapper-data.txt', - 'ortecc-wrapper-data.txt', 'shmemcc-wrapper-data.txt'] - - cxx_wrappers = ['mpic++-vt-wrapper-data.txt', 'mpic++-wrapper-data.txt', - 'ortec++-wrapper-data.txt'] - - fc_wrappers = ['mpifort-vt-wrapper-data.txt', - 'mpifort-wrapper-data.txt', 'shmemfort-wrapper-data.txt'] - - for wrapper in cc_wrappers: - filter_file('compiler=.*', 'compiler=%s' % self.compiler.cc, - os.path.join(dir, wrapper), **kwargs) - - for wrapper in cxx_wrappers: - filter_file('compiler=.*', 'compiler=%s' % self.compiler.cxx, - os.path.join(dir, wrapper), **kwargs) - - for wrapper in fc_wrappers: - filter_file('compiler=.*', 'compiler=%s' % self.compiler.fc, - os.path.join(dir, wrapper), **kwargs) - - # These are symlinks in newer versions, so check that here - f77_wrappers = ['mpif77-vt-wrapper-data.txt', 'mpif77-wrapper-data.txt'] - f90_wrappers = ['mpif90-vt-wrapper-data.txt', 'mpif90-wrapper-data.txt'] - - for wrapper in f77_wrappers: - path = os.path.join(dir, wrapper) - if not os.path.islink(path): - filter_file('compiler=.*', 'compiler=%s' % self.compiler.f77, - path, **kwargs) - for wrapper in f90_wrappers: - path = os.path.join(dir, wrapper) - if not os.path.islink(path): - filter_file('compiler=.*', 'compiler=%s' % self.compiler.fc, - path, **kwargs) - - diff --git a/var/spack/packages/openssl/package.py b/var/spack/packages/openssl/package.py deleted file mode 100644 index c5a8aeb9dc..0000000000 --- a/var/spack/packages/openssl/package.py +++ /dev/null @@ -1,26 +0,0 @@ -from spack import * - -class Openssl(Package): - """The OpenSSL Project is a collaborative effort to develop a - robust, commercial-grade, full-featured, and Open Source - toolkit implementing the Secure Sockets Layer (SSL v2/v3) and - Transport Layer Security (TLS v1) protocols as well as a - full-strength general purpose cryptography library.""" - homepage = "http://www.openssl.org" - url = "http://www.openssl.org/source/openssl-1.0.1h.tar.gz" - - version('1.0.1h', '8d6d684a9430d5cc98a62a5d8fbda8cf') - - depends_on("zlib") - parallel = False - - def install(self, spec, prefix): - config = Executable("./config") - config("--prefix=%s" % prefix, - "--openssldir=%s/etc/openssl" % prefix, - "zlib", - "no-krb5", - "shared") - - make() - make("install") diff --git a/var/spack/packages/otf/package.py b/var/spack/packages/otf/package.py deleted file mode 100644 index 52893dd265..0000000000 --- a/var/spack/packages/otf/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * - -class Otf(Package): - """To improve scalability for very large and massively parallel - traces the Open Trace Format (OTF) is developed at ZIH as a - successor format to the Vampir Trace Format (VTF3).""" - - homepage = "http://tu-dresden.de/die_tu_dresden/zentrale_einrichtungen/zih/forschung/projekte/otf/index_html/document_view?set_language=en" - url = "http://wwwpub.zih.tu-dresden.de/%7Emlieber/dcount/dcount.php?package=otf&get=OTF-1.12.5salmon.tar.gz" - - version('1.12.5salmon', 'bf260198633277031330e3356dcb4eec') - - depends_on('zlib') - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix, - '--without-vtf3', - '--with-zlib', - '--with-zlibsymbols') - make() - make("install") diff --git a/var/spack/packages/otf2/package.py b/var/spack/packages/otf2/package.py deleted file mode 100644 index fa0a5898b6..0000000000 --- a/var/spack/packages/otf2/package.py +++ /dev/null @@ -1,74 +0,0 @@ -# FIXME: Add copyright - -from spack import * -from contextlib import closing -import os - -class Otf2(Package): - """The Open Trace Format 2 is a highly scalable, memory efficient event - trace data format plus support library.""" - - homepage = "http://www.vi-hps.org/score-p" - url = "http://www.vi-hps.org/upload/packages/otf2/otf2-1.4.tar.gz" - - version('1.4', 'a23c42e936eb9209c4e08b61c3cf5092', - url="http://www.vi-hps.org/upload/packages/otf2/otf2-1.4.tar.gz") - version('1.3.1', 'd0ffc4e858455ace4f596f910e68c9f2', - url="http://www.vi-hps.org/upload/packages/otf2/otf2-1.3.1.tar.gz") - version('1.2.1', '8fb3e11fb7489896596ae2c7c83d7fc8', - url="http://www.vi-hps.org/upload/packages/otf2/otf2-1.2.1.tar.gz") - - backend_user_provided = """\ -CC=cc -CXX=c++ -F77=f77 -FC=f90 -CFLAGS=-fPIC -CXXFLAGS=-fPIC -""" - frontend_user_provided = """\ -CC_FOR_BUILD=cc -CXX_FOR_BUILD=c++ -F77_FOR_BUILD=f70 -FC_FOR_BUILD=f90 -CFLAGS_FOR_BUILD=-fPIC -CXXFLAGS_FOR_BUILD=-fPIC -""" - mpi_user_provided = """\ -MPICC=cc -MPICXX=c++ -MPIF77=f77 -MPIFC=f90 -MPI_CFLAGS=-fPIC -MPI_CXXFLAGS=-fPIC -""" - - @when('@:1.2.1') - def version_specific_args(self): - return ["--with-platform=disabled", "CC=cc", "CXX=c++", "F77=f77", "F90=f90", "CFLAGS=-fPIC", "CXXFLAGS=-fPIC"] - - @when('@1.3:') - def version_specific_args(self): - # TODO: figure out what scorep's build does as of otf2 1.3 - return ["--with-custom-compilers"] - - def install(self, spec, prefix): - # Use a custom compiler configuration, otherwise the score-p - # build system messes with spack's compiler settings. - # Create these three files in the build directory - with closing(open("platform-backend-user-provided", "w")) as backend_file: - backend_file.write(self.backend_user_provided) - with closing(open("platform-frontend-user-provided", "w")) as frontend_file: - frontend_file.write(self.frontend_user_provided) - with closing(open("platform-mpi-user-provided", "w")) as mpi_file: - mpi_file.write(self.mpi_user_provided) - - configure_args=["--prefix=%s" % prefix, - "--enable-shared"] - - configure_args.extend(self.version_specific_args()) - - configure(*configure_args) - - make() - make("install") diff --git a/var/spack/packages/pango/package.py b/var/spack/packages/pango/package.py deleted file mode 100644 index df43625bf5..0000000000 --- a/var/spack/packages/pango/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Pango(Package): - """Pango is a library for laying out and rendering of text, with - an emphasis on internationalization. It can be used anywhere - that text layout is needed, though most of the work on Pango so - far has been done in the context of the GTK+ widget toolkit.""" - homepage = "http://www.pango.org" - url = "http://ftp.gnome.org/pub/gnome/sources/pango/1.36/pango-1.36.8.tar.xz" - - version('1.36.8', '217a9a753006275215fa9fa127760ece') - - depends_on("harfbuzz") - depends_on("cairo") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/papi/package.py b/var/spack/packages/papi/package.py deleted file mode 100644 index 596f7114d6..0000000000 --- a/var/spack/packages/papi/package.py +++ /dev/null @@ -1,35 +0,0 @@ -from spack import * -import os - -class Papi(Package): - """PAPI provides the tool designer and application engineer with a - consistent interface and methodology for use of the performance - counter hardware found in most major microprocessors. PAPI - enables software engineers to see, in near real time, the - relation between software performance and processor events. In - addition Component PAPI provides access to a collection of - components that expose performance measurement opportunites - across the hardware and software stack.""" - homepage = "http://icl.cs.utk.edu/papi/index.html" - url = "http://icl.cs.utk.edu/projects/papi/downloads/papi-5.3.0.tar.gz" - - version('5.3.0', '367961dd0ab426e5ae367c2713924ffb') - - def install(self, spec, prefix): - os.chdir("src/") - - configure_args=["--prefix=%s" % prefix] - - # need to force consistency in the use of compilers - if spec.satisfies('%gcc'): - configure_args.append('CC=gcc') - configure_args.append('MPICH_CC=gcc') - if spec.satisfies('%intel'): - configure_args.append('CC=icc') - configure_args.append('MPICH_CC=icc') - - configure(*configure_args) - - make() - make("install") - diff --git a/var/spack/packages/paraver/package.py b/var/spack/packages/paraver/package.py deleted file mode 100644 index 5f8a153d4c..0000000000 --- a/var/spack/packages/paraver/package.py +++ /dev/null @@ -1,41 +0,0 @@ -from spack import * -import os - -class Paraver(Package): - """"A very powerful performance visualization and analysis tool - based on traces that can be used to analyse any information that - is expressed on its input trace format. Traces for parallel MPI, - OpenMP and other programs can be genereated with Extrae.""" - homepage = "http://www.bsc.es/computer-sciences/performance-tools/paraver" - url = "http://www.bsc.es/ssl/apps/performanceTools/files/paraver-sources-4.5.3.tar.gz" - - version('4.5.3', '625de9ec0d639acd18d1aaa644b38f72') - - depends_on("boost") - #depends_on("extrae") - depends_on("wx") - depends_on("wxpropgrid") - - def install(self, spec, prefix): - os.chdir("ptools_common_files") - configure("--prefix=%s" % prefix) - make() - make("install") - - os.chdir("../paraver-kernel") - #"--with-extrae=%s" % spec['extrae'].prefix, - configure("--prefix=%s" % prefix, "--with-ptools-common-files=%s" % prefix, "--with-boost=%s" % spec['boost'].prefix, "--with-boost-serialization=boost_serialization") - make() - make("install") - - os.chdir("../paraver-toolset") - configure("--prefix=%s" % prefix) - make() - make("install") - - os.chdir("../wxparaver") - #"--with-extrae=%s" % spec['extrae'].prefix, - configure("--prefix=%s" % prefix, "--with-paraver=%s" % prefix, "--with-boost=%s" % spec['boost'].prefix, "--with-boost-serialization=boost_serialization", "--with-wxdir=%s" % spec['wx'].prefix.bin) - make() - make("install") - diff --git a/var/spack/packages/paraview/package.py b/var/spack/packages/paraview/package.py deleted file mode 100644 index a0ff812ca2..0000000000 --- a/var/spack/packages/paraview/package.py +++ /dev/null @@ -1,72 +0,0 @@ -from spack import * - -class Paraview(Package): - homepage = 'http://www.paraview.org' - url = 'http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz' - - version('4.4.0', 'fa1569857dd680ebb4d7ff89c2227378', url='http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz') - - variant('python', default=False, description='Enable Python support') - variant('matplotlib', default=False, description='Enable Matplotlib support') - variant('numpy', default=False, description='Enable NumPy support') - - variant('tcl', default=False, description='Enable TCL support') - - variant('mpi', default=False, description='Enable MPI support') - - variant('osmesa', default=False, description='Enable OSMesa support') - variant('qt', default=False, description='Enable Qt support') - - depends_on('python', when='+python') - depends_on('py-numpy', when='+python+numpy') - depends_on('py-matplotlib', when='+python+matplotlib') - depends_on('tcl', when='+tcl') - depends_on('mpi', when='+mpi') - depends_on('qt', when='+qt') - - depends_on('bzip2') - depends_on('freetype') - depends_on('hdf5') # drags in mpi - depends_on('jpeg') - depends_on('libpng') - depends_on('libtiff') - #depends_on('libxml2') # drags in python - depends_on('netcdf') - #depends_on('protobuf') # version mismatches? - #depends_on('sqlite') # external version not supported - depends_on('zlib') - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - def feature_to_bool(feature, on='ON', off='OFF'): - if feature in spec: - return on - return off - - def nfeature_to_bool(feature): - return feature_to_bool(feature, on='OFF', off='ON') - - feature_args = std_cmake_args[:] - feature_args.append('-DPARAVIEW_BUILD_QT_GUI:BOOL=%s' % feature_to_bool('+qt')) - feature_args.append('-DPARAVIEW_ENABLE_PYTHON:BOOL=%s' % feature_to_bool('+python')) - feature_args.append('-DPARAVIEW_USE_MPI:BOOL=%s' % feature_to_bool('+mpi')) - feature_args.append('-DVTK_ENABLE_TCL_WRAPPING:BOOL=%s' % feature_to_bool('+tcl')) - feature_args.append('-DVTK_OPENGL_HAS_OSMESA:BOOL=%s' % feature_to_bool('+osmesa')) - feature_args.append('-DVTK_USE_X:BOOL=%s' % nfeature_to_bool('+osmesa')) - feature_args.append('-DVTK_RENDERING_BACKEND:STRING=%s' % feature_to_bool('+opengl2', 'OpenGL2', 'OpenGL')) - - feature_args.extend(std_cmake_args) - - cmake('..', - '-DCMAKE_INSTALL_PREFIX:PATH=%s' % prefix, - '-DBUILD_TESTING:BOOL=OFF', - '-DVTK_USER_SYSTEM_FREETYPE:BOOL=ON', - '-DVTK_USER_SYSTEM_HDF5:BOOL=ON', - '-DVTK_USER_SYSTEM_JPEG:BOOL=ON', - #'-DVTK_USER_SYSTEM_LIBXML2:BOOL=ON', - '-DVTK_USER_SYSTEM_NETCDF:BOOL=ON', - '-DVTK_USER_SYSTEM_TIFF:BOOL=ON', - '-DVTK_USER_SYSTEM_ZLIB:BOOL=ON', - *feature_args) - make() - make('install') diff --git a/var/spack/packages/parmetis/package.py b/var/spack/packages/parmetis/package.py deleted file mode 100644 index d8cd337304..0000000000 --- a/var/spack/packages/parmetis/package.py +++ /dev/null @@ -1,26 +0,0 @@ -from spack import * - -class Parmetis(Package): - """ParMETIS is an MPI-based parallel library that implements a - variety of algorithms for partitioning unstructured graphs, - meshes, and for computing fill-reducing orderings of sparse - matrices.""" - homepage = "http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview" - url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/parmetis-4.0.3.tar.gz" - - version('4.0.3', 'f69c479586bf6bb7aff6a9bc0c739628') - - depends_on('mpi') - - def install(self, spec, prefix): - cmake(".", - '-DGKLIB_PATH=%s/metis/GKlib' % pwd(), - '-DMETIS_PATH=%s/metis' % pwd(), - '-DSHARED=1', - '-DCMAKE_C_COMPILER=mpicc', - '-DCMAKE_CXX_COMPILER=mpicxx', - '-DSHARED=1', - *std_cmake_args) - - make() - make("install") diff --git a/var/spack/packages/parpack/package.py b/var/spack/packages/parpack/package.py deleted file mode 100644 index 622aceca04..0000000000 --- a/var/spack/packages/parpack/package.py +++ /dev/null @@ -1,43 +0,0 @@ -from spack import * -import os -import shutil - -class Parpack(Package): - """ARPACK is a collection of Fortran77 subroutines designed to solve large - scale eigenvalue problems.""" - - homepage = "http://www.caam.rice.edu/software/ARPACK/download.html" - url = "http://www.caam.rice.edu/software/ARPACK/SRC/parpack96.tar.Z" - - version('96', 'a175f70ff71837a33ff7e4b0b6054f43') - - depends_on('mpi') - depends_on('blas') - depends_on('lapack') - - def patch(self): - # Filter the CJ makefile to make a spack one. - shutil.move('ARMAKES/ARmake.CJ', 'ARmake.inc') - mf = FileFilter('ARmake.inc') - - # Be sure to use Spack F77 wrapper - mf.filter('^FC.*', 'FC = f77') - mf.filter('^FFLAGS.*', 'FFLAGS = -O2 -g') - - # Set up some variables. - mf.filter('^PLAT.*', 'PLAT = ') - mf.filter('^home.*', 'home = %s' % os.getcwd()) - mf.filter('^BLASdir.*', 'BLASdir = %s' % self.spec['blas'].prefix) - mf.filter('^LAPACKdir.*', 'LAPACKdir = %s' % self.spec['lapack'].prefix) - mf.filter('^MAKE.*', 'MAKE = make') - - # build the library in our own prefix. - mf.filter('^ARPACKLIB.*', 'PARPACKLIB = %s/libparpack.a' % os.getcwd()) - - - def install(self, spec, prefix): - with working_dir('PARPACK/SRC/MPI'): - make('all') - - mkdirp(prefix.lib) - install('libparpack.a', prefix.lib) diff --git a/var/spack/packages/pcre/package.py b/var/spack/packages/pcre/package.py deleted file mode 100644 index 3424048a6c..0000000000 --- a/var/spack/packages/pcre/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class Pcre(Package): - """The PCRE package contains Perl Compatible Regular Expression - libraries. These are useful for implementing regular expression - pattern matching using the same syntax and semantics as Perl 5.""" - homepage = "http://www.pcre.org""" - url = "ftp://ftp.csx.cam.ac.uk/pub/software/programming/pcre/pcre-8.36.tar.bz2" - - version('8.36', 'b767bc9af0c20bc9c1fe403b0d41ad97') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/petsc/package.py b/var/spack/packages/petsc/package.py deleted file mode 100644 index 4864e39bf1..0000000000 --- a/var/spack/packages/petsc/package.py +++ /dev/null @@ -1,40 +0,0 @@ -from spack import * - -class Petsc(Package): - """PETSc is a suite of data structures and routines for the - scalable (parallel) solution of scientific applications modeled by - partial differential equations.""" - - homepage = "http://www.mcs.anl.gov/petsc/index.html" - url = "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.5.3.tar.gz" - - version('3.5.3', 'd4fd2734661e89f18ac6014b5dd1ef2f') - version('3.5.2', 'ad170802b3b058b5deb9cd1f968e7e13') - version('3.5.1', 'a557e029711ebf425544e117ffa44d8f') - - depends_on("boost") - depends_on("blas") - depends_on("lapack") - depends_on("hypre") - depends_on("parmetis") - depends_on("metis") - depends_on("hdf5") - depends_on("mpi") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "CC=cc", - "CXX=c++", - "FC=f90", - "--with-blas-lib=%s/libblas.a" % spec['blas'].prefix.lib, - "--with-lapack-lib=%s/liblapack.a" % spec['lapack'].prefix.lib, - "--with-boost-dir=%s" % spec['boost'].prefix, - "--with-hypre-dir=%s" % spec['hypre'].prefix, - "--with-parmetis-dir=%s" % spec['parmetis'].prefix, - "--with-metis-dir=%s" % spec['metis'].prefix, - "--with-hdf5-dir=%s" % spec['hdf5'].prefix, - "--with-shared-libraries=0") - - # PETSc has its own way of doing parallel make. - make('MAKE_NP=%s' % make_jobs, parallel=False) - make("install") diff --git a/var/spack/packages/pidx/package.py b/var/spack/packages/pidx/package.py deleted file mode 100644 index 81aed62fb1..0000000000 --- a/var/spack/packages/pidx/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * - -class Pidx(Package): - """PIDX Parallel I/O Library. - - PIDX is an efficient parallel I/O library that reads and writes - multiresolution IDX data files. - """ - - homepage = "http://www.cedmav.com/pidx" - - version('1.0', git='https://github.com/sci-visus/PIDX.git', - commit='6afa1cf71d1c41263296dc049c8fabaf73c296da') - - depends_on("mpi") - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('..', *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/pixman/package.py b/var/spack/packages/pixman/package.py deleted file mode 100644 index 895cbdbca5..0000000000 --- a/var/spack/packages/pixman/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Pixman(Package): - """The Pixman package contains a library that provides low-level - pixel manipulation features such as image compositing and - trapezoid rasterization.""" - homepage = "http://www.pixman.org" - url = "http://cairographics.org/releases/pixman-0.32.6.tar.gz" - - version('0.32.6', '3a30859719a41bd0f5cccffbfefdd4c2') - - depends_on("libpng") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--disable-gtk") - make() - make("install") diff --git a/var/spack/packages/pkg-config/package.py b/var/spack/packages/pkg-config/package.py deleted file mode 100644 index 9964c6ce34..0000000000 --- a/var/spack/packages/pkg-config/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class PkgConfig(Package): - """pkg-config is a helper tool used when compiling applications and libraries""" - homepage = "http://www.freedesktop.org/wiki/Software/pkg-config/" - url = "http://pkgconfig.freedesktop.org/releases/pkg-config-0.28.tar.gz" - - version('0.28', 'aa3c86e67551adc3ac865160e34a2a0d') - - parallel = False - - def install(self, spec, prefix): - configure("--prefix=%s" %prefix, "--enable-shared") - - make() - make("install") - diff --git a/var/spack/packages/pmgr_collective/package.py b/var/spack/packages/pmgr_collective/package.py deleted file mode 100644 index 5d9b02acc3..0000000000 --- a/var/spack/packages/pmgr_collective/package.py +++ /dev/null @@ -1,37 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class PmgrCollective(Package): - """PMGR_COLLECTIVE provides a scalable network for bootstrapping - MPI jobs.""" - homepage = "http://www.sourceforge.net/projects/pmgrcollective" - url = "http://downloads.sourceforge.net/project/pmgrcollective/pmgrcollective/PMGR_COLLECTIVE-1.0/pmgr_collective-1.0.tgz" - - version('1.0', '0384d008774274cc3fc7b4d810dfd07e') - - def install(self, spec, prefix): - make('PREFIX="' + prefix + '"') - make('PREFIX="' + prefix + '"', "install") diff --git a/var/spack/packages/postgresql/package.py b/var/spack/packages/postgresql/package.py deleted file mode 100644 index 46922b7b71..0000000000 --- a/var/spack/packages/postgresql/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Postgresql(Package): - """PostgreSQL is a powerful, open source object-relational - database system. It has more than 15 years of active - development and a proven architecture that has earned it a - strong reputation for reliability, data integrity, and - correctness.""" - homepage = "http://www.postgresql.org/" - url = "http://ftp.postgresql.org/pub/source/v9.3.4/postgresql-9.3.4.tar.bz2" - - version('9.3.4', 'd0a41f54c377b2d2fab4a003b0dac762') - - depends_on("openssl") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--with-openssl") - make() - make("install") diff --git a/var/spack/packages/ppl/package.py b/var/spack/packages/ppl/package.py deleted file mode 100644 index 018d5c523d..0000000000 --- a/var/spack/packages/ppl/package.py +++ /dev/null @@ -1,28 +0,0 @@ -from spack import * - -class Ppl(Package): - """The Parma Polyhedra Library (PPL) provides numerical - abstractions especially targeted at applications in the field of - analysis and verification of complex systems. These abstractions - include convex polyhedra, some special classes of polyhedra shapes - that offer interesting complexity/precision tradeoffs, and grids - which represent regularly spaced points that satisfy a set of - linear congruence relations. The library also supports finite - powersets and products of polyhedra and grids, a mixed integer - linear programming problem solver using an exact-arithmetic - version of the simplex algorithm, a parametric integer programming - solver, and primitives for termination analysis via the automatic - synthesis of linear ranking functions.""" - - homepage = "http://bugseng.com/products/ppl/" - url = "http://bugseng.com/products/ppl/download/ftp/releases/1.1/ppl-1.1.tar.gz" - - version('1.1', '4f2422c0ef3f409707af32108deb30a7') - - depends_on("gmp") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--with-gmp=%s" % spec['gmp'].prefix) - make() - make("install") diff --git a/var/spack/packages/protobuf/package.py b/var/spack/packages/protobuf/package.py deleted file mode 100644 index 34085c7ce9..0000000000 --- a/var/spack/packages/protobuf/package.py +++ /dev/null @@ -1,16 +0,0 @@ -import os -from spack import * - -class Protobuf(Package): - """Google's data interchange format.""" - - homepage = "https://developers.google.com/protocol-buffers" - url = "https://github.com/google/protobuf/releases/download/v2.5.0/protobuf-2.5.0.tar.bz2" - - version('2.5.0', 'a72001a9067a4c2c4e0e836d0f92ece4') - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("check") - make("install") diff --git a/var/spack/packages/py-basemap/package.py b/var/spack/packages/py-basemap/package.py deleted file mode 100644 index 45f1085ba1..0000000000 --- a/var/spack/packages/py-basemap/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * -import os - -class PyBasemap(Package): - """The matplotlib basemap toolkit is a library for plotting 2D data on maps in Python.""" - homepage = "http://matplotlib.org/basemap/" - url = "https://downloads.sourceforge.net/project/matplotlib/matplotlib-toolkits/basemap-1.0.7/basemap-1.0.7.tar.gz" - - version('1.0.7', '48c0557ced9e2c6e440b28b3caff2de8') - - extends('python') - depends_on('py-setuptools') - depends_on('py-numpy') - depends_on('py-matplotlib') - depends_on('py-pil') - depends_on("geos") - - def install(self, spec, prefix): - env['GEOS_DIR'] = spec['geos'].prefix - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-biopython/package.py b/var/spack/packages/py-biopython/package.py deleted file mode 100644 index 8ecaf48626..0000000000 --- a/var/spack/packages/py-biopython/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class PyBiopython(Package): - """It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics.""" - homepage = "http://biopython.org/wiki/Main_Page" - url = "http://biopython.org/DIST/biopython-1.65.tar.gz" - - version('1.65', '143e7861ade85c0a8b5e2bbdd1da1f67') - - extends('python') - depends_on('py-mx') - depends_on('py-numpy') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-cffi/package.py b/var/spack/packages/py-cffi/package.py deleted file mode 100644 index a4d37483fe..0000000000 --- a/var/spack/packages/py-cffi/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class PyCffi(Package): - """Foreign Function Interface for Python calling C code""" - homepage = "http://cffi.readthedocs.org/en/latest/" - # base https://pypi.python.org/pypi/cffi - url = "https://pypi.python.org/packages/source/c/cffi/cffi-1.1.2.tar.gz#md5=" - - version('1.1.2', 'ca6e6c45b45caa87aee9adc7c796eaea') - - extends('python') - depends_on('py-setuptools') - depends_on('py-pycparser') - depends_on('libffi') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-cython/package.py b/var/spack/packages/py-cython/package.py deleted file mode 100644 index 68eb735ad9..0000000000 --- a/var/spack/packages/py-cython/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PyCython(Package): - """The Cython compiler for writing C extensions for the Python language.""" - homepage = "https://pypi.python.org/pypi/cython" - url = "https://pypi.python.org/packages/source/C/Cython/cython-0.22.tar.gz" - - version('0.21.2', 'd21adb870c75680dc857cd05d41046a4') - version('0.22', '1ae25add4ef7b63ee9b4af697300d6b6') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-dateutil/package.py b/var/spack/packages/py-dateutil/package.py deleted file mode 100644 index 0a17f2f2d2..0000000000 --- a/var/spack/packages/py-dateutil/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class PyDateutil(Package): - """Extensions to the standard Python datetime module.""" - homepage = "https://pypi.python.org/pypi/dateutil" - url = "https://pypi.python.org/packages/source/p/python-dateutil/python-dateutil-2.4.0.tar.gz" - - version('2.4.0', '75714163bb96bedd07685cdb2071b8bc') - version('2.4.2', '4ef68e1c485b09e9f034e10473e5add2') - - extends('python') - depends_on('py-setuptools') - depends_on('py-six') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-epydoc/package.py b/var/spack/packages/py-epydoc/package.py deleted file mode 100644 index af05510504..0000000000 --- a/var/spack/packages/py-epydoc/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PyEpydoc(Package): - """Epydoc is a tool for generating API documentation documentation for Python modules, based on their docstrings.""" - homepage = "https://pypi.python.org/pypi/epydoc" - url = "https://pypi.python.org/packages/source/e/epydoc/epydoc-3.0.1.tar.gz" - - version('3.0.1', '36407974bd5da2af00bf90ca27feeb44') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-genders/package.py b/var/spack/packages/py-genders/package.py deleted file mode 100644 index c49c8fd5b2..0000000000 --- a/var/spack/packages/py-genders/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class PyGenders(Package): - """Genders is a static cluster configuration database used for cluster configuration management. It is used by a variety of tools and scripts for management of large clusters.""" - homepage = "https://github.com/chaos/genders" - url = "https://github.com/chaos/genders/releases/download/genders-1-22-1/genders-1.22.tar.gz" - - version('1.22', '9ea59a024dcbddb85b0ed25ddca9bc8e', url='https://github.com/chaos/genders/releases/download/genders-1-22-1/genders-1.22.tar.gz') - extends('python') - - def install(self, spec, prefix): - configure("--prefix=%s" %prefix) - make(parallel=False) - make("install") - diff --git a/var/spack/packages/py-gnuplot/package.py b/var/spack/packages/py-gnuplot/package.py deleted file mode 100644 index ede4472c03..0000000000 --- a/var/spack/packages/py-gnuplot/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PyGnuplot(Package): - """Gnuplot.py is a Python package that allows you to create graphs from within Python using the gnuplot plotting program.""" - homepage = "http://gnuplot-py.sourceforge.net/" - url = "http://downloads.sourceforge.net/project/gnuplot-py/Gnuplot-py/1.8/gnuplot-py-1.8.tar.gz" - - version('1.8', 'abd6f571e7aec68ae7db90a5217cd5b1') - - extends('python') - depends_on('py-numpy') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-h5py/package.py b/var/spack/packages/py-h5py/package.py deleted file mode 100644 index 6293da5407..0000000000 --- a/var/spack/packages/py-h5py/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * -import re - -class PyH5py(Package): - """The h5py package provides both a high- and low-level interface to the HDF5 library from Python.""" - homepage = "https://pypi.python.org/pypi/h5py" - url = "https://pypi.python.org/packages/source/h/h5py/h5py-2.4.0.tar.gz" - - version('2.4.0', '80c9a94ae31f84885cc2ebe1323d6758') - version('2.5.0', '6e4301b5ad5da0d51b0a1e5ac19e3b74') - - extends('python', ignore=lambda f: re.match(r'bin/cy*', f)) - depends_on('hdf5') - depends_on('py-numpy') - depends_on('py-cython') - - def install(self, spec, prefix): - python('setup.py', 'configure', '--hdf5=%s' % spec['hdf5'].prefix) - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-ipython/package.py b/var/spack/packages/py-ipython/package.py deleted file mode 100644 index 8d0e64a07f..0000000000 --- a/var/spack/packages/py-ipython/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class PyIpython(Package): - """IPython provides a rich toolkit to help you make the most out of using Python interactively.""" - homepage = "https://pypi.python.org/pypi/ipython" - url = "https://pypi.python.org/packages/source/i/ipython/ipython-2.3.1.tar.gz" - - version('2.3.1', '2b7085525dac11190bfb45bb8ec8dcbf') - version('3.1.0', 'a749d90c16068687b0ec45a27e72ef8f') - - extends('python') - depends_on('py-pygments') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-libxml2/package.py b/var/spack/packages/py-libxml2/package.py deleted file mode 100644 index 59005428e4..0000000000 --- a/var/spack/packages/py-libxml2/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class PyLibxml2(Package): - """A Python wrapper around libxml2.""" - homepage = "https://xmlsoft.org/python.html" - url = "ftp://xmlsoft.org/libxml2/python/libxml2-python-2.6.21.tar.gz" - - version('2.6.21', '229dd2b3d110a77defeeaa73af83f7f3') - - extends('python') - depends_on('libxml2') - depends_on('libxslt') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-lockfile/package.py b/var/spack/packages/py-lockfile/package.py deleted file mode 100644 index 8722914d94..0000000000 --- a/var/spack/packages/py-lockfile/package.py +++ /dev/null @@ -1,23 +0,0 @@ -from spack import * - -class PyLockfile(Package): - """The lockfile package exports a LockFile class which provides a - simple API for locking files. Unlike the Windows msvcrt.locking - function, the fcntl.lockf and flock functions, and the - deprecated posixfile module, the API is identical across both - Unix (including Linux and Mac) and Windows platforms. The lock - mechanism relies on the atomic nature of the link (on Unix) and - mkdir (on Windows) system calls. An implementation based on - SQLite is also provided, more as a demonstration of the - possibilities it provides than as production-quality code. - """ - homepage = "https://pypi.python.org/pypi/lockfile" - url = "https://pypi.python.org/packages/source/l/lockfile/lockfile-0.10.2.tar.gz" - - version('0.10.2', '1aa6175a6d57f082cd12e7ac6102ab15') - - extends("python") - depends_on("py-setuptools") - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-mako/package.py b/var/spack/packages/py-mako/package.py deleted file mode 100644 index 3e91ffd8e5..0000000000 --- a/var/spack/packages/py-mako/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class PyMako(Package): - """A super-fast templating language that borrows the best - ideas from the existing templating languages.""" - - homepage = "https://pypi.python.org/pypi/mako" - url = "https://pypi.python.org/packages/source/M/Mako/Mako-1.0.1.tar.gz" - - version('1.0.1', '9f0aafd177b039ef67b90ea350497a54') - - depends_on('py-setuptools') - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-matplotlib/package.py b/var/spack/packages/py-matplotlib/package.py deleted file mode 100644 index e7ce3dfd24..0000000000 --- a/var/spack/packages/py-matplotlib/package.py +++ /dev/null @@ -1,47 +0,0 @@ -from spack import * -import os - -class PyMatplotlib(Package): - """Python plotting package.""" - homepage = "https://pypi.python.org/pypi/matplotlib" - url = "https://pypi.python.org/packages/source/m/matplotlib/matplotlib-1.4.2.tar.gz" - - version('1.4.2', '7d22efb6cce475025733c50487bd8898') - version('1.4.3', '86af2e3e3c61849ac7576a6f5ca44267') - - extends('python', ignore=r'bin/nosetests.*$') - - depends_on('py-pyside') - depends_on('py-ipython') - depends_on('py-pyparsing') - depends_on('py-six') - depends_on('py-dateutil') - depends_on('py-pytz') - depends_on('py-nose') - depends_on('py-numpy') - - depends_on('qt') - depends_on('bzip2') - depends_on('tcl') - depends_on('tk') - depends_on('qhull') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) - - if str(self.version) in ['1.4.2', '1.4.3']: - # hack to fix configuration file - config_file = None - for p,d,f in os.walk(prefix.lib): - for file in f: - if file.find('matplotlibrc') != -1: - config_file = join_path(p, 'matplotlibrc') - print config_file - if config_file == None: - raise InstallError('could not find config file') - filter_file(r'backend : pyside', - 'backend : Qt4Agg', - config_file) - filter_file(r'#backend.qt4 : PyQt4', - 'backend.qt4 : PySide', - config_file) diff --git a/var/spack/packages/py-mock/package.py b/var/spack/packages/py-mock/package.py deleted file mode 100644 index 3b08428ba0..0000000000 --- a/var/spack/packages/py-mock/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class PyMock(Package): - """mock is a library for testing in Python. It allows you to replace parts - of your system under test with mock objects and make assertions about how - they have been used.""" - - homepage = "https://github.com/testing-cabal/mock" - url = "https://pypi.python.org/packages/source/m/mock/mock-1.3.0.tar.gz" - - version('1.3.0', '73ee8a4afb3ff4da1b4afa287f39fdeb') - - extends('python') - depends_on('py-setuptools@17.1:') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-mpi4py/package.py b/var/spack/packages/py-mpi4py/package.py deleted file mode 100644 index 8001689a18..0000000000 --- a/var/spack/packages/py-mpi4py/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PyMpi4py(Package): - """This package provides Python bindings for the Message Passing Interface (MPI) standard. It is implemented on top of the MPI-1/MPI-2 specification and exposes an API which grounds on the standard MPI-2 C++ bindings.""" - homepage = "https://pypi.python.org/pypi/mpi4py" - url = "https://pypi.python.org/packages/source/m/mpi4py/mpi4py-1.3.1.tar.gz" - - version('1.3.1', 'dbe9d22bdc8ed965c23a7ceb6f32fc3c') - extends('python') - depends_on('py-setuptools') - depends_on('mpi') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-mx/package.py b/var/spack/packages/py-mx/package.py deleted file mode 100644 index 717ee0562b..0000000000 --- a/var/spack/packages/py-mx/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PyMx(Package): - """The eGenix.com mx Base Distribution for Python is a collection of professional quality software tools which enhance Python's usability in many important areas such as fast text searching, date/time processing and high speed data types.""" - homepage = "http://www.egenix.com/products/python/mxBase/" - url = "https://downloads.egenix.com/python/egenix-mx-base-3.2.8.tar.gz" - - version('3.2.8', '9d9d3a25f9dc051a15e97f452413423b') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-nose/package.py b/var/spack/packages/py-nose/package.py deleted file mode 100644 index e7c6cf0264..0000000000 --- a/var/spack/packages/py-nose/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class PyNose(Package): - """nose extends the test loading and running features of unittest, - making it easier to write, find and run tests.""" - - homepage = "https://pypi.python.org/pypi/nose" - url = "https://pypi.python.org/packages/source/n/nose/nose-1.3.4.tar.gz" - - version('1.3.4', '6ed7169887580ddc9a8e16048d38274d') - version('1.3.6', '0ca546d81ca8309080fc80cb389e7a16') - - extends('python', ignore=r'bin/nosetests.*$') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-numpy/package.py b/var/spack/packages/py-numpy/package.py deleted file mode 100644 index efa109a3e9..0000000000 --- a/var/spack/packages/py-numpy/package.py +++ /dev/null @@ -1,28 +0,0 @@ -from spack import * - -class PyNumpy(Package): - """array processing for numbers, strings, records, and objects.""" - homepage = "https://pypi.python.org/pypi/numpy" - url = "https://pypi.python.org/packages/source/n/numpy/numpy-1.9.1.tar.gz" - - version('1.9.1', '78842b73560ec378142665e712ae4ad9') - version('1.9.2', 'a1ed53432dbcd256398898d35bc8e645') - - extends('python') - depends_on('py-nose') - depends_on('netlib-blas+fpic') - depends_on('netlib-lapack+shared') - - def patch(self): - filter_file( - "possible_executables = \['(gfortran|g77|ifort|efl)", - "possible_executables = ['fc", - "numpy/distutils/fcompiler/gnu.py", - "numpy/distutils/fcompiler/intel.py") - - def install(self, spec, prefix): - with open('site.cfg', 'w') as f: - f.write('[DEFAULT]\n') - f.write('libraries=lapack,blas\n') - f.write('library_dirs=%s/lib:%s/lib\n' % (spec['blas'].prefix, spec['lapack'].prefix)) - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pandas/package.py b/var/spack/packages/py-pandas/package.py deleted file mode 100644 index 5b9997faa9..0000000000 --- a/var/spack/packages/py-pandas/package.py +++ /dev/null @@ -1,25 +0,0 @@ -from spack import * -import os - -class PyPandas(Package): - """pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with relational or labeled data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python. Additionally, it has the broader goal of becoming the most powerful and flexible open source data analysis / manipulation tool available in any language.""" - homepage = "http://pandas.pydata.org/" - url = "https://pypi.python.org/packages/source/p/pandas/pandas-0.16.0.tar.gz#md5=bfe311f05dc0c351f8955fbd1e296e73" - - version('0.16.0', 'bfe311f05dc0c351f8955fbd1e296e73') - version('0.16.1', 'fac4f25748f9610a3e00e765474bdea8') - - extends('python') - depends_on('py-dateutil') - depends_on('py-numpy') - depends_on('py-matplotlib') - depends_on('py-scipy') - depends_on('py-setuptools') - depends_on('py-pytz') - depends_on('libdrm') - depends_on('libpciaccess') - depends_on('llvm') - depends_on('mesa') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pexpect/package.py b/var/spack/packages/py-pexpect/package.py deleted file mode 100644 index ff5fac84e0..0000000000 --- a/var/spack/packages/py-pexpect/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PyPexpect(Package): - """Pexpect allows easy control of interactive console applications.""" - homepage = "https://pypi.python.org/pypi/pexpect" - url = "https://pypi.python.org/packages/source/p/pexpect/pexpect-3.3.tar.gz" - - version('3.3', '0de72541d3f1374b795472fed841dce8') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pil/package.py b/var/spack/packages/py-pil/package.py deleted file mode 100644 index 743b761981..0000000000 --- a/var/spack/packages/py-pil/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PyPil(Package): - """The Python Imaging Library (PIL) adds image processing capabilities to your Python interpreter. This library supports many file formats, and provides powerful image processing and graphics capabilities.""" - - homepage = "http://www.pythonware.com/products/pil/" - url = "http://effbot.org/media/downloads/Imaging-1.1.7.tar.gz" - - version('1.1.7', 'fc14a54e1ce02a0225be8854bfba478e') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pmw/package.py b/var/spack/packages/py-pmw/package.py deleted file mode 100644 index 56131811e9..0000000000 --- a/var/spack/packages/py-pmw/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PyPmw(Package): - """Pmw is a toolkit for building high-level compound widgets, or megawidgets, constructed using other widgets as component parts.""" - homepage = "https://pypi.python.org/pypi/Pmw" - url = "https://pypi.python.org/packages/source/P/Pmw/Pmw-2.0.0.tar.gz" - - version('2.0.0', 'c7c3f26c4f5abaa99807edefee578fc0') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pychecker/package.py b/var/spack/packages/py-pychecker/package.py deleted file mode 100644 index bda5a746aa..0000000000 --- a/var/spack/packages/py-pychecker/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PyPychecker(Package): - """""" - homepage = "http://pychecker.sourceforge.net/" - url = "http://sourceforge.net/projects/pychecker/files/pychecker/0.8.19/pychecker-0.8.19.tar.gz" - - version('0.8.19', 'c37182863dfb09209d6ba4f38fce9d2b') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pycparser/package.py b/var/spack/packages/py-pycparser/package.py deleted file mode 100644 index f2bb679d25..0000000000 --- a/var/spack/packages/py-pycparser/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class PyPycparser(Package): - """pycparser is a complete parser of the C language, written in pure python""" - homepage = "https://github.com/eliben/pycparser" - url = "https://pypi.python.org/packages/source/p/pycparser/pycparser-2.13.tar.gz" - - version('2.13', 'e4fe1a2d341b22e25da0d22f034ef32f') - - - extends('python') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pyelftools/package.py b/var/spack/packages/py-pyelftools/package.py deleted file mode 100644 index d5ad32e624..0000000000 --- a/var/spack/packages/py-pyelftools/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PyPyelftools(Package): - """A pure-Python library for parsing and analyzing ELF files and DWARF debugging information""" - homepage = "https://pypi.python.org/pypi/pyelftools" - url = "https://pypi.python.org/packages/source/p/pyelftools/pyelftools-0.23.tar.gz" - - version('0.23', 'aa7cefa8bd2f63d7b017440c9084f310') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pygments/package.py b/var/spack/packages/py-pygments/package.py deleted file mode 100644 index 7e07bf6869..0000000000 --- a/var/spack/packages/py-pygments/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class PyPygments(Package): - """Pygments is a syntax highlighting package written in Python.""" - homepage = "https://pypi.python.org/pypi/pygments" - url = "https://pypi.python.org/packages/source/P/Pygments/Pygments-2.0.1.tar.gz" - - version('2.0.1', 'e0daf4c14a4fe5b630da765904de4d6c') - version('2.0.2', '238587a1370d62405edabd0794b3ec4a') - - extends('python') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pylint/package.py b/var/spack/packages/py-pylint/package.py deleted file mode 100644 index 9579708c29..0000000000 --- a/var/spack/packages/py-pylint/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * -import re - -class PyPylint(Package): - """array processing for numbers, strings, records, and objects.""" - homepage = "https://pypi.python.org/pypi/pylint" - url = "https://pypi.python.org/packages/source/p/pylint/pylint-1.4.1.tar.gz" - - version('1.4.1', 'df7c679bdcce5019389038847e4de622') - version('1.4.3', '5924c1c7ca5ca23647812f5971d0ea44') - - extends('python') - depends_on('py-nose') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pypar/package.py b/var/spack/packages/py-pypar/package.py deleted file mode 100644 index af9c76ccd8..0000000000 --- a/var/spack/packages/py-pypar/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PyPypar(Package): - """Pypar is an efficient but easy-to-use module that allows programs written in Python to run in parallel on multiple processors and communicate using MPI.""" - homepage = "http://code.google.com/p/pypar/" - url = "https://pypar.googlecode.com/files/pypar-2.1.5_108.tgz" - - version('2.1.5_108', '7a1f28327d2a3b679f9455c843d850b8', url='https://pypar.googlecode.com/files/pypar-2.1.5_108.tgz') - extends('python') - depends_on('mpi') - - def install(self, spec, prefix): - with working_dir('source'): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pyparsing/package.py b/var/spack/packages/py-pyparsing/package.py deleted file mode 100644 index a6e50ad139..0000000000 --- a/var/spack/packages/py-pyparsing/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PyPyparsing(Package): - """A Python Parsing Module.""" - homepage = "https://pypi.python.org/pypi/pyparsing" - url = "https://pypi.python.org/packages/source/p/pyparsing/pyparsing-2.0.3.tar.gz" - - version('2.0.3', '0fe479be09fc2cf005f753d3acc35939') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-pyqt/package.py b/var/spack/packages/py-pyqt/package.py deleted file mode 100644 index 8edca105bb..0000000000 --- a/var/spack/packages/py-pyqt/package.py +++ /dev/null @@ -1,24 +0,0 @@ -from spack import * - -class PyPyqt(Package): - """PyQt is a set of Python v2 and v3 bindings for Digia's Qt - application framework and runs on all platforms supported by Qt - including Windows, MacOS/X and Linux.""" - homepage = "http://www.riverbankcomputing.com/software/pyqt/intro" - url = "http://sourceforge.net/projects/pyqt/files/PyQt4/PyQt-4.11.3/PyQt-x11-gpl-4.11.3.tar.gz" - - version('4.11.3', '997c3e443165a89a559e0d96b061bf70') - - extends('python') - depends_on('py-sip') - - # TODO: allow qt5 when conditional deps are supported. - # TODO: Fix version matching so that @4 works like @:4 - depends_on('qt@:4') - - def install(self, spec, prefix): - python('configure.py', - '--confirm-license', - '--destdir=%s' % site_packages_dir) - make() - make('install') diff --git a/var/spack/packages/py-pyside/package.py b/var/spack/packages/py-pyside/package.py deleted file mode 100644 index bb5da44d02..0000000000 --- a/var/spack/packages/py-pyside/package.py +++ /dev/null @@ -1,45 +0,0 @@ -from spack import * -import os - -class PyPyside(Package): - """array processing for numbers, strings, records, and objects.""" - homepage = "https://pypi.python.org/pypi/pyside" - url = "https://pypi.python.org/packages/source/P/PySide/PySide-1.2.2.tar.gz" - - version('1.2.2', 'c45bc400c8a86d6b35f34c29e379e44d') - - # TODO: make build dependency - # depends_on("cmake") - - extends('python') - depends_on('py-setuptools') - depends_on('qt@:4') - - def patch(self): - """Undo PySide RPATH handling and add Spack RPATH.""" - # Figure out the special RPATH - pypkg = self.spec['python'].package - rpath = self.rpath - rpath.append(os.path.join(self.prefix, pypkg.site_packages_dir, 'PySide')) - - # Add Spack's standard CMake args to the sub-builds. - # They're called BY setup.py so we have to patch it. - filter_file( - r'OPTION_CMAKE,', - r'OPTION_CMAKE, ' + ( - '"-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=FALSE", ' - '"-DCMAKE_INSTALL_RPATH=%s",' % ':'.join(rpath)), - 'setup.py') - - # PySide tries to patch ELF files to remove RPATHs - # Disable this and go with the one we set. - filter_file( - r'^\s*rpath_cmd\(pyside_path, srcpath\)', - r'#rpath_cmd(pyside_path, srcpath)', - 'pyside_postinstall.py') - - - def install(self, spec, prefix): - python('setup.py', 'install', - '--prefix=%s' % prefix, - '--jobs=%s' % make_jobs) diff --git a/var/spack/packages/py-python-daemon/package.py b/var/spack/packages/py-python-daemon/package.py deleted file mode 100644 index 12cbe9101c..0000000000 --- a/var/spack/packages/py-python-daemon/package.py +++ /dev/null @@ -1,26 +0,0 @@ -from spack import * - -class PyPythonDaemon(Package): - """Library to implement a well-behaved Unix daemon process. - - This library implements the well-behaved daemon specification of - PEP Standard daemon process. - - A well-behaved Unix daemon process is tricky to get right, but the - required steps are much the same for every daemon program. A - DaemonContext instance holds the behaviour and configured process - environment for the program; use the instance as a context manager - to enter a daemon state. - """ - homepage = "https://pypi.python.org/pypi/python-daemon/" - url = "https://pypi.python.org/packages/source/p/python-daemon/python-daemon-2.0.5.tar.gz" - - version('2.0.5', '73e7f49f525c51fa4a995aea4d80de41') - - extends("python") - depends_on("py-setuptools") - depends_on("py-lockfile") - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) - diff --git a/var/spack/packages/py-pytz/package.py b/var/spack/packages/py-pytz/package.py deleted file mode 100644 index da6311a784..0000000000 --- a/var/spack/packages/py-pytz/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PyPytz(Package): - """World timezone definitions, modern and historical.""" - homepage = "https://pypi.python.org/pypi/pytz" - url = "https://pypi.python.org/packages/source/p/pytz/pytz-2014.10.tar.gz" - - version('2014.10', 'eb1cb941a20c5b751352c52486aa1dd7') - version('2015.4', '417a47b1c432d90333e42084a605d3d8') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-rpy2/package.py b/var/spack/packages/py-rpy2/package.py deleted file mode 100644 index a0b03d03e3..0000000000 --- a/var/spack/packages/py-rpy2/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class PyRpy2(Package): - """rpy2 is a redesign and rewrite of rpy. It is providing a low-level interface to R from Python, a proposed high-level interface, including wrappers to graphical libraries, as well as R-like structures and functions.""" - homepage = "https://pypi.python.org/pypi/rpy2" - url = "https://pypi.python.org/packages/source/r/rpy2/rpy2-2.5.4.tar.gz" - - version('2.5.4', '115a20ac30883f096da2bdfcab55196d') - version('2.5.6', 'a36e758b633ce6aec6a5f450bfee980f') - - extends('python') - depends_on('py-setuptools') - - depends_on('R') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-scientificpython/package.py b/var/spack/packages/py-scientificpython/package.py deleted file mode 100644 index df2c86caac..0000000000 --- a/var/spack/packages/py-scientificpython/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class PyScientificpython(Package): - """ScientificPython is a collection of Python modules for - scientific computing. It contains support for geometry, - mathematical functions, statistics, physical units, IO, - visualization, and parallelization.""" - - homepage = "https://sourcesup.renater.fr/projects/scientific-py/" - url = "https://sourcesup.renater.fr/frs/download.php/file/4411/ScientificPython-2.8.1.tar.gz" - version('2.8.1', '73ee0df19c7b58cdf2954261f0763c77') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-scikit-learn/package.py b/var/spack/packages/py-scikit-learn/package.py deleted file mode 100644 index 5b078ce901..0000000000 --- a/var/spack/packages/py-scikit-learn/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PyScikitLearn(Package): - """""" - homepage = "https://pypi.python.org/pypi/scikit-learn" - url = "https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz" - - version('0.15.2', 'd9822ad0238e17b382a3c756ea94fe0d') - version('0.16.1', '363ddda501e3b6b61726aa40b8dbdb7e') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-scipy/package.py b/var/spack/packages/py-scipy/package.py deleted file mode 100644 index 3a1124cc15..0000000000 --- a/var/spack/packages/py-scipy/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class PyScipy(Package): - """Scientific Library for Python.""" - homepage = "https://pypi.python.org/pypi/scipy" - url = "https://pypi.python.org/packages/source/s/scipy/scipy-0.15.0.tar.gz" - - version('0.15.0', '639112f077f0aeb6d80718dc5019dc7a') - version('0.15.1', 'be56cd8e60591d6332aac792a5880110') - - extends('python') - depends_on('py-nose') - depends_on('py-numpy') - depends_on('blas') - depends_on('lapack') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-setuptools/package.py b/var/spack/packages/py-setuptools/package.py deleted file mode 100644 index 760ad4d6db..0000000000 --- a/var/spack/packages/py-setuptools/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class PySetuptools(Package): - """Easily download, build, install, upgrade, and uninstall Python packages.""" - homepage = "https://pypi.python.org/pypi/setuptools" - url = "https://pypi.python.org/packages/source/s/setuptools/setuptools-11.3.tar.gz" - - version('11.3.1', '01f69212e019a2420c1693fb43593930') - version('16.0', '0ace0b96233516fc5f7c857d086aa3ad') - version('18.1', 'f72e87f34fbf07f299f6cb46256a0b06') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-shiboken/package.py b/var/spack/packages/py-shiboken/package.py deleted file mode 100644 index e4bf4ce07e..0000000000 --- a/var/spack/packages/py-shiboken/package.py +++ /dev/null @@ -1,45 +0,0 @@ -from spack import * -import os - -class PyShiboken(Package): - """Shiboken generates bindings for C++ libraries using CPython source code.""" - homepage = "https://shiboken.readthedocs.org/" - url = "https://pypi.python.org/packages/source/S/Shiboken/Shiboken-1.2.2.tar.gz" - - version('1.2.2', '345cfebda221f525842e079a6141e555') - - # TODO: make build dependency - # depends_on("cmake") - - extends('python') - depends_on("py-setuptools") - depends_on("libxml2") - depends_on("qt@:4.8") - - def patch(self): - """Undo Shiboken RPATH handling and add Spack RPATH.""" - # Add Spack's standard CMake args to the sub-builds. - # They're called BY setup.py so we have to patch it. - pypkg = self.spec['python'].package - rpath = self.rpath - rpath.append(os.path.join(self.prefix, pypkg.site_packages_dir, 'Shiboken')) - - filter_file( - r'OPTION_CMAKE,', - r'OPTION_CMAKE, ' + ( - '"-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=FALSE", ' - '"-DCMAKE_INSTALL_RPATH=%s",' % ':'.join(rpath)), - 'setup.py') - - # Shiboken tries to patch ELF files to remove RPATHs - # Disable this and go with the one we set. - filter_file( - r'^\s*rpath_cmd\(shiboken_path, srcpath\)', - r'#rpath_cmd(shiboken_path, srcpath)', - 'shiboken_postinstall.py') - - - def install(self, spec, prefix): - python('setup.py', 'install', - '--prefix=%s' % prefix, - '--jobs=%s' % make_jobs) diff --git a/var/spack/packages/py-sip/package.py b/var/spack/packages/py-sip/package.py deleted file mode 100644 index e4a6fb6961..0000000000 --- a/var/spack/packages/py-sip/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * -import os - -class PySip(Package): - """SIP is a tool that makes it very easy to create Python bindings for C and C++ libraries.""" - homepage = "http://www.riverbankcomputing.com/software/sip/intro" - url = "http://sourceforge.net/projects/pyqt/files/sip/sip-4.16.5/sip-4.16.5.tar.gz" - - version('4.16.5', '6d01ea966a53e4c7ae5c5e48c40e49e5') - version('4.16.7', '32abc003980599d33ffd789734de4c36') - - extends('python') - - def install(self, spec, prefix): - python('configure.py', - '--destdir=%s' % site_packages_dir, - '--bindir=%s' % spec.prefix.bin, - '--incdir=%s' % python_include_dir, - '--sipdir=%s' % os.path.join(spec.prefix.share, 'sip')) - make() - make('install') diff --git a/var/spack/packages/py-six/package.py b/var/spack/packages/py-six/package.py deleted file mode 100644 index 05c5bd00a9..0000000000 --- a/var/spack/packages/py-six/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class PySix(Package): - """Python 2 and 3 compatibility utilities.""" - homepage = "https://pypi.python.org/pypi/six" - url = "https://pypi.python.org/packages/source/s/six/six-1.9.0.tar.gz" - - version('1.9.0', '476881ef4012262dfc8adc645ee786c4') - - extends('python') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-sphinx/package.py b/var/spack/packages/py-sphinx/package.py deleted file mode 100644 index ec2e89a098..0000000000 --- a/var/spack/packages/py-sphinx/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PySphinx(Package): - """Sphinx Documentation Generator.""" - homepage = "http://sphinx-doc.org" - url = "https://pypi.python.org/packages/source/S/Sphinx/Sphinx-1.3.1.tar.gz" - - version('1.3.1', '8786a194acf9673464c5455b11fd4332') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-sympy/package.py b/var/spack/packages/py-sympy/package.py deleted file mode 100644 index c17e35b95f..0000000000 --- a/var/spack/packages/py-sympy/package.py +++ /dev/null @@ -1,13 +0,0 @@ -from spack import * - -class PySympy(Package): - """SymPy is a Python library for symbolic mathematics.""" - homepage = "https://pypi.python.org/pypi/sympy" - url = "https://pypi.python.org/packages/source/s/sympy/sympy-0.7.6.tar.gz" - - version('0.7.6', '3d04753974306d8a13830008e17babca') - - extends('python') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-virtualenv/package.py b/var/spack/packages/py-virtualenv/package.py deleted file mode 100644 index 037a6fc59f..0000000000 --- a/var/spack/packages/py-virtualenv/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * -import shutil - -class PyVirtualenv(Package): - """virtualenv is a tool to create isolated Python environments.""" - homepage = "http://virtualenv.readthedocs.org/projects/virtualenv/" - url = "https://pypi.python.org/packages/source/v/virtualenv/virtualenv-1.11.6.tar.gz" - - version('1.11.6', 'f61cdd983d2c4e6aeabb70b1060d6f49') - version('13.0.1', '1ffc011bde6667f0e37ecd976f4934db') - - extends('python') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/py-yapf/package.py b/var/spack/packages/py-yapf/package.py deleted file mode 100644 index 12ef191515..0000000000 --- a/var/spack/packages/py-yapf/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class PyYapf(Package): - """ Yet Another Python Formatter """ - homepage = "https://github.com/google/yapf" - # base https://pypi.python.org/pypi/cffi - url = "https://github.com/google/yapf/archive/v0.2.1.tar.gz" - - version('0.2.1', '348ccf86cf2057872e4451b204fb914c') - - extends('python') - depends_on('py-setuptools') - - def install(self, spec, prefix): - python('setup.py', 'install', '--prefix=%s' % prefix) diff --git a/var/spack/packages/python/package.py b/var/spack/packages/python/package.py deleted file mode 100644 index 000881a846..0000000000 --- a/var/spack/packages/python/package.py +++ /dev/null @@ -1,160 +0,0 @@ -import os -import re -from contextlib import closing -from llnl.util.lang import match_predicate - -from spack import * -import spack - - -class Python(Package): - """The Python programming language.""" - homepage = "http://www.python.org" - url = "http://www.python.org/ftp/python/2.7.8/Python-2.7.8.tar.xz" - - extendable = True - - version('2.7.8', 'd235bdfa75b8396942e360a70487ee00') - version('2.7.10', 'c685ef0b8e9f27b5e3db5db12b268ac6') - - depends_on("openssl") - depends_on("bzip2") - depends_on("readline") - depends_on("ncurses") - depends_on("sqlite") - - def install(self, spec, prefix): - # Need this to allow python build to find the Python installation. - env['PYTHONHOME'] = prefix - - # Rest of install is pretty standard. - configure("--prefix=%s" % prefix, - "--with-threads", - "--enable-shared") - make() - make("install") - - - # ======================================================================== - # Set up environment to make install easy for python extensions. - # ======================================================================== - - @property - def python_lib_dir(self): - return os.path.join('lib', 'python%d.%d' % self.version[:2]) - - - @property - def python_include_dir(self): - return os.path.join('include', 'python%d.%d' % self.version[:2]) - - - @property - def site_packages_dir(self): - return os.path.join(self.python_lib_dir, 'site-packages') - - - def setup_dependent_environment(self, module, spec, ext_spec): - """Called before python modules' install() methods. - - In most cases, extensions will only need to have one line:: - - python('setup.py', 'install', '--prefix=%s' % prefix) - """ - # Python extension builds can have a global python executable function - module.python = Executable(join_path(spec.prefix.bin, 'python')) - - # Add variables for lib/pythonX.Y and lib/pythonX.Y/site-packages dirs. - module.python_lib_dir = os.path.join(ext_spec.prefix, self.python_lib_dir) - module.python_include_dir = os.path.join(ext_spec.prefix, self.python_include_dir) - module.site_packages_dir = os.path.join(ext_spec.prefix, self.site_packages_dir) - - # Make the site packages directory if it does not exist already. - mkdirp(module.site_packages_dir) - - # Set PYTHONPATH to include site-packages dir for the - # extension and any other python extensions it depends on. - python_paths = [] - for d in ext_spec.traverse(): - if d.package.extends(self.spec): - python_paths.append(os.path.join(d.prefix, self.site_packages_dir)) - os.environ['PYTHONPATH'] = ':'.join(python_paths) - - - # ======================================================================== - # Handle specifics of activating and deactivating python modules. - # ======================================================================== - - def python_ignore(self, ext_pkg, args): - """Add some ignore files to activate/deactivate args.""" - ignore_arg = args.get('ignore', lambda f: False) - - # Always ignore easy-install.pth, as it needs to be merged. - patterns = [r'easy-install\.pth$'] - - # Ignore pieces of setuptools installed by other packages. - if ext_pkg.name != 'py-setuptools': - patterns.append(r'/site\.pyc?$') - patterns.append(r'setuptools\.pth') - patterns.append(r'bin/easy_install[^/]*$') - patterns.append(r'setuptools.*egg$') - - return match_predicate(ignore_arg, patterns) - - - def write_easy_install_pth(self, exts): - paths = [] - for ext in sorted(exts.values()): - ext_site_packages = os.path.join(ext.prefix, self.site_packages_dir) - easy_pth = "%s/easy-install.pth" % ext_site_packages - - if not os.path.isfile(easy_pth): - continue - - with closing(open(easy_pth)) as f: - for line in f: - line = line.rstrip() - - # Skip lines matching these criteria - if not line: continue - if re.search(r'^(import|#)', line): continue - if (ext.name != 'py-setuptools' and - re.search(r'setuptools.*egg$', line)): continue - - paths.append(line) - - site_packages = os.path.join(self.prefix, self.site_packages_dir) - main_pth = "%s/easy-install.pth" % site_packages - - if not paths: - if os.path.isfile(main_pth): - os.remove(main_pth) - - else: - with closing(open(main_pth, 'w')) as f: - f.write("import sys; sys.__plen = len(sys.path)\n") - for path in paths: - f.write("%s\n" % path) - f.write("import sys; new=sys.path[sys.__plen:]; del sys.path[sys.__plen:]; " - "p=getattr(sys,'__egginsert',0); sys.path[p:p]=new; sys.__egginsert = p+len(new)\n") - - - def activate(self, ext_pkg, **args): - ignore=self.python_ignore(ext_pkg, args) - args.update(ignore=ignore) - - super(Python, self).activate(ext_pkg, **args) - - exts = spack.install_layout.extension_map(self.spec) - exts[ext_pkg.name] = ext_pkg.spec - self.write_easy_install_pth(exts) - - - def deactivate(self, ext_pkg, **args): - args.update(ignore=self.python_ignore(ext_pkg, args)) - super(Python, self).deactivate(ext_pkg, **args) - - exts = spack.install_layout.extension_map(self.spec) - if ext_pkg.name in exts: # Make deactivate idempotent. - del exts[ext_pkg.name] - self.write_easy_install_pth(exts) diff --git a/var/spack/packages/qhull/package.py b/var/spack/packages/qhull/package.py deleted file mode 100644 index 9da4078a70..0000000000 --- a/var/spack/packages/qhull/package.py +++ /dev/null @@ -1,27 +0,0 @@ -from spack import * - -class Qhull(Package): - """Qhull computes the convex hull, Delaunay triangulation, Voronoi - diagram, halfspace intersection about a point, furt hest-site - Delaunay triangulation, and furthest-site Voronoi diagram. The - source code runs in 2-d, 3-d, 4-d, and higher dimensions. Qhull - implements the Quickhull algorithm for computing the convex - hull. It handles roundoff errors from floating point - arithmetic. It computes volumes, surface areas, and - approximations to the convex hull. - - Qhull does not support triangulation of non-convex surfaces, - mesh generation of non-convex objects, medium-sized inputs in - 9-D and higher, alpha shapes, weighted Voronoi diagrams, - Voronoi volumes, or constrained Delaunay triangulations.""" - - homepage = "http://www.qhull.org" - - version('1.0', 'd0f978c0d8dfb2e919caefa56ea2953c', - url="http://www.qhull.org/download/qhull-2012.1-src.tgz") - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('..', *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/qt/package.py b/var/spack/packages/qt/package.py deleted file mode 100644 index 0e4abe3b1d..0000000000 --- a/var/spack/packages/qt/package.py +++ /dev/null @@ -1,109 +0,0 @@ -import os -from spack import * -import os - -class Qt(Package): - """Qt is a comprehensive cross-platform C++ application framework.""" - homepage = "http://qt.io" - list_url = 'http://download.qt-project.org/official_releases/qt/' - list_depth = 2 - - version('5.4.0', 'e8654e4b37dd98039ba20da7a53877e6', - url='http://download.qt-project.org/official_releases/qt/5.4/5.4.0/single/qt-everywhere-opensource-src-5.4.0.tar.gz') - version('5.3.2', 'febb001129927a70174467ecb508a682', - url='http://download.qt.io/archive/qt/5.3/5.3.2/single/qt-everywhere-opensource-src-5.3.2.tar.gz') - - version('5.2.1', 'a78408c887c04c34ce615da690e0b4c8', - url='http://download.qt.io/archive/qt/5.2/5.2.1/single/qt-everywhere-opensource-src-5.2.1.tar.gz') - version('4.8.6', '2edbe4d6c2eff33ef91732602f3518eb', - url="http://download.qt-project.org/official_releases/qt/4.8/4.8.6/qt-everywhere-opensource-src-4.8.6.tar.gz") - - # Use system openssl for security. - #depends_on("openssl") - - depends_on("glib") - depends_on("gtkplus") - depends_on("libxml2") - depends_on("zlib") - depends_on("dbus") - depends_on("libtiff") - depends_on("libpng") - depends_on("libmng") - depends_on("jpeg") - - # Webkit - # depends_on("gperf") - # depends_on("flex") - # depends_on("bison") - # depends_on("ruby") - # depends_on("icu4c") - - # OpenGL hardware acceleration - depends_on("mesa") - depends_on("libxcb") - - - def setup_dependent_environment(self, module, spec, dep_spec): - """Dependencies of Qt find it using the QTDIR environment variable.""" - os.environ['QTDIR'] = self.prefix - - - def patch(self): - if self.spec.satisfies('@4'): - qmake_conf = 'mkspecs/common/g++-base.conf' - qmake_unix_conf = 'mkspecs/common/g++-unix.conf' - elif self.spec.satisfies('@5'): - qmake_conf = 'qtbase/mkspecs/common/g++-base.conf' - qmake_unix_conf = 'qtbase/mkspecs/common/g++-unix.conf' - else: - return - - # Fix qmake compilers in the default mkspec - filter_file(r'^QMAKE_COMPILER *=.*$', 'QMAKE_COMPILER = cc', qmake_conf) - filter_file(r'^QMAKE_CC *=.*$', 'QMAKE_CC = cc', qmake_conf) - filter_file(r'^QMAKE_CXX *=.*$', 'QMAKE_CXX = c++', qmake_conf) - filter_file(r'^QMAKE_LFLAGS_NOUNDEF *\+?=.*$', 'QMAKE_LFLAGS_NOUNDEF =', qmake_unix_conf) - - - @property - def common_config_args(self): - return [ - '-prefix', self.prefix, - '-v', - '-opensource', - '-opengl', - "-release", - '-shared', - '-confirm-license', - '-openssl-linked', - '-dbus-linked', - '-optimized-qmake', - '-no-openvg', - '-no-pch', - # NIS is deprecated in more recent glibc - "-no-nis"] - # Don't disable all the database drivers, but should - # really get them into spack at some point. - - - @when('@4') - def configure(self): - configure('-fast', - '-no-webkit', - *self.common_config_args) - - - @when('@5') - def configure(self): - configure('-no-eglfs', - '-no-directfb', - '-qt-xcb', - # If someone wants to get a webkit build working, be my guest! - '-skip', 'qtwebkit', - *self.common_config_args) - - - def install(self, spec, prefix): - self.configure() - make() - make("install") diff --git a/var/spack/packages/qthreads/package.py b/var/spack/packages/qthreads/package.py deleted file mode 100644 index dacdb71524..0000000000 --- a/var/spack/packages/qthreads/package.py +++ /dev/null @@ -1,22 +0,0 @@ -from spack import * - -class Qthreads(Package): - """The qthreads API is designed to make using large numbers of - threads convenient and easy, and to allow portable access to - threading constructs used in massively parallel shared memory - environments. The API maps well to both MTA-style threading and - PIM-style threading, and we provide an implementation of this - interface in both a standard SMP context as well as the SST - context. The qthreads API provides access to full/empty-bit - (FEB) semantics, where every word of memory can be marked - either full or empty, and a thread can wait for any word to - attain either state.""" - homepage = "http://www.cs.sandia.gov/qthreads/" - url = "https://qthreads.googlecode.com/files/qthread-1.10.tar.bz2" - - version('1.10', '5af8c8bbe88c2a6d45361643780d1671') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/ravel/package.py b/var/spack/packages/ravel/package.py deleted file mode 100644 index 01fa941cfe..0000000000 --- a/var/spack/packages/ravel/package.py +++ /dev/null @@ -1,23 +0,0 @@ -from spack import * - -class Ravel(Package): - """Ravel is a parallel communication trace visualization tool that - orders events according to logical time.""" - - homepage = "https://github.com/scalability-llnl/ravel" - url = 'https://github.com/scalability-llnl/ravel/archive/v1.0.0.tar.gz' - - version('1.0.0', 'b25fece58331c2adfcce76c5036485c2') - - # TODO: make this a build dependency - depends_on('cmake@2.8.9:') - - depends_on('muster@1.0.1:') - depends_on('otf') - depends_on('otf2') - depends_on('qt@5:') - - def install(self, spec, prefix): - cmake('-Wno-dev', *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/readline/package.py b/var/spack/packages/readline/package.py deleted file mode 100644 index 1b870e0e7f..0000000000 --- a/var/spack/packages/readline/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * - -class Readline(Package): - """The GNU Readline library provides a set of functions for use by - applications that allow users to edit command li nes as they - are typed in. Both Emacs and vi editing modes are - available. The Readline library includes additional functions - to maintain a list of previously-entered command lines, to - recall and perhaps reedit those lines, and perform csh-like - history expansion on previous commands. """ - homepage = "http://cnswww.cns.cwru.edu/php/chet/readline/rltop.html" - url = "ftp://ftp.cwru.edu/pub/bash/readline-6.3.tar.gz" - - version('6.3', '33c8fb279e981274f485fd91da77e94a') - - depends_on("ncurses") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make("SHLIB_LIBS=-lncurses") - make("install") diff --git a/var/spack/packages/rose/add_spack_compiler_recognition.patch b/var/spack/packages/rose/add_spack_compiler_recognition.patch deleted file mode 100644 index ce61ae4e4c..0000000000 --- a/var/spack/packages/rose/add_spack_compiler_recognition.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/config/compiler-defs.m4 b/config/compiler-defs.m4 -index d7d85d2..780c8de 100644 ---- a/config/compiler-defs.m4 -+++ b/config/compiler-defs.m4 -@@ -28,7 +28,7 @@ dnl predefined by a specific compiler - # g++|gcc|mpicc|mpic++|mpicxx|mpiCC) - # TOO (2/16/2011): added support for tensilica compilers, assuming they are - # like GCC (they use a GCC front-end) -- g++*|gcc*|mpicc|mpic++|mpicxx|mpiCC|xt-xc++|xt-xcc) -+ cc*|c++*|g++*|gcc*|mpicc|mpic++|mpicxx|mpiCC|xt-xc++|xt-xcc) - BACKEND_GCC_MAJOR=`echo|$BACKEND_CXX_COMPILER -dumpversion | cut -d\. -f1` - BACKEND_GCC_MINOR=`echo|$BACKEND_CXX_COMPILER -dumpversion | cut -d\. -f2` - BACKEND_GCC_PATCHLEVEL=`echo|$BACKEND_CXX_COMPILER -dumpversion | cut -d\. -f3` diff --git a/var/spack/packages/rose/package.py b/var/spack/packages/rose/package.py deleted file mode 100644 index 1d7294acab..0000000000 --- a/var/spack/packages/rose/package.py +++ /dev/null @@ -1,39 +0,0 @@ -#------------------------------------------------------------------------------ -# Author: Justin Too <too1@llnl.gov> -#------------------------------------------------------------------------------ - -from spack import * - -class Rose(Package): - """A compiler infrastructure to build source-to-source program - transformation and analysis tools. - (Developed at Lawrence Livermore National Lab)""" - - homepage = "http://rosecompiler.org/" - url = "https://github.com/rose-compiler/edg4x-rose" - - version('master', branch='master', git='https://github.com/rose-compiler/edg4x-rose.git') - - patch('add_spack_compiler_recognition.patch') - - depends_on("autoconf@2.69") - depends_on("automake@1.14") - depends_on("libtool@2.4") - depends_on("boost@1.54.0") - depends_on("jdk@8u25-linux-x64") - - def install(self, spec, prefix): - # Bootstrap with autotools - bash = which('bash') - bash('build') - - # Configure, compile & install - with working_dir('rose-build', create=True): - boost = spec['boost'] - - configure = Executable('../configure') - configure("--prefix=" + prefix, - "--with-boost=" + boost.prefix, - "--disable-boost-version-check") - make("install-core") - diff --git a/var/spack/packages/ruby/package.py b/var/spack/packages/ruby/package.py deleted file mode 100644 index 6b6242362c..0000000000 --- a/var/spack/packages/ruby/package.py +++ /dev/null @@ -1,41 +0,0 @@ -from spack import * -import spack -import os - -class Ruby(Package): - """A dynamic, open source programming language with a focus on - simplicity and productivity.""" - - homepage = "https://www.ruby-lang.org/" - url = "http://cache.ruby-lang.org/pub/ruby/2.2/ruby-2.2.0.tar.gz" - - extendable = True - - version('2.2.0', 'cd03b28fd0b555970f5c4fd481700852') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") - - def setup_dependent_environment(self, module, spec, ext_spec): - """Called before ruby modules' install() methods. Sets GEM_HOME - and GEM_PATH to values appropriate for the package being built. - - In most cases, extensions will only need to have one line:: - - gem('install', '<gem-name>.gem') - """ - # Ruby extension builds have global ruby and gem functions - module.ruby = Executable(join_path(spec.prefix.bin, 'ruby')) - module.gem = Executable(join_path(spec.prefix.bin, 'gem')) - - # Set GEM_PATH to include dependent gem directories - ruby_paths = [] - for d in ext_spec.traverse(): - if d.package.extends(self.spec): - ruby_paths.append(d.prefix) - os.environ['GEM_PATH'] = ':'.join(ruby_paths) - # The actual installation path for this gem - os.environ['GEM_HOME'] = ext_spec.prefix diff --git a/var/spack/packages/samtools/package.py b/var/spack/packages/samtools/package.py deleted file mode 100644 index 72900398d8..0000000000 --- a/var/spack/packages/samtools/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Samtools(Package): - """SAM Tools provide various utilities for manipulating alignments in the SAM format, - including sorting, merging, indexing and generating - alignments in a per-position format""" - - homepage = "www.htslib.org" - version('1.2','988ec4c3058a6ceda36503eebecd4122',url = "https://github.com/samtools/samtools/releases/download/1.2/samtools-1.2.tar.bz2") - - depends_on("zlib") - depends_on("mpc") - parallel=False - patch("samtools1.2.patch",level=0) - - def install(self, spec, prefix): - make("prefix=%s" % prefix, "install") - diff --git a/var/spack/packages/samtools/samtools1.2.patch b/var/spack/packages/samtools/samtools1.2.patch deleted file mode 100644 index ead3ab4e2c..0000000000 --- a/var/spack/packages/samtools/samtools1.2.patch +++ /dev/null @@ -1,20 +0,0 @@ ---- Makefile 2015-02-03 08:27:34.000000000 -0800 -+++ Makefile.new 2015-07-21 10:38:27.881406892 -0700 -@@ -26,7 +26,7 @@ - CFLAGS = -g -Wall -O2 - LDFLAGS = - LDLIBS = --DFLAGS= -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_CURSES_LIB=1 -+DFLAGS= -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_CURSES_LIB=0 - LOBJS= bam_aux.o bam.o bam_import.o sam.o \ - sam_header.o bam_plbuf.o - AOBJS= bam_index.o bam_plcmd.o sam_view.o \ -@@ -37,7 +37,7 @@ - faidx.o stats.o stats_isize.o bam_flags.o bam_split.o \ - bam_tview.o bam_tview_curses.o bam_tview_html.o bam_lpileup.o - INCLUDES= -I. -I$(HTSDIR) --LIBCURSES= -lcurses # -lXCurses -+#LIBCURSES= -lcurses # -lXCurses - - prefix = /usr/local - exec_prefix = $(prefix) diff --git a/var/spack/packages/scalasca/package.py b/var/spack/packages/scalasca/package.py deleted file mode 100644 index cf7a40c1f5..0000000000 --- a/var/spack/packages/scalasca/package.py +++ /dev/null @@ -1,65 +0,0 @@ -# FIXME: Add copyright - -from spack import * - -class Scalasca(Package): - """Scalasca is a software tool that supports the performance optimization - of parallel programs by measuring and analyzing their runtime behavior. - The analysis identifies potential performance bottlenecks - in - particular those concerning communication and synchronization - and - offers guidance in exploring their causes.""" - - # FIXME: add a proper url for your package's homepage here. - homepage = "http://www.scalasca.org" - url = "http://apps.fz-juelich.de/scalasca/releases/scalasca/2.1/dist/scalasca-2.1.tar.gz" - - version('2.1', 'bab9c2b021e51e2ba187feec442b96e6', - url = 'http://apps.fz-juelich.de/scalasca/releases/scalasca/2.1/dist/scalasca-2.1.tar.gz' ) - - depends_on("mpi") - depends_on("otf2@1.4") - depends_on("cube@4.2.3") - - backend_user_provided = """\ -CC=cc -CXX=c++ -F77=f77 -FC=f90 -CFLAGS=-fPIC -CXXFLAGS=-fPIC -""" - frontend_user_provided = """\ -CC_FOR_BUILD=cc -CXX_FOR_BUILD=c++ -F77_FOR_BUILD=f70 -FC_FOR_BUILD=f90 -CFLAGS_FOR_BUILD=-fPIC -CXXFLAGS_FOR_BUILD=-fPIC -""" - mpi_user_provided = """\ -MPICC=mpicc -MPICXX=mpicxx -MPIF77=mpif77 -MPIFC=mpif90 -MPI_CFLAGS=-fPIC -MPI_CXXFLAGS=-fPIC -""" - - def install(self, spec, prefix): - configure_args = ["--prefix=%s" % prefix, - "--with-custom-compilers", - "--with-otf2=%s" % spec['otf2'].prefix.bin, - "--with-cube=%s" % spec['cube'].prefix.bin, - "--enable-shared"] - - configure(*configure_args) - - make() - make("install") - - # FIXME: Modify the configure line to suit your build system here. - configure("--prefix=%s" % prefix) - - # FIXME: Add logic to build and install here - make() - make("install") diff --git a/var/spack/packages/scorep/package.py b/var/spack/packages/scorep/package.py deleted file mode 100644 index f013bd1cbb..0000000000 --- a/var/spack/packages/scorep/package.py +++ /dev/null @@ -1,74 +0,0 @@ -# FIXME: Add copyright statement - -from spack import * - -class Scorep(Package): - """The Score-P measurement infrastructure is a highly scalable and - easy-to-use tool suite for profiling, event tracing, and online - analysis of HPC applications.""" - - # FIXME: add a proper url for your package's homepage here. - homepage = "http://www.vi-hps.org/projects/score-p" - url = "http://www.vi-hps.org/upload/packages/scorep/scorep-1.2.3.tar.gz" - - version('1.3', '9db6f957b7f51fa01377a9537867a55c', - url = 'http://www.vi-hps.org/upload/packages/scorep/scorep-1.3.tar.gz') - - version('1.2.3', '4978084e7cbd05b94517aa8beaea0817') - - depends_on("mpi") - depends_on("papi") - # depends_on("otf2@1.2:1.2.1") # only Score-P 1.2.x - depends_on("otf2") - depends_on("opari2") - depends_on("cube@4.2:4.2.3") - - backend_user_provided = """\ -CC=cc -CXX=c++ -F77=f77 -FC=f90 -CFLAGS=-fPIC -CXXFLAGS=-fPIC -""" - frontend_user_provided = """\ -CC_FOR_BUILD=cc -CXX_FOR_BUILD=c++ -F77_FOR_BUILD=f70 -FC_FOR_BUILD=f90 -CFLAGS_FOR_BUILD=-fPIC -CXXFLAGS_FOR_BUILD=-fPIC -""" - mpi_user_provided = """\ -MPICC=mpicc -MPICXX=mpicxx -MPIF77=mpif77 -MPIFC=mpif90 -MPI_CFLAGS=-fPIC -MPI_CXXFLAGS=-fPIC -""" - - def install(self, spec, prefix): - # Use a custom compiler configuration, otherwise the score-p - # build system messes with spack's compiler settings. - # Create these three files in the build directory - with open("platform-backend-user-provided", "w") as backend_file: - backend_file.write(self.backend_user_provided) - with open("platform-frontend-user-provided", "w") as frontend_file: - frontend_file.write(self.frontend_user_provided) - with open("platform-mpi-user-provided", "w") as mpi_file: - mpi_file.write(self.mpi_user_provided) - - configure_args = ["--prefix=%s" % prefix, - "--with-custom-compilers", - "--with-otf2=%s" % spec['otf2'].prefix.bin, - "--with-opari2=%s" % spec['opari2'].prefix.bin, - "--with-cube=%s" % spec['cube'].prefix.bin, - "--with-papi-header=%s" % spec['papi'].prefix.include, - "--with-papi-lib=%s" % spec['papi'].prefix.lib, - "--enable-shared"] - - configure(*configure_args) - - make() - make("install") diff --git a/var/spack/packages/scotch/package.py b/var/spack/packages/scotch/package.py deleted file mode 100644 index 79289ff2ad..0000000000 --- a/var/spack/packages/scotch/package.py +++ /dev/null @@ -1,40 +0,0 @@ -from spack import * -import glob -import os - -class Scotch(Package): - """Scotch is a software package for graph and mesh/hypergraph - partitioning, graph clustering, and sparse matrix ordering.""" - homepage = "http://www.labri.fr/perso/pelegrin/scotch/" - url = "http://gforge.inria.fr/frs/download.php/file/34099/scotch_6.0.3.tar.gz" - list_url = "http://gforge.inria.fr/frs/?group_id=248" - - version('6.0.3', '10b0cc0f184de2de99859eafaca83cfc') - - depends_on('mpi') - - - def patch(self): - with working_dir('src/Make.inc'): - makefiles = glob.glob('Makefile.inc.x86-64_pc_linux2*') - filter_file(r'^CCS\s*=.*$', 'CCS = cc', *makefiles) - filter_file(r'^CCD\s*=.*$', 'CCD = cc', *makefiles) - - - def install(self, spec, prefix): - # Currently support gcc and icc on x86_64 (maybe others with - # vanilla makefile) - makefile = 'Make.inc/Makefile.inc.x86-64_pc_linux2' - if spec.satisfies('%icc'): - makefile += '.icc' - - with working_dir('src'): - force_symlink(makefile, 'Makefile.inc') - for app in ('scotch', 'ptscotch'): - make(app) - - install_tree('bin', prefix.bin) - install_tree('lib', prefix.lib) - install_tree('include', prefix.include) - install_tree('man/man1', prefix.share_man1) - diff --git a/var/spack/packages/scr/package.py b/var/spack/packages/scr/package.py deleted file mode 100644 index 9fb758f072..0000000000 --- a/var/spack/packages/scr/package.py +++ /dev/null @@ -1,44 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Scr(Package): - """SCR caches checkpoint data in storage on the compute nodes of a - Linux cluster to provide a fast, scalable checkpoint/restart - capability for MPI codes""" - - homepage = "https://computation.llnl.gov/project/scr/" - - depends_on("mpi") -# depends_on("dtcmp") - - version('1.1-7', 'a5930e9ab27d1b7049447c2fd7734ebd', url='http://downloads.sourceforge.net/project/scalablecr/releases/scr-1.1-7.tar.gz') - version('1.1.8', '6a0f11ad18e27fcfc00a271ff587b06e', url='https://github.com/hpc/scr/releases/download/v1.1.8/scr-1.1.8.tar.gz') - - def install(self, spec, prefix): - configure("--prefix=" + prefix, - "--with-scr-config-file=" + prefix + "/etc/scr.conf") - make() - make("install") diff --git a/var/spack/packages/silo/package.py b/var/spack/packages/silo/package.py deleted file mode 100644 index 9eda11df15..0000000000 --- a/var/spack/packages/silo/package.py +++ /dev/null @@ -1,19 +0,0 @@ -from spack import * - -class Silo(Package): - """Silo is a library for reading and writing a wide variety of scientific data to binary, disk files.""" - - homepage = "http://wci.llnl.gov/simulation/computer-codes/silo" - url = "https://wci.llnl.gov/content/assets/docs/simulation/computer-codes/silo/silo-4.8/silo-4.8.tar.gz" - - #version('4.9', 'a83eda4f06761a86726e918fc55e782a') - version('4.8', 'b1cbc0e7ec435eb656dc4b53a23663c9') - - depends_on("hdf5@:1.8.12") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--with-hdf5=%s" %spec['hdf5'].prefix) - - make() - make("install") diff --git a/var/spack/packages/snappy/package.py b/var/spack/packages/snappy/package.py deleted file mode 100644 index c8f9ceef7d..0000000000 --- a/var/spack/packages/snappy/package.py +++ /dev/null @@ -1,15 +0,0 @@ -import os -from spack import * - -class Snappy(Package): - """A fast compressor/decompressor: https://code.google.com/p/snappy""" - - homepage = "https://code.google.com/p/snappy" - url = "https://github.com/google/snappy/releases/download/1.1.3/snappy-1.1.3.tar.gz" - - version('1.1.3', '7358c82f133dc77798e4c2062a749b73') - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/spindle/package.py b/var/spack/packages/spindle/package.py deleted file mode 100644 index 06a1e14284..0000000000 --- a/var/spack/packages/spindle/package.py +++ /dev/null @@ -1,44 +0,0 @@ -############################################################################## -# Copyright (c) 2014, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Matthew LeGendre, legendre1@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Spindle(Package): - """Spindle improves the library-loading performance of dynamically - linked HPC applications. Without Spindle large MPI jobs can - overload on a shared file system when loading dynamically - linked libraries, causing site-wide performance problems. - """ - homepage = "https://computation.llnl.gov/project/spindle/" - url = "https://github.com/hpc/Spindle/archive/v0.8.1.tar.gz" - list_url = "https://github.com/hpc/Spindle/releases" - - version('0.8.1', 'f11793a6b9d8df2cd231fccb2857d912') - - depends_on("launchmon") - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/sqlite/package.py b/var/spack/packages/sqlite/package.py deleted file mode 100644 index 734b0b6cb6..0000000000 --- a/var/spack/packages/sqlite/package.py +++ /dev/null @@ -1,40 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Sqlite(Package): - """SQLite3 is an SQL database engine in a C library. Programs that - link the SQLite3 library can have SQL database access without - running a separate RDBMS process. - """ - homepage = "www.sqlite.org" - - version('3.8.5', '0544ef6d7afd8ca797935ccc2685a9ed', - url='http://www.sqlite.org/2014/sqlite-autoconf-3080500.tar.gz') - - def install(self, spec, prefix): - configure("--prefix=" + prefix) - make() - make("install") diff --git a/var/spack/packages/stat/configure_mpicxx.patch b/var/spack/packages/stat/configure_mpicxx.patch deleted file mode 100644 index e09056d95c..0000000000 --- a/var/spack/packages/stat/configure_mpicxx.patch +++ /dev/null @@ -1,19 +0,0 @@ -commit 07ab6e565f939c54fff6580fc8463ea61662871a -Author: Gregory L. Lee <lee218@llnl.gov> -Date: Tue May 20 14:53:35 2014 -0700 - - re-boostrap to update configure - -diff --git a/configure b/configure -index 6c4af7d..30901ea 100755 ---- a/configure -+++ b/configure -@@ -15529,7 +15529,7 @@ fi - done - test -n "$MPICC" || MPICC="$CC" - -- for ac_prog in mpig++ mpiicpc mpxlC mpixlC -+ for ac_prog in mpig++ mpiCC mpicxx mpiicpc mpxlC mpixlC - do - # Extract the first word of "$ac_prog", so it can be a program name with args. - set dummy $ac_prog; ac_word=$2 diff --git a/var/spack/packages/stat/package.py b/var/spack/packages/stat/package.py deleted file mode 100644 index 5d81e62731..0000000000 --- a/var/spack/packages/stat/package.py +++ /dev/null @@ -1,40 +0,0 @@ -from spack import * - -class Stat(Package): - """Library to create, manipulate, and export graphs Graphlib.""" - homepage = "http://paradyn.org/STAT/STAT.html" - url = "https://github.com/lee218llnl/stat/archive/v2.0.0.tar.gz" - - version('2.2.0', '26bd69dd57a15afdd5d0ebdb0b7fb6fc') - version('2.1.0', 'ece26beaf057aa9134d62adcdda1ba91') - version('2.0.0', 'c7494210b0ba26b577171b92838e1a9b') - - variant('dysect', default=False, description="enable DySectAPI") - - depends_on('libelf') - depends_on('libdwarf') - depends_on('dyninst') - depends_on('graphlib') - depends_on('graphviz') - depends_on('launchmon') - depends_on('mrnet') - - patch('configure_mpicxx.patch', when='@2.1.0') - - def install(self, spec, prefix): - configure_args = [ - "--enable-gui", - "--prefix=%s" % prefix, - "--disable-examples", # Examples require MPI: avoid this dependency. - "--with-launchmon=%s" % spec['launchmon'].prefix, - "--with-mrnet=%s" % spec['mrnet'].prefix, - "--with-graphlib=%s" % spec['graphlib'].prefix, - "--with-stackwalker=%s" % spec['dyninst'].prefix, - "--with-libdwarf=%s" % spec['libdwarf'].prefix - ] - if '+dysect' in spec: - configure_args.append('--enable-dysectapi') - configure(*configure_args) - - make(parallel=False) - make("install") diff --git a/var/spack/packages/sundials/package.py b/var/spack/packages/sundials/package.py deleted file mode 100644 index 8b784c8c3c..0000000000 --- a/var/spack/packages/sundials/package.py +++ /dev/null @@ -1,39 +0,0 @@ -############################################################################## -# Copyright (c) 2013, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Sundials(Package): - """SUNDIALS (SUite of Nonlinear and DIfferential/ALgebraic equation Solvers)""" - homepage = "http://computation.llnl.gov/casc/sundials/" - url = "http://computation.llnl.gov/casc/sundials/download/code/sundials-2.5.0.tar.gz" - - version('2.5.0', 'aba8b56eec600de3109cfb967aa3ba0f') - - depends_on("mpi") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/swig/package.py b/var/spack/packages/swig/package.py deleted file mode 100644 index ee536d7063..0000000000 --- a/var/spack/packages/swig/package.py +++ /dev/null @@ -1,46 +0,0 @@ -############################################################################## -# Copyright (c) 2014, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. -# -# This file is part of Spack. -# Written by Matthew LeGendre, legendre1@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://scalability-llnl.github.io/spack -# Please also see the LICENSE file for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU General Public License (as published by -# the Free Software Foundation) version 2.1 dated February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public License -# along with this program; if not, write to the Free Software Foundation, -# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## -from spack import * - -class Swig(Package): - """SWIG is an interface compiler that connects programs written in - C and C++ with scripting languages such as Perl, Python, Ruby, - and Tcl. It works by taking the declarations found in C/C++ - header files and using them to generate the wrapper code that - scripting languages need to access the underlying C/C++ - code. In addition, SWIG provides a variety of customization - features that let you tailor the wrapping process to suit your - application.""" - homepage = "http://www.swig.org" - url = "http://prdownloads.sourceforge.net/swig/swig-3.0.2.tar.gz" - - version('3.0.2', '62f9b0d010cef36a13a010dc530d0d41') - - depends_on('pcre') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/task/package.py b/var/spack/packages/task/package.py deleted file mode 100644 index 07f44cc45b..0000000000 --- a/var/spack/packages/task/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Task(Package): - """Feature-rich console based todo list manager""" - homepage = "http://www.taskwarrior.org" - url = "http://taskwarrior.org/download/task-2.4.4.tar.gz" - - version('2.4.4', '517450c4a23a5842df3e9905b38801b3') - - depends_on("gnutls") - depends_on("libuuid") - # depends_on("gcc@4.8:") - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('-DCMAKE_BUILD_TYPE=release', - '..', - *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/taskd/package.py b/var/spack/packages/taskd/package.py deleted file mode 100644 index 66bc0cb484..0000000000 --- a/var/spack/packages/taskd/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Taskd(Package): - """TaskWarrior task synchronization daemon""" - # FIXME: add a proper url for your package's homepage here. - homepage = "http://www.taskwarrior.org" - url = "http://taskwarrior.org/download/taskd-1.1.0.tar.gz" - - version('1.1.0', 'ac855828c16f199bdbc45fbc227388d0') - - depends_on("libuuid") - depends_on("gnutls") - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake('-DCMAKE_BUILD_TYPE=release', - '..', - *std_cmake_args) - make() - make("install") diff --git a/var/spack/packages/tau/package.py b/var/spack/packages/tau/package.py deleted file mode 100644 index 048fac80aa..0000000000 --- a/var/spack/packages/tau/package.py +++ /dev/null @@ -1,36 +0,0 @@ -from spack import * - -import os -from llnl.util.filesystem import join_path - -class Tau(Package): - """A portable profiling and tracing toolkit for performance - analysis of parallel programs written in Fortran, C, C++, UPC, - Java, Python.""" - homepage = "http://www.cs.uoregon.edu/research/tau" - url = "http://www.cs.uoregon.edu/research/paracomp/tau/tauprofile/dist/tau-2.23.1.tar.gz" - - version('2.23.1', '6593b47ae1e7a838e632652f0426fe72') - - def install(self, spec, prefix): - # TAU isn't happy with directories that have '@' in the path. Sigh. - change_sed_delimiter('@', ';', 'configure') - change_sed_delimiter('@', ';', 'utils/FixMakefile') - change_sed_delimiter('@', ';', 'utils/FixMakefile.sed.default') - - # After that, it's relatively standard. - configure("-prefix=%s" % prefix) - make("install") - - # Link arch-specific directories into prefix since there is - # only one arch per prefix the way spack installs. - self.link_tau_arch_dirs() - - - def link_tau_arch_dirs(self): - for subdir in os.listdir(self.prefix): - for d in ('bin', 'lib'): - src = join_path(self.prefix, subdir, d) - dest = join_path(self.prefix, d) - if os.path.isdir(src) and not os.path.exists(dest): - os.symlink(join_path(subdir, d), dest) diff --git a/var/spack/packages/tcl/package.py b/var/spack/packages/tcl/package.py deleted file mode 100644 index 529adf7788..0000000000 --- a/var/spack/packages/tcl/package.py +++ /dev/null @@ -1,22 +0,0 @@ -from spack import * - -class Tcl(Package): - """Tcl (Tool Command Language) is a very powerful but easy to - learn dynamic programming language, suitable for a very wide - range of uses, including web and desktop applications, - networking, administration, testing and many more. Open source - and business-friendly, Tcl is a mature yet evolving language - that is truly cross platform, easily deployed and highly - extensible.""" - homepage = "http://www.tcl.tk" - - version('8.6.3', 'db382feca91754b7f93da16dc4cdad1f', - url="http://prdownloads.sourceforge.net/tcl/tcl8.6.3-src.tar.gz") - - depends_on('zlib') - - def install(self, spec, prefix): - with working_dir('unix'): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/the_silver_searcher/package.py b/var/spack/packages/the_silver_searcher/package.py deleted file mode 100644 index e4020b6766..0000000000 --- a/var/spack/packages/the_silver_searcher/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class TheSilverSearcher(Package): - """Fast recursive grep alternative""" - homepage = "http://geoff.greer.fm/ag/" - url = "http://geoff.greer.fm/ag/releases/the_silver_searcher-0.30.0.tar.gz" - - version('0.30.0', '95e2e7859fab1156c835aff7413481db') - - depends_on('pcre') - depends_on('xz') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/thrift/package.py b/var/spack/packages/thrift/package.py deleted file mode 100644 index 0e15052f64..0000000000 --- a/var/spack/packages/thrift/package.py +++ /dev/null @@ -1,44 +0,0 @@ -from spack import * - -class Thrift(Package): - """The Apache Thrift software framework, for scalable cross-language services - development, combines a software stack with a code generation engine to build - services that work efficiently and seamlessly between C++, Java, Python, PHP, - Ruby, Erlang, Perl, Haskell, C#, Cocoa, JavaScript, Node.js, Smalltalk, OCaml - and Delphi and other languages.""" - - homepage = "http://thrift.apache.org" - url = "http://apache.mirrors.ionfish.org/thrift/0.9.2/thrift-0.9.2.tar.gz" - - version('0.9.2', '89f63cc4d0100912f4a1f8a9dee63678') - - extends("python") - - depends_on("autoconf") - depends_on("automake") - depends_on("bison") - depends_on("boost") - depends_on("flex") - depends_on("jdk") - depends_on("libtool") - depends_on("openssl") - depends_on("python") - - # Compilation fails for most languages, fortunately cpp installs fine - # All other languages (yes, including C) are omitted until someone needs them - def install(self, spec, prefix): - env["PY_PREFIX"] = prefix - env["JAVA_PREFIX"] = prefix - - configure("--prefix=%s" % prefix, - "--with-boost=%s" % spec['boost'].prefix, - "--with-c=no", - "--with-go=no", - "--with-python=yes", - "--with-lua=no", - "--with-php=no", - "--with-qt4=no", - "--enable-tests=no") - - make() - make("install") diff --git a/var/spack/packages/tk/package.py b/var/spack/packages/tk/package.py deleted file mode 100644 index 96736f6f95..0000000000 --- a/var/spack/packages/tk/package.py +++ /dev/null @@ -1,22 +0,0 @@ -from spack import * - -class Tk(Package): - """Tk is a graphical user interface toolkit that takes developing - desktop applications to a higher level than conventional - approaches. Tk is the standard GUI not only for Tcl, but for - many other dynamic languages, and can produce rich, native - applications that run unchanged across Windows, Mac OS X, Linux - and more.""" - homepage = "http://www.tcl.tk" - url = "http://prdownloads.sourceforge.net/tcl/tk8.6.3-src.tar.gz" - - version('src', '85ca4dbf4dcc19777fd456f6ee5d0221') - - depends_on("tcl") - - def install(self, spec, prefix): - with working_dir('unix'): - configure("--prefix=%s" % prefix, - "--with-tcl=%s" % spec['tcl'].prefix.lib) - make() - make("install") diff --git a/var/spack/packages/tmux/package.py b/var/spack/packages/tmux/package.py deleted file mode 100644 index 23d36db427..0000000000 --- a/var/spack/packages/tmux/package.py +++ /dev/null @@ -1,24 +0,0 @@ -from spack import * - -class Tmux(Package): - """tmux is a terminal multiplexer. What is a terminal multiplexer? It lets - you switch easily between several programs in one terminal, detach them (they - keep running in the background) and reattach them to a different terminal. And - do a lot more. - """ - - homepage = "http://tmux.sourceforge.net" - url = "http://downloads.sourceforge.net/project/tmux/tmux/tmux-1.9/tmux-1.9a.tar.gz" - - version('1.9a', 'b07601711f96f1d260b390513b509a2d') - - depends_on('libevent') - depends_on('ncurses') - - def install(self, spec, prefix): - configure( - "--prefix=%s" % prefix, - "PKG_CONFIG_PATH=%s:%s" % (spec['libevent'].prefix, spec['ncurses'].prefix)) - - make() - make("install") diff --git a/var/spack/packages/tmuxinator/package.py b/var/spack/packages/tmuxinator/package.py deleted file mode 100644 index 26c061cbd6..0000000000 --- a/var/spack/packages/tmuxinator/package.py +++ /dev/null @@ -1,17 +0,0 @@ -from spack import * - -class Tmuxinator(Package): - """A session configuration creator and manager for tmux""" - homepage = "https://github.com/tmuxinator/tmuxinator" - url = "https://github.com/tmuxinator/tmuxinator" - - version('0.6.11', - git='https://github.com/tmuxinator/tmuxinator', - tag='v0.6.11') - - extends('ruby') - - def install(self, spec, prefix): - gem('build', 'tmuxinator.gemspec') - gem('install', 'tmuxinator-{}.gem'.format(self.version)) - diff --git a/var/spack/packages/trilinos/package.py b/var/spack/packages/trilinos/package.py deleted file mode 100644 index 7c43f796a4..0000000000 --- a/var/spack/packages/trilinos/package.py +++ /dev/null @@ -1,50 +0,0 @@ -from spack import * - - -class Trilinos(Package): - """ - The Trilinos Project is an effort to develop algorithms and enabling technologies within an object-oriented - software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. - A unique design feature of Trilinos is its focus on packages. - """ - homepage = "https://trilinos.org/" - url = "http://trilinos.csbsju.edu/download/files/trilinos-12.2.1-Source.tar.gz" - - version('12.2.1', '6161926ea247863c690e927687f83be9') - version('12.0.1', 'bd99741d047471e127b8296b2ec08017') - version('11.14.3', '2f4f83f8333e4233c57d0f01c4b57426') - version('11.14.2', 'a43590cf896c677890d75bfe75bc6254') - version('11.14.1', '40febc57f76668be8b6a77b7607bb67f') - - variant('mpi', default=True, description='Add a dependency on MPI and enables MPI dependent packages') - - # Everything should be compiled with -fpic - depends_on('blas') - depends_on('lapack') - depends_on('boost') - depends_on('netcdf') - depends_on('matio') - depends_on('glm') - depends_on('swig') - depends_on('mpi', when='+mpi') - - def install(self, spec, prefix): - - options = [ - '-DTrilinos_ENABLE_ALL_PACKAGES:BOOL=ON', - '-DTrilinos_ENABLE_TESTS:BOOL=OFF', - '-DTrilinos_ENABLE_EXAMPLES:BOOL=OFF', - '-DBUILD_SHARED_LIBS:BOOL=ON', - '-DBLAS_LIBRARY_DIRS:PATH=%s' % spec['blas'].prefix, - '-DLAPACK_LIBRARY_DIRS:PATH=%s' % spec['lapack'].prefix - ] - if '+mpi' in spec: - mpi_options = ['-DTPL_ENABLE_MPI:BOOL=ON'] - options.extend(mpi_options) - - # -DCMAKE_INSTALL_PREFIX and all the likes... - options.extend(std_cmake_args) - with working_dir('spack-build', create=True): - cmake('..', *options) - make() - make('install') diff --git a/var/spack/packages/uncrustify/package.py b/var/spack/packages/uncrustify/package.py deleted file mode 100644 index d3f2d1b473..0000000000 --- a/var/spack/packages/uncrustify/package.py +++ /dev/null @@ -1,14 +0,0 @@ -from spack import * - -class Uncrustify(Package): - """Source Code Beautifier for C, C++, C#, ObjectiveC, D, Java, Pawn and VALA""" - - homepage = "http://uncrustify.sourceforge.net/" - url = "http://downloads.sourceforge.net/project/uncrustify/uncrustify/uncrustify-0.61/uncrustify-0.61.tar.gz" - - version('0.61', 'b6140106e74c64e831d0b1c4b6cf7727') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/util-linux/package.py b/var/spack/packages/util-linux/package.py deleted file mode 100644 index cb7ceabf57..0000000000 --- a/var/spack/packages/util-linux/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * -import os - -class UtilLinux(Package): - """Util-linux is a suite of essential utilities for any Linux system.""" - - homepage = "http://freecode.com/projects/util-linux" - url = "https://www.kernel.org/pub/linux/utils/util-linux/v2.25/util-linux-2.25.tar.gz" - - version('2.25', 'f6d7fc6952ec69c4dc62c8d7c59c1d57') - - depends_on("python@2.7:") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "PKG_CONFIG_PATH=%s/pkgconfig" % spec['python'].prefix.lib, - "--disable-use-tty-group") - - make() - make("install") diff --git a/var/spack/packages/vim/package.py b/var/spack/packages/vim/package.py deleted file mode 100644 index 4099b3257f..0000000000 --- a/var/spack/packages/vim/package.py +++ /dev/null @@ -1,83 +0,0 @@ -from spack import * - -class Vim(Package): - """Vim is a highly configurable text editor built to enable efficient text - editing. It is an improved version of the vi editor distributed with most - UNIX systems. Vim is often called a "programmer's editor," and so useful - for programming that many consider it an entire IDE. It's not just for - programmers, though. Vim is perfect for all kinds of text editing, from - composing email to editing configuration files. - """ - - homepage = "http://www.vim.org" - url = "ftp://ftp.vim.org/pub/vim/unix/vim-7.4.tar.bz2" - list_url = "http://ftp.vim.org/pub/vim/unix/" - - version('7.4', '607e135c559be642f210094ad023dc65') - version('7.3', '5b9510a17074e2b37d8bb38ae09edbf2') - version('7.2', 'f0901284b338e448bfd79ccca0041254') - version('7.1', '44c6b4914f38d6f9aa959640b89da329') - version('7.0', '4ca69757678272f718b1041c810d82d8') - version('6.4', '774c14d93ce58674b3b2c880edd12d77') - version('6.3', '821fda8f14d674346b87e3ef9cb96389') - version('6.2', 'c49d360bbd069d00e2a57804f2a123d9') - version('6.1.405', 'd220ff58f2c72ed606e6d0297c2f2a7c') - version('6.1', '7fd0f915adc7c0dab89772884268b030') - version('6.0', '9d9ca84d489af6b3f54639dd97af3774') - - feature_sets = ('huge', 'big', 'normal', 'small', 'tiny') - for fs in feature_sets: - variant(fs, default=False, description="Use '%s' feature set" % fs) - - variant('python', default=False, description="build with Python") - depends_on('python', when='+python') - - variant('ruby', default=False, description="build with Ruby") - depends_on('ruby', when='+ruby') - - variant('cscope', default=False, description="build with cscope support") - depends_on('cscope', when='+cscope') - - variant('gui', default=False, description="build with gui (gvim)") - # virtual dependency? - - def install(self, spec, prefix): - feature_set = None - for fs in self.feature_sets: - if "+" + fs in spec: - if feature_set is not None: - tty.error("Only one feature set allowed, both %s and %s specified" - % (feature_set, fs)) - feature_set = fs - if '+gui' in spec: - if feature_set is not None: - if feature_set is not 'huge': - tty.error("+gui variant requires 'huge' feature set, %s was specified" - % feature_set) - feature_set = 'huge' - if feature_set is None: - feature_set = 'normal' - - configure_args = [] - configure_args.append("--with-features=" + feature_set) - - if '+python' in spec: - configure_args.append("--enable-pythoninterp=yes") - else: - configure_args.append("--enable-pythoninterp=dynamic") - - if '+ruby' in spec: - configure_args.append("--enable-rubyinterp=yes") - else: - configure_args.append("--enable-rubyinterp=dynamic") - - if '+gui' in spec: - configure_args.append("--enable-gui=auto") - - if '+cscope' in spec: - configure_args.append("--enable-cscope") - - configure("--prefix=%s" % prefix, *configure_args) - - make() - make("install") diff --git a/var/spack/packages/vtk/package.py b/var/spack/packages/vtk/package.py deleted file mode 100644 index 4a27a8fedb..0000000000 --- a/var/spack/packages/vtk/package.py +++ /dev/null @@ -1,40 +0,0 @@ -from spack import * - -class Vtk(Package): - """The Visualization Toolkit (VTK) is an open-source, freely - available software system for 3D computer graphics, image - processing and visualization. """ - homepage = "http://www.vtk.org" - url = "http://www.vtk.org/files/release/6.1/VTK-6.1.0.tar.gz" - - version('6.1.0', '25e4dfb3bad778722dcaec80cd5dab7d') - - depends_on("qt") - - def install(self, spec, prefix): - with working_dir('spack-build', create=True): - cmake_args = [ - "..", - "-DBUILD_SHARED_LIBS=ON", - # Disable wrappers for other languages. - "-DVTK_WRAP_PYTHON=OFF", - "-DVTK_WRAP_JAVA=OFF", - "-DVTK_WRAP_TCL=OFF"] - cmake_args.extend(std_cmake_args) - - # Enable Qt support here. - cmake_args.extend([ - "-DQT_QMAKE_EXECUTABLE:PATH=%s/qmake" % spec['qt'].prefix.bin, - "-DVTK_Group_Qt:BOOL=ON", - # Ignore webkit because it's hard to build w/Qt - "-DVTK_Group_Qt=OFF", - "-DModule_vtkGUISupportQt:BOOL=ON", - "-DModule_vtkGUISupportQtOpenGL:BOOL=ON" - ]) - - if spec['qt'].satisfies('@5'): - cmake_args.append("-DVTK_QT_VERSION:STRING=5") - - cmake(*cmake_args) - make() - make("install") diff --git a/var/spack/packages/wget/package.py b/var/spack/packages/wget/package.py deleted file mode 100644 index c8fd025122..0000000000 --- a/var/spack/packages/wget/package.py +++ /dev/null @@ -1,21 +0,0 @@ -from spack import * - -class Wget(Package): - """GNU Wget is a free software package for retrieving files using - HTTP, HTTPS and FTP, the most widely-used Internet protocols. It - is a non-interactive commandline tool, so it may easily be called - from scripts, cron jobs, terminals without X-Windows support, - etc.""" - - homepage = "http://www.gnu.org/software/wget/" - url = "http://ftp.gnu.org/gnu/wget/wget-1.16.tar.xz" - - version('1.16', 'fe102975ab3a6c049777883f1bb9ad07') - - depends_on("openssl") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, - "--with-ssl=openssl") - make() - make("install") diff --git a/var/spack/packages/wx/package.py b/var/spack/packages/wx/package.py deleted file mode 100644 index 1813a8c8a5..0000000000 --- a/var/spack/packages/wx/package.py +++ /dev/null @@ -1,24 +0,0 @@ -from spack import * - -class Wx(Package): - """wxWidgets is a C++ library that lets developers create - applications for Windows, Mac OS X, Linux and other platforms - with a single code base. It has popular language bindings for - Python, Perl, Ruby and many other languages, and unlike other - cross-platform toolkits, wxWidgets gives applications a truly - native look and feel because it uses the platform's native API - rather than emulating the GUI. It's also extensive, free, - open-source and mature.""" - homepage = "http://www.wxwidgets.org/" - - version('2.8.12', '2fa39da14bc06ea86fe902579fedc5b1', - url="https://sourceforge.net/projects/wxwindows/files/2.8.12/wxWidgets-2.8.12.tar.gz") - version('3.0.1', 'dad1f1cd9d4c370cbc22700dc492da31', - url="https://sourceforge.net/projects/wxwindows/files/3.0.1/wxWidgets-3.0.1.tar.bz2") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, "--enable-unicode", "--disable-precomp-headers") - - make(parallel=False) - make("install") - diff --git a/var/spack/packages/wxpropgrid/package.py b/var/spack/packages/wxpropgrid/package.py deleted file mode 100644 index 790cead517..0000000000 --- a/var/spack/packages/wxpropgrid/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Wxpropgrid(Package): - """wxPropertyGrid is a property sheet control for wxWidgets. In - other words, it is a specialized two-column grid for editing - properties such as strings, numbers, flagsets, string arrays, - and colours.""" - homepage = "http://wxpropgrid.sourceforge.net/" - url = "http://prdownloads.sourceforge.net/wxpropgrid/wxpropgrid-1.4.15-src.tar.gz" - - version('1.4.15', 'f44b5cd6fd60718bacfabbf7994f1e93') - - depends_on("wx") - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix, "--with-wxdir=%s" % spec['wx'].prefix.bin, "--enable-unicode") - - make() - make("install") - diff --git a/var/spack/packages/xcb-proto/package.py b/var/spack/packages/xcb-proto/package.py deleted file mode 100644 index 17a94bd892..0000000000 --- a/var/spack/packages/xcb-proto/package.py +++ /dev/null @@ -1,15 +0,0 @@ -from spack import * - -class XcbProto(Package): - """Protocol for libxcb""" - - homepage = "http://xcb.freedesktop.org/" - url = "http://xcb.freedesktop.org/dist/xcb-proto-1.11.tar.gz" - - version('1.11', 'c8c6cb72c84f58270f4db1f39607f66a') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/xz/package.py b/var/spack/packages/xz/package.py deleted file mode 100644 index ba6c9733a7..0000000000 --- a/var/spack/packages/xz/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Xz(Package): - """XZ Utils is free general-purpose data compression software with - high compression ratio. XZ Utils were written for POSIX-like - systems, but also work on some not-so-POSIX systems. XZ Utils are - the successor to LZMA Utils.""" - homepage = "http://tukaani.org/xz/" - url = "http://tukaani.org/xz/xz-5.2.0.tar.bz2" - - version('5.2.0', '867cc8611760240ebf3440bd6e170bb9', - url = 'http://tukaani.org/xz/xz-5.2.0.tar.bz2') - version('5.2.2', 'f90c9a0c8b259aee2234c4e0d7fd70af', - url = 'http://tukaani.org/xz/xz-5.2.2.tar.bz2') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") - diff --git a/var/spack/packages/yasm/package.py b/var/spack/packages/yasm/package.py deleted file mode 100644 index d3a695b16d..0000000000 --- a/var/spack/packages/yasm/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Yasm(Package): - """Yasm is a complete rewrite of the NASM-2.11.06 assembler. It - supports the x86 and AMD64 instruction sets, accepts NASM and - GAS assembler syntaxes and outputs binary, ELF32 and ELF64 - object formats.""" - homepage = "http://yasm.tortall.net" - url = "http://www.tortall.net/projects/yasm/releases/yasm-1.3.0.tar.gz" - - version('1.3.0', 'fc9e586751ff789b34b1f21d572d96af') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - make() - make("install") diff --git a/var/spack/packages/zeromq/package.py b/var/spack/packages/zeromq/package.py deleted file mode 100644 index b5a1e3d4cd..0000000000 --- a/var/spack/packages/zeromq/package.py +++ /dev/null @@ -1,20 +0,0 @@ -from spack import * - -class Zeromq(Package): - """ The ZMQ networking/concurrency library and core API """ - homepage = "http://zguide.zeromq.org/" - url = "http://download.zeromq.org/zeromq-4.1.2.tar.gz" - - version('4.1.2', '159c0c56a895472f02668e692d122685') - version('4.1.1', '0a4b44aa085644f25c177f79dc13f253') - version('4.0.7', '9b46f7e7b0704b83638ef0d461fd59ab') - version('4.0.6', 'd47dd09ed7ae6e7fd6f9a816d7f5fdf6') - version('4.0.5', '73c39f5eb01b9d7eaf74a5d899f1d03d') - - depends_on("libsodium") - - def install(self, spec, prefix): - configure("--with-libsodium","--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/zlib/package.py b/var/spack/packages/zlib/package.py deleted file mode 100644 index 2770f781ac..0000000000 --- a/var/spack/packages/zlib/package.py +++ /dev/null @@ -1,18 +0,0 @@ -from spack import * - -class Zlib(Package): - """zlib is designed to be a free, general-purpose, legally unencumbered -- - that is, not covered by any patents -- lossless data-compression library for - use on virtually any computer hardware and operating system. - """ - - homepage = "http://zlib.net" - url = "http://zlib.net/zlib-1.2.8.tar.gz" - - version('1.2.8', '44d667c142d7cda120332623eab69f40') - - def install(self, spec, prefix): - configure("--prefix=%s" % prefix) - - make() - make("install") diff --git a/var/spack/packages/zsh/package.py b/var/spack/packages/zsh/package.py deleted file mode 100644 index 99ef9de2e5..0000000000 --- a/var/spack/packages/zsh/package.py +++ /dev/null @@ -1,16 +0,0 @@ -from spack import * - -class Zsh(Package): - """ The ZSH shell """ - homepage = "http://www.zsh.org" - url = "http://www.zsh.org/pub/zsh-5.0.8.tar.bz2" - - version('5.0.8', 'e6759e8dd7b714d624feffd0a73ba0fe') - - depends_on("pcre") - - def install(self, spec, prefix): - configure('--prefix=%s' % prefix) - - make() - make("install") |