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| author | Adam J. Stewart <ajstewart426@gmail.com> | 2019-10-28 20:27:54 -0500 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2019-10-28 20:27:54 -0500 |
| commit | 2264e30d99d8b9fbdec8fa69b594e53d8ced15a1 (patch) | |
| tree | b361d4d420ab2668be84cf27efb808d364a2abc1 /var/spack/repos/builtin/packages/augustus/package.py | |
| parent | 4367e16740ccd39515ad75e86cce9f65ac46ca69 (diff) | |
| download | spack-2264e30d99d8b9fbdec8fa69b594e53d8ced15a1.tar.gz spack-2264e30d99d8b9fbdec8fa69b594e53d8ced15a1.tar.bz2 spack-2264e30d99d8b9fbdec8fa69b594e53d8ced15a1.tar.xz spack-2264e30d99d8b9fbdec8fa69b594e53d8ced15a1.zip | |
Update URL parsing regexes and tests (#13411)
* Update URL parsing regexes and tests
* Get rid of no longer used README
* Merge py-udunits and py-cf-units
* netcdf -> netcdf-c
* setup_environment -> setup_*_environment
* Fix doc tests
* Few last minute fixes
* Simplify prefix removal copypasta
Diffstat (limited to 'var/spack/repos/builtin/packages/augustus/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/augustus/package.py | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/var/spack/repos/builtin/packages/augustus/package.py b/var/spack/repos/builtin/packages/augustus/package.py index 18b30d29d4..c909ce102a 100644 --- a/var/spack/repos/builtin/packages/augustus/package.py +++ b/var/spack/repos/builtin/packages/augustus/package.py @@ -16,7 +16,7 @@ class Augustus(MakefilePackage): # Releases have moved to github version('3.3.2', sha256='d09f972cfd88deb34b19b69878eb8af3bbbe4f1cde1434b69cedc2aa6247a0f2') - version('3.3.1', sha256='011379606f381ee21b9716f83e8a1a57b2aaa01aefeebd2748104efa08c47cab', + version('3.3.1-tag1', sha256='011379606f381ee21b9716f83e8a1a57b2aaa01aefeebd2748104efa08c47cab', url='https://github.com/Gaius-Augustus/Augustus/archive/v3.3.1-tag1.tar.gz') version('3.3', sha256='b5eb811a4c33a2cc3bbd16355e19d530eeac6d1ac923e59f48d7a79f396234ee', url='http://bioinf.uni-greifswald.de/augustus/binaries/old/augustus-3.3.tar.gz') @@ -98,7 +98,7 @@ class Augustus(MakefilePackage): for file in files: filter_file(pattern, repl, *files, backup=False) - def setup_environment(self, spack_env, run_env): - run_env.set('AUGUSTUS_CONFIG_PATH', join_path( + def setup_run_environment(self, env): + env.set('AUGUSTUS_CONFIG_PATH', join_path( self.prefix, 'config')) - run_env.prepend_path('PATH', join_path(self.prefix, 'scripts')) + env.prepend_path('PATH', join_path(self.prefix, 'scripts')) |