mpiblast: new package (#5106)

1 files changed, 51 insertions, 0 deletions

diff --git a/var/spack/repos/builtin/packages/mpiblast/package.py b/var/spack/repos/builtin/packages/mpiblast/package.py
new file mode 100644
index 0000000000..c5e283dbcf
--- /dev/null
+++ b/var/spack/repos/builtin/packages/mpiblast/package.py
@@ -0,0 +1,51 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class Mpiblast(AutotoolsPackage):
+    """mpiBLAST is a freely available, open-source, parallel implementation of
+       NCBI BLAST"""
+
+    homepage = "http://www.mpiblast.org/"
+    url      = "http://www.mpiblast.org/downloads/files/mpiBLAST-1.6.0.tgz"
+
+    version('1.6.0', '707105ccd56825db776b50bfd81cecd5')
+
+    patch('mpiBLAST-1.6.0-patch-110806')
+
+    depends_on('mpi')
+
+    def configure_args(self):
+        args = ['--with-mpi=%s' % self.spec['mpi'].prefix]
+        return args
+
+    def build(self, spec, prefix):
+        make('ncbi')
+        make()
+
+    def setup_environment(self, spack_env, run_env):
+        spack_env.set('ac_cv_path_CC', self.spec['mpi'].mpicc)
+        spack_env.set('ac_cv_path_CXX', self.spec['mpi'].mpicxx)