New package - RStan

This PR creates the RStan package and its dependencies.

1 files changed, 54 insertions, 0 deletions

diff --git a/var/spack/repos/builtin/packages/r-ggplot2/package.py b/var/spack/repos/builtin/packages/r-ggplot2/package.py
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+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RGgplot2(Package):
+    """An implementation of the grammar of graphics in R. It combines the
+    advantages of both base and lattice graphics: conditioning and shared axes
+    are handled automatically, and you can still build up a plot step by step
+    from multiple data sources. It also implements a sophisticated
+    multidimensional conditioning system and a consistent interface to map data
+    to aesthetic attributes. See http://ggplot2.org for more information,
+    documentation and examples."""
+
+    homepage = "http://ggplot2.org/"
+    url      = "https://cran.r-project.org/src/contrib/ggplot2_2.1.0.tar.gz"
+    list_url = "https://cran.r-project.org/src/contrib/Archive/ggplot2"
+
+    version('2.1.0', '771928cfb97c649c720423deb3ec7fd3')
+
+    extends('R')
+
+    depends_on('r-digest')
+    depends_on('r-gtable')
+    depends_on('r-mass')
+    depends_on('r-plyr')
+    depends_on('r-reshape2')
+    depends_on('r-scales')
+
+    def install(self, spec, prefix):
+        R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+          self.stage.source_path)