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author | lingnanyuan <1297162327@qq.com> | 2017-11-03 15:17:58 -0500 |
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committer | Christoph Junghans <christoph.junghans@gmail.com> | 2017-11-03 14:17:58 -0600 |
commit | 64689bdb01d1bb37ebcd86b773e1c039bfeac607 (patch) | |
tree | 3e31d7813de6fa8cbdbae41524368dad111856c9 /var/spack/repos/builtin/packages/r-makecdfenv/package.py | |
parent | b614c7970b606eda50889099e9f52046c4421704 (diff) | |
download | spack-64689bdb01d1bb37ebcd86b773e1c039bfeac607.tar.gz spack-64689bdb01d1bb37ebcd86b773e1c039bfeac607.tar.bz2 spack-64689bdb01d1bb37ebcd86b773e1c039bfeac607.tar.xz spack-64689bdb01d1bb37ebcd86b773e1c039bfeac607.zip |
r-makecdfenv: Create new package. (#6114)
Diffstat (limited to 'var/spack/repos/builtin/packages/r-makecdfenv/package.py')
-rw-r--r-- | var/spack/repos/builtin/packages/r-makecdfenv/package.py | 44 |
1 files changed, 44 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-makecdfenv/package.py b/var/spack/repos/builtin/packages/r-makecdfenv/package.py new file mode 100644 index 0000000000..1c81d4ef84 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-makecdfenv/package.py @@ -0,0 +1,44 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RMakecdfenv(RPackage): + """This package has two functions. One reads a Affymetrix + chip description file (CDF) and creates a hash table environment + containing the location/probe set membership mapping. + The other creates a package that automatically loads + that environment.""" + + homepage = "https://www.bioconductor.org/packages/makecdfenv/" + url = "https://git.bioconductor.org/packages/makecdfenv" + + version('1.52.0', git='https://git.bioconductor.org/packages/makecdfenv', commit='b88a3e93e3b7feeeca69eda7c1fc5a0826c81120') + + depends_on('r@3.4.0:3.4.9', when='@1.52.0') + depends_on('r-affyio', type=('build', 'run')) + depends_on('r-biobase', type=('build', 'run')) + depends_on('r-affy', type=('build', 'run')) + depends_on('r-zlibbioc', type=('build', 'run')) |