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authorGlenn Johnson <glenn-johnson@uiowa.edu>2016-07-11 14:50:33 -0500
committerGlenn Johnson <glenn-johnson@uiowa.edu>2016-07-11 14:50:33 -0500
commit11960e53ef827edaa4d007d765952e9bbb0f2e98 (patch)
tree86152ee253a88e40cdf9bb51f4b0cd6d3d3e782b /var
parent255d05a9c123a6632c0ab496f2bde31a2917fdf4 (diff)
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New package - r-dplyr
This brings in dplyr and dependencies.
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/r-assertthat/package.py43
-rw-r--r--var/spack/repos/builtin/packages/r-dplyr/package.py50
-rw-r--r--var/spack/repos/builtin/packages/r-lazyeval/package.py43
-rw-r--r--var/spack/repos/builtin/packages/r-tibble/package.py46
4 files changed, 182 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-assertthat/package.py b/var/spack/repos/builtin/packages/r-assertthat/package.py
new file mode 100644
index 0000000000..4070b6fe8d
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-assertthat/package.py
@@ -0,0 +1,43 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RAssertthat(Package):
+ """assertthat is an extension to stopifnot() that makes it easy to declare
+ the pre and post conditions that you code should satisfy, while also
+ producing friendly error messages so that your users know what they've done
+ wrong."""
+
+ homepage = "https://cran.r-project.org/web/packages/assertthat/index.html"
+ url = "https://cran.r-project.org/src/contrib/assertthat_0.1.tar.gz"
+
+ version('0.1', '59f9d7f7c00077ea54d763b78eeb5798')
+
+ extends('R')
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)
diff --git a/var/spack/repos/builtin/packages/r-dplyr/package.py b/var/spack/repos/builtin/packages/r-dplyr/package.py
new file mode 100644
index 0000000000..b065e0b817
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-dplyr/package.py
@@ -0,0 +1,50 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RDplyr(Package):
+ """A fast, consistent tool for working with data frame like objects, both
+ in memory and out of memory."""
+
+ homepage = "https://github.com/hadley/dplyr"
+ url = "https://cran.r-project.org/src/contrib/dplyr_0.5.0.tar.gz"
+ list_url = "https://cran.r-project.org/src/contrib/Archive/dplyr"
+
+ version('0.5.0', '1fcafcacca70806eea2e6d465cdb94ef')
+
+ extends('R')
+ depends_on('r-assertthat')
+ depends_on('r-R6')
+ depends_on('r-rcpp')
+ depends_on('r-tibble')
+ depends_on('r-magrittr')
+ depends_on('r-lazyeval')
+ depends_on('r-dbi')
+ depends_on('r-bh')
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)
diff --git a/var/spack/repos/builtin/packages/r-lazyeval/package.py b/var/spack/repos/builtin/packages/r-lazyeval/package.py
new file mode 100644
index 0000000000..f80fb4d272
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-lazyeval/package.py
@@ -0,0 +1,43 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RLazyeval(Package):
+ """An alternative approach to non-standard evaluation using formulas.
+ Provides a full implementation of LISP style 'quasiquotation', making it
+ easier to generate code with other code."""
+
+ homepage = "https://cran.r-project.org/web/packages/lazyeval/index.html"
+ url = "https://cran.r-project.org/src/contrib/lazyeval_0.2.0.tar.gz"
+ list_url = "https://cran.r-project.org/src/contrib/Archive/lazyeval"
+
+ version('0.2.0', 'df1daac908dcf02ae7e12f4335b1b13b')
+
+ extends('R')
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)
diff --git a/var/spack/repos/builtin/packages/r-tibble/package.py b/var/spack/repos/builtin/packages/r-tibble/package.py
new file mode 100644
index 0000000000..837c3df603
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-tibble/package.py
@@ -0,0 +1,46 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RTibble(Package):
+ """Provides a 'tbl_df' class that offers better checking and printing
+ capabilities than traditional data frames."""
+
+ homepage = "https://github.com/hadley/tibble"
+ url = "https://cran.r-project.org/src/contrib/tibble_1.1.tar.gz"
+ list_url = "https://cran.r-project.org/src/contrib/Archive/tibble"
+
+ version('1.1', '2fe9f806109d0b7fadafb1ffafea4cb8')
+
+ extends('R')
+
+ depends_on('r-assertthat')
+ depends_on('r-lazyeval')
+ depends_on('r-rcpp')
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)