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| author | Justin Stanley <molecuul@users.noreply.github.com> | 2018-12-07 11:24:55 -0600 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2018-12-07 11:24:55 -0600 |
| commit | 76ab54caec803e55034b531401e277dfd51ffe80 (patch) | |
| tree | 37a08c3ef1bfd3dfe1ea54135b285ac6fd404c91 /var | |
| parent | d72ba01a7148aa5d393c1b6ea4faa37fae2612e8 (diff) | |
| download | spack-76ab54caec803e55034b531401e277dfd51ffe80.tar.gz spack-76ab54caec803e55034b531401e277dfd51ffe80.tar.bz2 spack-76ab54caec803e55034b531401e277dfd51ffe80.tar.xz spack-76ab54caec803e55034b531401e277dfd51ffe80.zip | |
r-sseq: new package at 1.20.0 (#10042)
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-sseq/package.py | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-sseq/package.py b/var/spack/repos/builtin/packages/r-sseq/package.py new file mode 100644 index 0000000000..2caf474019 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-sseq/package.py @@ -0,0 +1,20 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RSseq(RPackage): + """Shrinkage estimation of dispersion in Negative Binomial models for + RNA-seq experiments with small sample size""" + + homepage = "https://www.bioconductor.org/packages/sSeq/" + url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/sSeq_1.20.0.tar.gz" + + version('1.20.0', sha256='0fddcb238a6c401987843debe5b46dc03c22a1ee04df670f0d502e86a4f2144f') + + depends_on('r@3.0:', type=('build', 'run')) + depends_on('r-catools', type=('build', 'run')) + depends_on('r-rcolorbrewer', type=('build', 'run')) |