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| author | Justin S <3630356+codeandkey@users.noreply.github.com> | 2019-05-17 14:33:04 -0500 |
|---|---|---|
| committer | Levi Baber <baberlevi@gmail.com> | 2019-05-17 14:33:04 -0500 |
| commit | c00ed0d9428c99c388cfe332867e13e52dae8111 (patch) | |
| tree | d817171fb471903c46dab96310f18566f56b86bd /var | |
| parent | 7a459857e778f0d73cdb1c208c13a9cdc6ffed59 (diff) | |
| download | spack-c00ed0d9428c99c388cfe332867e13e52dae8111.tar.gz spack-c00ed0d9428c99c388cfe332867e13e52dae8111.tar.bz2 spack-c00ed0d9428c99c388cfe332867e13e52dae8111.tar.xz spack-c00ed0d9428c99c388cfe332867e13e52dae8111.zip | |
py-metasv: new package at 0.5.4 (#11476)
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/py-metasv/package.py | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-metasv/package.py b/var/spack/repos/builtin/packages/py-metasv/package.py new file mode 100644 index 0000000000..02681d704a --- /dev/null +++ b/var/spack/repos/builtin/packages/py-metasv/package.py @@ -0,0 +1,21 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyMetasv(PythonPackage): + """An accurate and integrative structural-variant caller for next + generation sequencing""" + + homepage = "http://bioinform.github.io/metasv/" + url = "https://github.com/bioinform/metasv/archive/0.5.4.tar.gz" + + version('0.5.4', sha256='c8613b56f44b9303b9e126618b2aee9dbc0b26c03d14e70e1aeed918582eeec1') + + depends_on('py-pybedtools@0.6.9', type=('build', 'run')) + depends_on('py-pysam', type=('build', 'run')) + depends_on('py-pyvcf', type=('build', 'run')) + depends_on('py-setuptools', type='build') |