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authorRobert Cohn <rscohn2@gmail.com>2021-04-07 12:31:08 -0400
committerGitHub <noreply@github.com>2021-04-07 10:31:08 -0600
commitc8b44142303471e8aa1bdcf9a6a30b9eff852322 (patch)
tree9dde2451316c2724c00083d7cbf9b1219c6eb403 /var
parent6c16f5c5d5634e25861355bd01687246b2315486 (diff)
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[oneapi] fix mkl deps, externally installed, and docs (#22607)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/intel-oneapi-compilers/package.py32
-rw-r--r--var/spack/repos/builtin/packages/intel-oneapi-mkl/package.py8
-rw-r--r--var/spack/repos/builtin/packages/intel-oneapi-mpi/package.py18
3 files changed, 27 insertions, 31 deletions
diff --git a/var/spack/repos/builtin/packages/intel-oneapi-compilers/package.py b/var/spack/repos/builtin/packages/intel-oneapi-compilers/package.py
index b8d3dedc78..7b12fa92f3 100644
--- a/var/spack/repos/builtin/packages/intel-oneapi-compilers/package.py
+++ b/var/spack/repos/builtin/packages/intel-oneapi-compilers/package.py
@@ -4,8 +4,8 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import glob
-import subprocess
from os import path
+import subprocess
from sys import platform
from spack import *
@@ -36,19 +36,16 @@ class IntelOneapiCompilers(IntelOneApiPackage):
def component_dir(self):
return 'compiler'
- def _join_prefix(self, p):
- return path.join(self.prefix, 'compiler', 'latest', 'linux', p)
-
def _ld_library_path(self):
dirs = ['lib',
- path.join('lib', 'x64'),
- path.join('lib', 'emu'),
- path.join('lib', 'oclfpga', 'host', 'linux64', 'lib'),
- path.join('lib', 'oclfpga', 'linux64', 'lib'),
- path.join('compiler', 'lib', 'intel64_lin'),
- path.join('compiler', 'lib')]
+ join_path('lib', 'x64'),
+ join_path('lib', 'emu'),
+ join_path('lib', 'oclfpga', 'host', 'linux64', 'lib'),
+ join_path('lib', 'oclfpga', 'linux64', 'lib'),
+ join_path('compiler', 'lib', 'intel64_lin'),
+ join_path('compiler', 'lib')]
for dir in dirs:
- yield self._join_prefix(dir)
+ yield join_path(self.component_path, 'linux', dir)
def install(self, spec, prefix):
# install cpp
@@ -60,22 +57,23 @@ class IntelOneapiCompilers(IntelOneApiPackage):
super(IntelOneapiCompilers, self).install(
spec,
prefix,
- installer_path=glob.glob(path.join('fortran-installer', '*'))[0])
+ installer_path=glob.glob(join_path('fortran-installer', '*'))[0])
# Some installers have a bug and do not return an error code when failing
- if not path.isfile(path.join(prefix, 'compiler', 'latest', 'linux',
+ if not path.isfile(join_path(self.component_path, 'linux',
'bin', 'intel64', 'ifort')):
raise RuntimeError('install failed')
# set rpath so 'spack compiler add' can check version strings
# without setting LD_LIBRARY_PATH
rpath = ':'.join(self._ld_library_path())
- patch_dirs = [path.join('compiler', 'lib', 'intel64_lin'),
- path.join('compiler', 'lib', 'intel64'),
+ patch_dirs = [join_path('compiler', 'lib', 'intel64_lin'),
+ join_path('compiler', 'lib', 'intel64'),
'bin']
for pd in patch_dirs:
- patchables = glob.glob(self._join_prefix(path.join(pd, '*')))
- patchables.append(self._join_prefix(path.join('lib', 'icx-lto.so')))
+ patchables = glob.glob(join_path(self.component_path, 'linux', pd, '*'))
+ patchables.append(join_path(self.component_path,
+ 'linux', 'lib', 'icx-lto.so'))
for file in patchables:
# Try to patch all files, patchelf will do nothing if
# file should not be patched
diff --git a/var/spack/repos/builtin/packages/intel-oneapi-mkl/package.py b/var/spack/repos/builtin/packages/intel-oneapi-mkl/package.py
index fff8432ccb..aee6a50677 100644
--- a/var/spack/repos/builtin/packages/intel-oneapi-mkl/package.py
+++ b/var/spack/repos/builtin/packages/intel-oneapi-mkl/package.py
@@ -36,6 +36,8 @@ class IntelOneapiMkl(IntelOneApiLibraryPackage):
@property
def libs(self):
- lib_path = '{0}/{1}/latest/lib/intel64'.format(self.prefix, self.component_dir)
- mkl_libs = ['libmkl_intel_ilp64', 'libmkl_sequential', 'libmkl_core']
- return find_libraries(mkl_libs, root=lib_path, shared=True, recursive=False)
+ lib_path = join_path(self.component_path, 'lib', 'intel64')
+ mkl_libs = ['libmkl_intel_lp64', 'libmkl_sequential', 'libmkl_core']
+ libs = find_libraries(mkl_libs, root=lib_path, shared=True, recursive=False)
+ libs += find_system_libraries(['libpthread', 'libm', 'libdl'], shared=True)
+ return libs
diff --git a/var/spack/repos/builtin/packages/intel-oneapi-mpi/package.py b/var/spack/repos/builtin/packages/intel-oneapi-mpi/package.py
index ae6d1fccbf..86eef9054e 100644
--- a/var/spack/repos/builtin/packages/intel-oneapi-mpi/package.py
+++ b/var/spack/repos/builtin/packages/intel-oneapi-mpi/package.py
@@ -4,7 +4,6 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-from os import path
import subprocess
from sys import platform
@@ -34,7 +33,7 @@ class IntelOneapiMpi(IntelOneApiLibraryPackage):
return 'mpi'
def setup_dependent_package(self, module, dep_spec):
- dir = join_path(self.prefix, 'mpi', 'latest', 'bin')
+ dir = join_path(self.component_path, 'bin')
self.spec.mpicc = join_path(dir, 'mpicc')
self.spec.mpicxx = join_path(dir, 'mpicxx')
self.spec.mpif77 = join_path(dir, 'mpif77')
@@ -48,7 +47,7 @@ class IntelOneapiMpi(IntelOneApiLibraryPackage):
env.set('MPICH_FC', spack_fc)
# Set compiler wrappers for dependent build stage
- dir = self._join_prefix('bin')
+ dir = join_path(self.component_path, 'bin')
env.set('MPICC', join_path(dir, 'mpicc'))
env.set('MPICXX', join_path(dir, 'mpicxx'))
env.set('MPIF77', join_path(dir, 'mpif77'))
@@ -58,22 +57,19 @@ class IntelOneapiMpi(IntelOneApiLibraryPackage):
@property
def libs(self):
libs = []
- for dir in [path.join('lib', 'release_mt'),
+ for dir in [join_path('lib', 'release_mt'),
'lib',
- path.join('libfabric', 'lib')]:
- lib_path = path.join(self.prefix, 'mpi', 'latest', dir)
+ join_path('libfabric', 'lib')]:
+ lib_path = join_path(self.component_path, dir)
ldir = find_libraries('*', root=lib_path, shared=True, recursive=False)
libs += ldir
return libs
- def _join_prefix(self, path):
- return join_path(self.prefix, 'mpi', 'latest', path)
-
def install(self, spec, prefix):
super(IntelOneapiMpi, self).install(spec, prefix)
# need to patch libmpi.so so it can always find libfabric
- libfabric_rpath = self._join_prefix(path.join('libfabric', 'lib'))
+ libfabric_rpath = join_path(self.component_path, 'libfabric', 'lib')
for lib_version in ['debug', 'release', 'release_mt', 'debug_mt']:
- file = self._join_prefix(path.join('lib', lib_version, 'libmpi.so'))
+ file = join_path(self.component_path, 'lib', lib_version, 'libmpi.so')
subprocess.call(['patchelf', '--set-rpath', libfabric_rpath, file])