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| author | Simon Flood <simonflood@users.noreply.github.com> | 2018-07-26 16:07:55 +0100 |
|---|---|---|
| committer | Adam J. Stewart <ajstewart426@gmail.com> | 2018-07-26 10:07:55 -0500 |
| commit | 80741bc4275cadb9b78bf64faead6d8f44424a85 (patch) | |
| tree | be346feaf27e455d68e3d8c2ff02fccb95bc4148 /var | |
| parent | 643a4fbb5995034a7ecdee6f35bd72376bf439e0 (diff) | |
| download | spack-80741bc4275cadb9b78bf64faead6d8f44424a85.tar.gz spack-80741bc4275cadb9b78bf64faead6d8f44424a85.tar.bz2 spack-80741bc4275cadb9b78bf64faead6d8f44424a85.tar.xz spack-80741bc4275cadb9b78bf64faead6d8f44424a85.zip | |
hmmer: added version 3.2.1 & updated URL (#8787)
Add HMMER 3.2.1 and updated URL then removed url_for_version function as no longer required - all HMMER downloads available from updated URL.
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/hmmer/package.py | 11 |
1 files changed, 2 insertions, 9 deletions
diff --git a/var/spack/repos/builtin/packages/hmmer/package.py b/var/spack/repos/builtin/packages/hmmer/package.py index e38dfc80bb..1eea95c75f 100644 --- a/var/spack/repos/builtin/packages/hmmer/package.py +++ b/var/spack/repos/builtin/packages/hmmer/package.py @@ -31,8 +31,9 @@ class Hmmer(Package): probabilistic models called profile hidden Markov models (profile HMMs). """ homepage = 'http://www.hmmer.org' - url = 'http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz' + url = 'http://eddylab.org/software/hmmer/hmmer-3.2.1.tar.gz' + version('3.2.1', '4e0ad5ed45462d4e36807d21e6d82b69') version('3.1b2', 'c8c141018bc0ccd7fc37b33f2b945d5f') version('3.0', '4cf685f3bc524ba5b5cdaaa070a83588') version('2.4i', 'dab234c87e026ac1de942450750acd20') @@ -45,14 +46,6 @@ class Hmmer(Package): depends_on('mpi', when='+mpi') depends_on('gsl', when='+gsl') - def url_for_version(self, version): - base_url = 'http://eddylab.org/software' - - if version >= Version('3.0'): - return '{0}/hmmer3/{1}/hmmer-{1}.tar.gz'.format(base_url, version) - else: - return '{0}/hmmer/{1}/hmmer-{1}.tar.gz'.format(base_url, version) - def install(self, spec, prefix): configure_args = [ '--prefix={0}'.format(prefix) |