diff options
| author | manifest <robqiao@users.noreply.github.com> | 2020-10-17 08:02:59 +1030 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2020-10-16 16:32:59 -0500 |
| commit | 89332361ba2a1c55ee3d0702ae517b10964535c9 (patch) | |
| tree | eebaf388934de93d1ed2ea2370f72549d005d68b /var | |
| parent | da71e9e88e8204012076a980feccdd46b27e0b00 (diff) | |
| download | spack-89332361ba2a1c55ee3d0702ae517b10964535c9.tar.gz spack-89332361ba2a1c55ee3d0702ae517b10964535c9.tar.bz2 spack-89332361ba2a1c55ee3d0702ae517b10964535c9.tar.xz spack-89332361ba2a1c55ee3d0702ae517b10964535c9.zip | |
gemini dep py-geneimpacts + (#19334)
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/py-geneimpacts/package.py | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-geneimpacts/package.py b/var/spack/repos/builtin/packages/py-geneimpacts/package.py new file mode 100644 index 0000000000..a5ef2fa91e --- /dev/null +++ b/var/spack/repos/builtin/packages/py-geneimpacts/package.py @@ -0,0 +1,21 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyGeneimpacts(PythonPackage): + """Given multiple snpEff or VEP or BCFTools consequence annotations + for a single variant, get an orderable python object for each annotation. + """ + + homepage = "https://github.com/brentp/geneimpacts" + url = "https://github.com/brentp/geneimpacts/archive/v0.3.7.tar.gz" + + version('0.3.7', sha256='895a0aa64935bf8528257fc5a3747c09adbf30c4885d95b0fa69ba4bb858c133') + version('0.3.6', sha256='7998e469e7c25b15ecb1d7a73620cc42f13ca91f3f49384513729c180e3a9b97') + + depends_on('python@2.7:2.8,3.4:', type=('build', 'run')) + depends_on('py-setuptools', type='build') |