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authorCyrus Harrison <cyrush@llnl.gov>2019-01-12 17:43:39 -0800
committerTodd Gamblin <tgamblin@llnl.gov>2019-01-12 17:43:39 -0800
commit9350db5665638a451cb23d33e441c3356f4a831f (patch)
tree65509134261e64ebf8aacdb962750fcab473a510 /var
parentdc6dca3c365ee566062f5589b57bab9a66112d7e (diff)
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update alpine ascent and friends (#10320)
This adds a lot of fixes and updates for alpine ascent and its dependencies: * add support for static (via ~shared) and use vtk-m 1.2 * update vtkh package to output cmake configure file and pinning it to vtkm 1.2 * make conduit respect ~python * fix ascent python logic * consistant cmake usage * conditionally add tbb in ascent if vtkh * enable openmp * more robust handling of variants * update ascent and conduit for static builds * add optional support for mfem in ascent * enable mfem conduit support for ascent * add optional adios dep to conduit * remove ver req from conduit * ascent: remove confusing comment * tweaks to conduit and ascent pkg recipes * fix typo in conduit package * pref conduit master * changing mfem to depend on conduit@master to get updated relay * restore use of conduit 0.3.1 or greater for mfem * set master as preferred conduit version * allow mfem to use conduit master * adding rover package and editing ascent * updating vtkm cmake dep * guard ascent python support on +shared * removing rover to simply ascent package * add fortran variant to conduit, to allow us to turn off conduit support even when a fortran compiler is specified * fix fortran compiler check so it can work on cray systems * working towards cuda fix for vtkm lagrange filter * update ascent package with more variants, and patch to avoid nvcc issue * hdf5 flags fix for BGQ * add post install test * add testing to ascent * add testing of the using-with-make example * add ctest output on error for run_tests
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/ascent/package.py168
-rw-r--r--var/spack/repos/builtin/packages/conduit/package.py146
-rw-r--r--var/spack/repos/builtin/packages/mfem/package.py2
-rw-r--r--var/spack/repos/builtin/packages/vtkh/package.py196
-rw-r--r--var/spack/repos/builtin/packages/vtkh/vtkm_lagrange_cuda_fix.patch16
-rw-r--r--var/spack/repos/builtin/packages/vtkm/package.py7
6 files changed, 465 insertions, 70 deletions
diff --git a/var/spack/repos/builtin/packages/ascent/package.py b/var/spack/repos/builtin/packages/ascent/package.py
index 1c3ada5c5e..60b02849ed 100644
--- a/var/spack/repos/builtin/packages/ascent/package.py
+++ b/var/spack/repos/builtin/packages/ascent/package.py
@@ -5,19 +5,27 @@
from spack import *
-import socket
+import sys
import os
+import socket
+import glob
+import shutil
import llnl.util.tty as tty
from os import environ as env
-def cmake_cache_entry(name, value):
+def cmake_cache_entry(name, value, vtype=None):
"""
Helper that creates CMake cache entry strings used in
'host-config' files.
"""
- return 'set({0} "{1}" CACHE PATH "")\n\n'.format(name, value)
+ if vtype is None:
+ if value == "ON" or value == "OFF":
+ vtype = "BOOL"
+ else:
+ vtype = "PATH"
+ return 'set({0} "{1}" CACHE {2} "")\n\n'.format(name, value, vtype)
class Ascent(Package):
@@ -30,30 +38,31 @@ class Ascent(Package):
maintainers = ['cyrush']
- version('develop', branch='develop', submodules=True)
+ version('develop',
+ branch='develop',
+ submodules=True)
###########################################################################
# package variants
###########################################################################
- variant("shared", default=True, description="Build Conduit as shared libs")
-
- variant("cmake", default=True,
- description="Build CMake (if off, attempt to use cmake from PATH)")
+ variant("shared", default=True, description="Build Ascent as shared libs")
+ variant('test', default=True, description='Enable Ascent unit tests')
variant("mpi", default=True, description="Build Ascent MPI Support")
- # variants for python support
- variant("python", default=True, description="Build Conduit Python support")
+ # variants for language support
+ variant("python", default=True, description="Build Ascent Python support")
+ variant("fortran", default=True, description="Build Ascent Fortran support")
# variants for runtime features
-
variant("vtkh", default=True,
description="Build VTK-h filter and rendering support")
- variant("tbb", default=True, description="Build tbb support")
+ variant("openmp", default=(sys.platform != 'darwin'),
+ description="build openmp support")
variant("cuda", default=False, description="Build cuda support")
-
+ variant("mfem", default=False, description="Build MFEM filter support")
variant("adios", default=False, description="Build Adios filter support")
# variants for dev-tools (docs, etc)
@@ -63,30 +72,48 @@ class Ascent(Package):
# package dependencies
###########################################################################
- depends_on("cmake", when="+cmake")
- depends_on("conduit@master")
+ depends_on("cmake@3.9.2:3.9.999", type='build')
+ depends_on("conduit~python", when="~python")
+ depends_on("conduit+python", when="+python+shared")
+ depends_on("conduit~shared~python", when="~shared")
#######################
# Python
#######################
# we need a shared version of python b/c linking with static python lib
# causes duplicate state issues when running compiled python modules.
- depends_on("python+shared")
- extends("python", when="+python")
- depends_on("py-numpy", when="+python", type=('build', 'run'))
+ depends_on("python+shared", when="+python+shared")
+ extends("python", when="+python+shared")
+ depends_on("py-numpy", when="+python+shared", type=('build', 'run'))
#######################
# MPI
#######################
depends_on("mpi", when="+mpi")
- depends_on("py-mpi4py", when="+python+mpi")
+ # use old version of mpi4py to avoid build issues with cython
+ depends_on("py-mpi4py@2.0.0:2.9.999", when="+mpi+python+shared")
#############################
# TPLs for Runtime Features
#############################
- depends_on("vtkh", when="+vtkh")
- depends_on("vtkh+cuda", when="+vtkh+cuda")
+ depends_on("vtkh@develop", when="+vtkh")
+ depends_on("vtkh@develop~openmp", when="+vtkh~openmp")
+ depends_on("vtkh@develop+cuda+openmp", when="+vtkh+cuda+openmp")
+ depends_on("vtkh@develop+cuda~openmp", when="+vtkh+cuda~openmp")
+
+ depends_on("vtkh@develop~shared", when="~shared+vtkh")
+ depends_on("vtkh@develop~shared~openmp", when="~shared+vtkh~openmp")
+ depends_on("vtkh@develop~shared+cuda", when="~shared+vtkh+cuda")
+ depends_on("vtkh@develop~shared+cuda~openmp", when="~shared+vtkh+cuda~openmp")
+
+ # mfem
+ depends_on("mfem+shared+mpi+conduit", when="+shared+mfem+mpi")
+ depends_on("mfem~shared+mpi+conduit", when="~shared+mfem+mpi")
+
+ depends_on("mfem+shared~mpi+conduit", when="+shared+mfem~mpi")
+ depends_on("mfem~shared~mpi+conduit", when="~shared+mfem~mpi")
+
depends_on("adios", when="+adios")
#######################
@@ -94,9 +121,12 @@ class Ascent(Package):
#######################
depends_on("py-sphinx", when="+python+doc", type='build')
+ def setup_environment(self, spack_env, run_env):
+ spack_env.set('CTEST_OUTPUT_ON_FAILURE', '1')
+
def install(self, spec, prefix):
"""
- Build and install Conduit.
+ Build and install Ascent.
"""
with working_dir('spack-build', create=True):
py_site_pkgs_dir = None
@@ -117,12 +147,59 @@ class Ascent(Package):
if arg.count("RPATH") == 0:
cmake_args.append(arg)
cmake_args.extend(["-C", host_cfg_fname, "../src"])
+ print("Configuring Ascent...")
cmake(*cmake_args)
+ print("Building Ascent...")
make()
+ # run unit tests if requested
+ if "+test" in spec and self.run_tests:
+ print("Running Ascent Unit Tests...")
+ make("test")
+ print("Installing Ascent...")
make("install")
# install copy of host config for provenance
install(host_cfg_fname, prefix)
+ @run_after('install')
+ @on_package_attributes(run_tests=True)
+ def check_install(self):
+ """
+ Checks the spack install of ascent using ascents's
+ using-with-cmake example
+ """
+ print("Checking Ascent installation...")
+ spec = self.spec
+ install_prefix = spec.prefix
+ example_src_dir = join_path(install_prefix,
+ "examples",
+ "ascent",
+ "using-with-cmake")
+ print("Checking using-with-cmake example...")
+ with working_dir("check-ascent-using-with-cmake-example",
+ create=True):
+ cmake_args = ["-DASCENT_DIR={0}".format(install_prefix),
+ "-DCONDUIT_DIR={0}".format(spec['conduit'].prefix),
+ "-DVTKM_DIR={0}".format(spec['vtkm'].prefix),
+ "-DVTKH_DIR={0}".format(spec['vtkh'].prefix),
+ example_src_dir]
+ cmake(*cmake_args)
+ make()
+ example = Executable('./ascent_render_example')
+ example()
+ print("Checking using-with-make example...")
+ example_src_dir = join_path(install_prefix,
+ "examples",
+ "ascent",
+ "using-with-make")
+ example_files = glob.glob(join_path(example_src_dir, "*"))
+ with working_dir("check-ascent-using-with-make-example",
+ create=True):
+ for example_file in example_files:
+ shutil.copy(example_file, ".")
+ make("ASCENT_DIR={0}".format(install_prefix))
+ example = Executable('./ascent_render_example')
+ example()
+
def create_host_config(self, spec, prefix, py_site_pkgs_dir=None):
"""
This method creates a 'host-config' file that specifies
@@ -151,8 +228,7 @@ class Ascent(Package):
if self.compiler.fc:
# even if this is set, it may not exist so do one more sanity check
- if os.path.isfile(env["SPACK_FC"]):
- f_compiler = env["SPACK_FC"]
+ f_compiler = which(env["SPACK_FC"])
#######################################################################
# By directly fetching the names of the actual compilers we appear
@@ -196,7 +272,6 @@ class Ascent(Package):
#######################
# Compiler Settings
#######################
-
cfg.write("#######\n")
cfg.write("# using %s compiler spec\n" % spec.compiler)
cfg.write("#######\n\n")
@@ -206,13 +281,28 @@ class Ascent(Package):
cfg.write(cmake_cache_entry("CMAKE_CXX_COMPILER", cpp_compiler))
cfg.write("# fortran compiler used by spack\n")
- if f_compiler is not None:
+ if "+fortran" in spec and f_compiler is not None:
cfg.write(cmake_cache_entry("ENABLE_FORTRAN", "ON"))
- cfg.write(cmake_cache_entry("CMAKE_Fortran_COMPILER", f_compiler))
+ cfg.write(cmake_cache_entry("CMAKE_Fortran_COMPILER",
+ f_compiler.path))
else:
cfg.write("# no fortran compiler found\n\n")
cfg.write(cmake_cache_entry("ENABLE_FORTRAN", "OFF"))
+ # shared vs static libs
+ if "+shared" in spec:
+ cfg.write(cmake_cache_entry("BUILD_SHARED_LIBS", "ON"))
+ else:
+ cfg.write(cmake_cache_entry("BUILD_SHARED_LIBS", "OFF"))
+
+ #######################
+ # Unit Tests
+ #######################
+ if "+test" in spec:
+ cfg.write(cmake_cache_entry("ENABLE_TESTS", "ON"))
+ else:
+ cfg.write(cmake_cache_entry("ENABLE_TESTS", "OFF"))
+
#######################################################################
# Core Dependencies
#######################################################################
@@ -234,7 +324,7 @@ class Ascent(Package):
cfg.write("# Python Support\n")
- if "+python" in spec:
+ if "+python" in spec and "+shared" in spec:
cfg.write("# Enable python module builds\n")
cfg.write(cmake_cache_entry("ENABLE_PYTHON", "ON"))
cfg.write("# python from spack \n")
@@ -247,7 +337,7 @@ class Ascent(Package):
else:
cfg.write(cmake_cache_entry("ENABLE_PYTHON", "OFF"))
- if "+doc" in spec:
+ if "+doc" in spec and "+python" in spec:
cfg.write(cmake_cache_entry("ENABLE_DOCS", "ON"))
cfg.write("# sphinx from spack \n")
@@ -294,25 +384,37 @@ class Ascent(Package):
else:
cfg.write(cmake_cache_entry("ENABLE_CUDA", "OFF"))
+ if "+openmp" in spec:
+ cfg.write(cmake_cache_entry("ENABLE_OPENMP", "ON"))
+ else:
+ cfg.write(cmake_cache_entry("ENABLE_OPENMP", "OFF"))
+
#######################
- # VTK-h
+ # VTK-h (and deps)
#######################
cfg.write("# vtk-h support \n")
if "+vtkh" in spec:
- cfg.write("# tbb from spack\n")
- cfg.write(cmake_cache_entry("TBB_DIR", spec['tbb'].prefix))
-
cfg.write("# vtk-m from spack\n")
cfg.write(cmake_cache_entry("VTKM_DIR", spec['vtkm'].prefix))
cfg.write("# vtk-h from spack\n")
cfg.write(cmake_cache_entry("VTKH_DIR", spec['vtkh'].prefix))
+
else:
cfg.write("# vtk-h not built by spack \n")
#######################
+ # MFEM
+ #######################
+ if "+mfem" in spec:
+ cfg.write("# mfem from spack \n")
+ cfg.write(cmake_cache_entry("MFEM_DIR", spec['mfem'].prefix))
+ else:
+ cfg.write("# mfem not built by spack \n")
+
+ #######################
# Adios
#######################
diff --git a/var/spack/repos/builtin/packages/conduit/package.py b/var/spack/repos/builtin/packages/conduit/package.py
index 5674a83b48..dd730d4f3d 100644
--- a/var/spack/repos/builtin/packages/conduit/package.py
+++ b/var/spack/repos/builtin/packages/conduit/package.py
@@ -7,17 +7,24 @@ from spack import *
import socket
import os
+import glob
+import shutil
import llnl.util.tty as tty
from os import environ as env
-def cmake_cache_entry(name, value):
+def cmake_cache_entry(name, value, vtype=None):
"""
Helper that creates CMake cache entry strings used in
'host-config' files.
"""
- return 'set({0} "{1}" CACHE PATH "")\n\n'.format(name, value)
+ if vtype is None:
+ if value == "ON" or value == "OFF":
+ vtype = "BOOL"
+ else:
+ vtype = "PATH"
+ return 'set({0} "{1}" CACHE {2} "")\n\n'.format(name, value, vtype)
class Conduit(Package):
@@ -30,7 +37,7 @@ class Conduit(Package):
url = "https://github.com/LLNL/conduit/releases/download/v0.3.0/conduit-v0.3.0-src-with-blt.tar.gz"
git = "https://github.com/LLNL/conduit.git"
- version('master', branch='master', submodules=True)
+ version('master', branch='master', submodules=True, preferred=True)
version('0.3.1', 'b98d1476199a46bde197220cd9cde042')
version('0.3.0', '6396f1d1ca16594d7c66d4535d4f898e')
# note: checksums on github automatic release source tars changed ~9/17
@@ -44,17 +51,17 @@ class Conduit(Package):
###########################################################################
variant("shared", default=True, description="Build Conduit as shared libs")
-
- variant("cmake", default=True,
- description="Build CMake (if off, attempt to use cmake from PATH)")
+ variant('test', default=True, description='Enable Conduit unit tests')
# variants for python support
variant("python", default=True, description="Build Conduit Python support")
+ variant("fortran", default=True, description="Build Conduit Fortran support")
# variants for comm and i/o
variant("mpi", default=True, description="Build Conduit MPI Support")
variant("hdf5", default=True, description="Build Conduit HDF5 support")
variant("silo", default=False, description="Build Conduit Silo support")
+ variant("adios", default=False, description="Build Conduit ADIOS support")
# variants for dev-tools (docs, etc)
variant("doc", default=False, description="Build Conduit's documentation")
@@ -70,7 +77,7 @@ class Conduit(Package):
# CMake
#######################
# cmake 3.8.2 or newer
- depends_on("cmake@3.8.2:", when="+cmake")
+ depends_on("cmake@3.8.2:", type='build')
#######################
# Python
@@ -97,6 +104,11 @@ class Conduit(Package):
depends_on("silo~fortran", when="+silo+shared")
depends_on("silo~shared~fortran", when="+silo~shared")
+ depends_on("adios+mpi~hdf5+shared", when="+adios+mpi+shared")
+ depends_on("adios+mpi~hdf5~shared~blosc", when="+adios+mpi~shared")
+ depends_on("adios~mpi~hdf5+shared", when="+adios~mpi+shared")
+ depends_on("adios~mpi~hdf5~shared~blosc", when="+adios~mpi~shared")
+
#######################
# MPI
#######################
@@ -108,6 +120,9 @@ class Conduit(Package):
depends_on("py-sphinx", when="+python+doc", type='build')
depends_on("doxygen", when="+doc+doxygen")
+ def setup_environment(self, spack_env, run_env):
+ spack_env.set('CTEST_OUTPUT_ON_FAILURE', '1')
+
def url_for_version(self, version):
"""
Provide proper url
@@ -148,12 +163,57 @@ class Conduit(Package):
if arg.count("RPATH") == 0:
cmake_args.append(arg)
cmake_args.extend(["-C", host_cfg_fname, "../src"])
+ print("Configuring Conduit...")
cmake(*cmake_args)
+ print("Building Conduit...")
make()
+ # run unit tests if requested
+ if "+test" in spec and self.run_tests:
+ print("Running Conduit Unit Tests...")
+ make("test")
+ print("Installing Conduit...")
make("install")
# install copy of host config for provenance
+ print("Installing Conduit CMake Host Config File...")
install(host_cfg_fname, prefix)
+ @run_after('install')
+ @on_package_attributes(run_tests=True)
+ def check_install(self):
+ """
+ Checks the spack install of conduit using conduit's
+ using-with-cmake example
+ """
+ print("Checking Conduit installation...")
+ spec = self.spec
+ install_prefix = spec.prefix
+ example_src_dir = join_path(install_prefix,
+ "examples",
+ "conduit",
+ "using-with-cmake")
+ print("Checking using-with-cmake example...")
+ with working_dir("check-conduit-using-with-cmake-example",
+ create=True):
+ cmake_args = ["-DCONDUIT_DIR={0}".format(install_prefix),
+ example_src_dir]
+ cmake(*cmake_args)
+ make()
+ example = Executable('./example')
+ example()
+ print("Checking using-with-make example...")
+ example_src_dir = join_path(install_prefix,
+ "examples",
+ "conduit",
+ "using-with-make")
+ example_files = glob.glob(join_path(example_src_dir, "*"))
+ with working_dir("check-conduit-using-with-make-example",
+ create=True):
+ for example_file in example_files:
+ shutil.copy(example_file, ".")
+ make("CONDUIT_DIR={0}".format(install_prefix))
+ example = Executable('./example')
+ example()
+
def create_host_config(self, spec, prefix, py_site_pkgs_dir=None):
"""
This method creates a 'host-config' file that specifies
@@ -182,8 +242,7 @@ class Conduit(Package):
if self.compiler.fc:
# even if this is set, it may not exist so do one more sanity check
- if os.path.isfile(env["SPACK_FC"]):
- f_compiler = env["SPACK_FC"]
+ f_compiler = which(env["SPACK_FC"])
#######################################################################
# By directly fetching the names of the actual compilers we appear
@@ -200,15 +259,7 @@ class Conduit(Package):
# Find and record what CMake is used
##############################################
- if "+cmake" in spec:
- cmake_exe = spec['cmake'].command.path
- else:
- cmake_exe = which("cmake")
- if cmake_exe is None:
- msg = 'failed to find CMake (and cmake variant is off)'
- raise RuntimeError(msg)
- cmake_exe = cmake_exe.path
-
+ cmake_exe = spec['cmake'].command.path
host_cfg_fname = "%s-%s-%s-conduit.cmake" % (socket.gethostname(),
sys_type,
spec.compiler)
@@ -237,20 +288,44 @@ class Conduit(Package):
cfg.write(cmake_cache_entry("CMAKE_CXX_COMPILER", cpp_compiler))
cfg.write("# fortran compiler used by spack\n")
- if f_compiler is not None:
+ if "+fortran" in spec and f_compiler is not None:
cfg.write(cmake_cache_entry("ENABLE_FORTRAN", "ON"))
- cfg.write(cmake_cache_entry("CMAKE_Fortran_COMPILER", f_compiler))
+ cfg.write(cmake_cache_entry("CMAKE_Fortran_COMPILER",
+ f_compiler.path))
else:
cfg.write("# no fortran compiler found\n\n")
cfg.write(cmake_cache_entry("ENABLE_FORTRAN", "OFF"))
+ if "+shared" in spec:
+ cfg.write(cmake_cache_entry("BUILD_SHARED_LIBS", "ON"))
+ else:
+ cfg.write(cmake_cache_entry("BUILD_SHARED_LIBS", "OFF"))
+
+ # extra fun for blueos
+ if 'blueos_3' in sys_type and "+fortran" in spec:
+ if 'xl@coral' in os.getenv('SPACK_COMPILER_SPEC', ""):
+ # Fix missing std linker flag in xlc compiler
+ cfg.write(cmake_cache_entry("BLT_FORTRAN_FLAGS",
+ "-WF,-C! -qxlf2003=polymorphic"))
+ # Conduit can't link C++ into fortran for this spec, but works
+ # fine in host code
+ cfg.write(cmake_cache_entry("ENABLE_TESTS", "OFF"))
+
+ #######################
+ # Unit Tests
+ #######################
+ if "+test" in spec:
+ cfg.write(cmake_cache_entry("ENABLE_TESTS", "ON"))
+ else:
+ cfg.write(cmake_cache_entry("ENABLE_TESTS", "OFF"))
+
#######################
# Python
#######################
cfg.write("# Python Support\n")
- if "+python" in spec:
+ if "+python" in spec and "+shared" in spec:
cfg.write("# Enable python module builds\n")
cfg.write(cmake_cache_entry("ENABLE_PYTHON", "ON"))
cfg.write("# python from spack \n")
@@ -264,12 +339,14 @@ class Conduit(Package):
cfg.write(cmake_cache_entry("ENABLE_PYTHON", "OFF"))
if "+doc" in spec:
- cfg.write(cmake_cache_entry("ENABLE_DOCS", "ON"))
+ if "+python" in spec:
+ cfg.write(cmake_cache_entry("ENABLE_DOCS", "ON"))
- cfg.write("# sphinx from spack \n")
- sphinx_build_exe = join_path(spec['py-sphinx'].prefix.bin,
- "sphinx-build")
- cfg.write(cmake_cache_entry("SPHINX_EXECUTABLE", sphinx_build_exe))
+ cfg.write("# sphinx from spack \n")
+ sphinx_build_exe = join_path(spec['py-sphinx'].prefix.bin,
+ "sphinx-build")
+ cfg.write(cmake_cache_entry("SPHINX_EXECUTABLE",
+ sphinx_build_exe))
if "+doxygen" in spec:
cfg.write("# doxygen from uberenv\n")
doxygen_exe = spec['doxygen'].command.path
@@ -317,6 +394,12 @@ class Conduit(Package):
if "+hdf5" in spec:
cfg.write(cmake_cache_entry("HDF5_DIR", spec['hdf5'].prefix))
+ # extra fun for BG/Q
+ if 'bgqos_0' in sys_type:
+ cfg.write(cmake_cache_entry('HDF5_C_LIBRARY_m',
+ '-lm', 'STRING'))
+ cfg.write(cmake_cache_entry('HDF5_C_LIBRARY_dl',
+ '-ldl', 'STRING'))
else:
cfg.write("# hdf5 not built by spack \n")
@@ -331,6 +414,17 @@ class Conduit(Package):
else:
cfg.write("# silo not built by spack \n")
+ #######################
+ # ADIOS
+ #######################
+
+ cfg.write("# ADIOS from spack \n")
+
+ if "+adios" in spec:
+ cfg.write(cmake_cache_entry("ADIOS_DIR", spec['adios'].prefix))
+ else:
+ cfg.write("# adios not built by spack \n")
+
cfg.write("##################################\n")
cfg.write("# end spack generated host-config\n")
cfg.write("##################################\n")
diff --git a/var/spack/repos/builtin/packages/mfem/package.py b/var/spack/repos/builtin/packages/mfem/package.py
index 6a9fac9b22..f471b37de0 100644
--- a/var/spack/repos/builtin/packages/mfem/package.py
+++ b/var/spack/repos/builtin/packages/mfem/package.py
@@ -178,7 +178,7 @@ class Mfem(Package):
depends_on('unwind', when='+libunwind')
depends_on('zlib', when='+gzstream')
depends_on('gnutls', when='+gnutls')
- depends_on('conduit@0.3.1:', when='+conduit')
+ depends_on('conduit@0.3.1:,master:', when='+conduit')
depends_on('conduit+mpi', when='+conduit+mpi')
patch('mfem_ppc_build.patch', when='@3.2:3.3.0 arch=ppc64le')
diff --git a/var/spack/repos/builtin/packages/vtkh/package.py b/var/spack/repos/builtin/packages/vtkh/package.py
index bd91b06e31..3d60ee9a50 100644
--- a/var/spack/repos/builtin/packages/vtkh/package.py
+++ b/var/spack/repos/builtin/packages/vtkh/package.py
@@ -5,7 +5,27 @@
from spack import *
+
+import sys
import os
+import socket
+
+
+import llnl.util.tty as tty
+from os import environ as env
+
+
+def cmake_cache_entry(name, value, vtype=None):
+ """
+ Helper that creates CMake cache entry strings used in
+ 'host-config' files.
+ """
+ if vtype is None:
+ if value == "ON" or value == "OFF":
+ vtype = "BOOL"
+ else:
+ vtype = "PATH"
+ return 'set({0} "{1}" CACHE {2} "")\n\n'.format(name, value, vtype)
class Vtkh(Package):
@@ -15,24 +35,42 @@ class Vtkh(Package):
homepage = "https://github.com/Alpine-DAV/vtk-h"
git = "https://github.com/Alpine-DAV/vtk-h.git"
-
- version('master', branch='master', submodules=True)
-
maintainers = ['cyrush']
+ version('develop', branch='develop', submodules=True)
+ version('0.1.0', branch='develop', tag='v0.1.0', submodules=True)
+
+ variant("shared", default=True, description="Build vtk-h as shared libs")
variant("mpi", default=True, description="build mpi support")
- variant("tbb", default=True, description="build tbb support")
+ variant("tbb", default=False, description="build tbb support")
variant("cuda", default=False, description="build cuda support")
+ variant("openmp", default=(sys.platform != 'darwin'),
+ description="build openmp support")
- depends_on("cmake")
+ depends_on("cmake@3.8.2:", type='build')
depends_on("mpi", when="+mpi")
- depends_on("tbb", when="+tbb")
+ depends_on("intel-tbb", when="@0.1.0+tbb")
depends_on("cuda", when="+cuda")
- depends_on("vtkm@master")
- depends_on("vtkm@master+tbb", when="+tbb")
- depends_on("vtkm@master+cuda", when="+cuda")
+ depends_on("vtkm@1.2.0", when="@0.1.0")
+ depends_on("vtkm@1.2.0+tbb", when="@0.1.0+tbb")
+ depends_on("vtkm@1.2.0+cuda", when="@0.1.0+cuda")
+ depends_on("vtkm@1.2.0~shared", when="@0.1.0~shared")
+
+ depends_on("vtkm@master~tbb+openmp", when="@develop+openmp")
+ depends_on("vtkm@master~tbb~openmp", when="@develop~openmp")
+
+ depends_on("vtkm@master+cuda~tbb+openmp", when="@develop+cuda+openmp")
+ depends_on("vtkm@master+cuda~tbb~openmp", when="@develop+cuda~openmp")
+
+ depends_on("vtkm@master~tbb+openmp~shared", when="@develop+openmp~shared")
+ depends_on("vtkm@master~tbb~openmp~shared", when="@develop~openmp~shared")
+
+ depends_on("vtkm@master+cuda~tbb+openmp~shared", when="@develop+cuda+openmp~shared")
+ depends_on("vtkm@master+cuda~tbb~openmp~shared", when="@develop+cuda~openmp~shared")
+
+ patch('vtkm_lagrange_cuda_fix.patch')
def install(self, spec, prefix):
with working_dir('spack-build', create=True):
@@ -40,6 +78,13 @@ class Vtkh(Package):
"-DVTKM_DIR={0}".format(spec["vtkm"].prefix),
"-DENABLE_TESTS=OFF",
"-DBUILD_TESTING=OFF"]
+
+ # shared vs static libs
+ if "+shared" in spec:
+ cmake_args.append('-DBUILD_SHARED_LIBS=ON')
+ else:
+ cmake_args.append('-DBUILD_SHARED_LIBS=OFF')
+
# mpi support
if "+mpi" in spec:
mpicc = spec['mpi'].mpicc
@@ -53,6 +98,10 @@ class Vtkh(Package):
if "+tbb" in spec:
cmake_args.append("-DTBB_DIR={0}".format(spec["tbb"].prefix))
+ # openmp support
+ if "+openmp" in spec:
+ cmake_args.append("-DENABLE_OPENMP=ON")
+
# cuda support
if "+cuda" in spec:
cmake_args.append("-DENABLE_CUDA=ON")
@@ -76,3 +125,132 @@ class Vtkh(Package):
else:
make()
make("install")
+
+ def create_host_config(self, spec, prefix, py_site_pkgs_dir=None):
+ """
+ This method creates a 'host-config' file that specifies
+ all of the options used to configure and build vtkh.
+ """
+
+ #######################
+ # Compiler Info
+ #######################
+ c_compiler = env["SPACK_CC"]
+ cpp_compiler = env["SPACK_CXX"]
+
+ #######################################################################
+ # By directly fetching the names of the actual compilers we appear
+ # to doing something evil here, but this is necessary to create a
+ # 'host config' file that works outside of the spack install env.
+ #######################################################################
+
+ sys_type = spec.architecture
+ # if on llnl systems, we can use the SYS_TYPE
+ if "SYS_TYPE" in env:
+ sys_type = env["SYS_TYPE"]
+
+ ##############################################
+ # Find and record what CMake is used
+ ##############################################
+
+ cmake_exe = spec['cmake'].command.path
+
+ host_cfg_fname = "%s-%s-%s-vtkh.cmake" % (socket.gethostname(),
+ sys_type,
+ spec.compiler)
+
+ cfg = open(host_cfg_fname, "w")
+ cfg.write("##################################\n")
+ cfg.write("# spack generated host-config\n")
+ cfg.write("##################################\n")
+ cfg.write("# {0}-{1}\n".format(sys_type, spec.compiler))
+ cfg.write("##################################\n\n")
+
+ # Include path to cmake for reference
+ cfg.write("# cmake from spack \n")
+ cfg.write("# cmake executable path: %s\n\n" % cmake_exe)
+
+ #######################
+ # Compiler Settings
+ #######################
+
+ cfg.write("#######\n")
+ cfg.write("# using %s compiler spec\n" % spec.compiler)
+ cfg.write("#######\n\n")
+ cfg.write("# c compiler used by spack\n")
+ cfg.write(cmake_cache_entry("CMAKE_C_COMPILER", c_compiler))
+ cfg.write("# cpp compiler used by spack\n")
+ cfg.write(cmake_cache_entry("CMAKE_CXX_COMPILER", cpp_compiler))
+
+ # shared vs static libs
+ if "+shared" in spec:
+ cfg.write(cmake_cache_entry("BUILD_SHARED_LIBS", "ON"))
+ else:
+ cfg.write(cmake_cache_entry("BUILD_SHARED_LIBS", "OFF"))
+
+ #######################################################################
+ # Core Dependencies
+ #######################################################################
+
+ #######################
+ # VTK-h (and deps)
+ #######################
+
+ cfg.write("# vtk-m support \n")
+
+ if "+openmp" in spec:
+ cfg.write("# enable openmp support\n")
+ cfg.write(cmake_cache_entry("ENABLE_OPENMP", "ON"))
+
+ cfg.write("# vtk-m from spack\n")
+ cfg.write(cmake_cache_entry("VTKM_DIR", spec['vtkm'].prefix))
+
+ #######################################################################
+ # Optional Dependencies
+ #######################################################################
+
+ #######################
+ # MPI
+ #######################
+
+ cfg.write("# MPI Support\n")
+
+ if "+mpi" in spec:
+ cfg.write(cmake_cache_entry("ENABLE_MPI", "ON"))
+ cfg.write(cmake_cache_entry("MPI_C_COMPILER", spec['mpi'].mpicc))
+ cfg.write(cmake_cache_entry("MPI_CXX_COMPILER",
+ spec['mpi'].mpicxx))
+ cfg.write(cmake_cache_entry("MPI_Fortran_COMPILER",
+ spec['mpi'].mpifc))
+ mpiexe_bin = join_path(spec['mpi'].prefix.bin, 'mpiexec')
+ if os.path.isfile(mpiexe_bin):
+ # starting with cmake 3.10, FindMPI expects MPIEXEC_EXECUTABLE
+ # vs the older versions which expect MPIEXEC
+ if self.spec["cmake"].satisfies('@3.10:'):
+ cfg.write(cmake_cache_entry("MPIEXEC_EXECUTABLE",
+ mpiexe_bin))
+ else:
+ cfg.write(cmake_cache_entry("MPIEXEC",
+ mpiexe_bin))
+ else:
+ cfg.write(cmake_cache_entry("ENABLE_MPI", "OFF"))
+
+ #######################
+ # CUDA
+ #######################
+
+ cfg.write("# CUDA Support\n")
+
+ if "+cuda" in spec:
+ cfg.write(cmake_cache_entry("ENABLE_CUDA", "ON"))
+ else:
+ cfg.write(cmake_cache_entry("ENABLE_CUDA", "OFF"))
+
+ cfg.write("##################################\n")
+ cfg.write("# end spack generated host-config\n")
+ cfg.write("##################################\n")
+ cfg.close()
+
+ host_cfg_fname = os.path.abspath(host_cfg_fname)
+ tty.info("spack generated conduit host-config file: " + host_cfg_fname)
+ return host_cfg_fname
diff --git a/var/spack/repos/builtin/packages/vtkh/vtkm_lagrange_cuda_fix.patch b/var/spack/repos/builtin/packages/vtkh/vtkm_lagrange_cuda_fix.patch
new file mode 100644
index 0000000000..2f90477e76
--- /dev/null
+++ b/var/spack/repos/builtin/packages/vtkh/vtkm_lagrange_cuda_fix.patch
@@ -0,0 +1,16 @@
+diff --git a/src/vtkh/filters/CMakeLists.txt b/src/vtkh/filters/CMakeLists.txt
+index 4a42d61..f586155 100644
+--- a/src/vtkh/filters/CMakeLists.txt
++++ b/src/vtkh/filters/CMakeLists.txt
+@@ -41,6 +41,11 @@ set(vtkh_filters_deps vtkh_core vtkh_utils )
+ if(CUDA_FOUND)
+ # triggers cuda compile
+ list(APPEND vtkh_filters_deps cuda)
++
++ if(CMAKE_CUDA_COMPILER_VERSION VERSION_LESS 10.0.0)
++ set(particle_cuda_src "${CMAKE_CURRENT_SOURCE_DIR}/Lagrangian.cpp")
++ set_source_files_properties(${particle_cuda_src} PROPERTIES COMPILE_FLAGS "-Xptxas --opt-level=0")
++ endif()
+ endif()
+
+
diff --git a/var/spack/repos/builtin/packages/vtkm/package.py b/var/spack/repos/builtin/packages/vtkm/package.py
index 2a59095dd9..eb23aa3a33 100644
--- a/var/spack/repos/builtin/packages/vtkm/package.py
+++ b/var/spack/repos/builtin/packages/vtkm/package.py
@@ -29,6 +29,7 @@ class Vtkm(CMakePackage, CudaPackage):
# can overwhelm compilers with too many symbols
variant('build_type', default='Release', description='CMake build type',
values=('Debug', 'Release', 'RelWithDebInfo', 'MinSizeRel'))
+ variant("shared", default=True, description="build shared libs")
variant("cuda", default=False, description="build cuda support")
variant("doubleprecision", default=True,
description='enable double precision')
@@ -51,7 +52,11 @@ class Vtkm(CMakePackage, CudaPackage):
with working_dir('spack-build', create=True):
options = ["../",
"-DVTKm_ENABLE_TESTING:BOOL=OFF"]
-
+ # shared vs static libs
+ if "+shared" in spec:
+ options.append('-DBUILD_SHARED_LIBS=ON')
+ else:
+ options.append('-DBUILD_SHARED_LIBS=OFF')
# cuda support
if "+cuda" in spec:
options.append("-DVTKm_ENABLE_CUDA:BOOL=ON")