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authorNicolas Richart <nicolas.richart@epfl.ch>2016-06-08 14:17:46 +0200
committerNicolas Richart <nicolas.richart@epfl.ch>2016-06-08 14:17:46 +0200
commite124c86a4fe515ed4497fafac4bd877e22e2e25a (patch)
tree4d30e95a50115037cecd05180db19b02dca0274c /var
parent30e8e77fb60b06535b49d54db62781299f555a8d (diff)
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Corrected the shared libraries and tests in mumps package
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/mumps/package.py92
1 files changed, 50 insertions, 42 deletions
diff --git a/var/spack/repos/builtin/packages/mumps/package.py b/var/spack/repos/builtin/packages/mumps/package.py
index 92c45c9b95..652c85a031 100644
--- a/var/spack/repos/builtin/packages/mumps/package.py
+++ b/var/spack/repos/builtin/packages/mumps/package.py
@@ -23,7 +23,11 @@
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
-import os, sys, glob
+import os
+import sys
+import glob
+import subprocess
+
class Mumps(Package):
"""MUMPS: a MUltifrontal Massively Parallel sparse direct Solver"""
@@ -54,6 +58,8 @@ class Mumps(Package):
depends_on('scalapack', when='+mpi')
depends_on('mpi', when='+mpi')
+ patch('mumps-shared.patch', when='+shared')
+
# this function is not a patch function because in case scalapack
# is needed it uses self.spec['scalapack'].fc_link set by the
# setup_dependent_environment in scalapck. This happen after patch
@@ -116,43 +122,39 @@ class Mumps(Package):
if '+mpi' in self.spec:
makefile_conf.extend(
- ["CC = %s" % join_path(self.spec['mpi'].prefix.bin, 'mpicc'),
- "FC = %s" % join_path(self.spec['mpi'].prefix.bin, 'mpif90'),
- "FL = %s" % join_path(self.spec['mpi'].prefix.bin, 'mpif90'),
+ ["CC = %s" % self.spec['mpi'].mpicc,
+ "FC = %s" % self.spec['mpi'].mpif90,
"SCALAP = %s" % self.spec['scalapack'].fc_link,
"MUMPS_TYPE = par"])
else:
makefile_conf.extend(
["CC = cc",
"FC = fc",
- "FL = fc",
"MUMPS_TYPE = seq"])
# TODO: change the value to the correct one according to the
# compiler possible values are -DAdd_, -DAdd__ and/or -DUPPER
- makefile_conf.append("CDEFS = -DAdd_")
+ makefile_conf.extend([
+ 'CDEFS = -DAdd_',
+ 'FL = $(FC)',
+ ])
if '+shared' in self.spec:
+ makefile_conf.append('SHLIBEXT = .%s' % dso_suffix)
if sys.platform == 'darwin':
- # Building dylibs with mpif90 causes segfaults on 10.8 and 10.10. Use gfortran. (Homebrew)
- makefile_conf.extend([
- 'LIBEXT=.dylib',
- 'AR=%s -dynamiclib -Wl,-install_name -Wl,%s/$(notdir $@) -undefined dynamic_lookup -o ' % (os.environ['FC'],prefix.lib),
- 'RANLIB=echo'
- ])
+ makefile_conf.append(
+ 'LDFLAGS = -dynamiclib -Wl,-install_name -Wl,{0}/$(notdir $@) {1}{0} -undefined dynamic_lookup'.format(prefix.lib, self.compiler.fc_rpath_arg)
+ )
else:
- makefile_conf.extend([
- 'LIBEXT=.so',
- 'AR=$(FL) -shared -Wl,-soname -Wl,%s/$(notdir $@) -o' % prefix.lib,
- 'RANLIB=echo'
- ])
- else:
- makefile_conf.extend([
- 'LIBEXT = .a',
- 'AR = ar vr',
- 'RANLIB = ranlib'
- ])
+ makefile_conf.append(
+ 'LDFLAGS = -shared {1}{0}'.format(prefix.lib, self.compiler.fc_rpath_arg)
+ )
+ makefile_conf.extend([
+ 'LIBEXT = .a',
+ 'AR = ar vr ',
+ 'RANLIB = ranlib'
+ ])
makefile_inc_template = join_path(os.path.dirname(self.module.__file__),
'Makefile.inc')
@@ -172,38 +174,44 @@ class Mumps(Package):
# the choice to compile ?examples is to have kind of a sanity
# check on the libraries generated.
if '+float' in spec:
- make_libs.append('sexamples')
+ make_libs.append('s')
if '+complex' in spec:
- make_libs.append('cexamples')
+ make_libs.append('c')
if '+double' in spec:
- make_libs.append('dexamples')
+ make_libs.append('d')
if '+complex' in spec:
- make_libs.append('zexamples')
+ make_libs.append('z')
self.write_makefile_inc()
- # Build fails in parallel
- make(*make_libs, parallel=False)
+ make('mumps_lib', parallel=False)
+ make(*make_libs)
install_tree('lib', prefix.lib)
install_tree('include', prefix.include)
if '~mpi' in spec:
- lib_dsuffix = '.dylib' if sys.platform == 'darwin' else '.so'
- lib_suffix = lib_dsuffix if '+shared' in spec else '.a'
- install('libseq/libmpiseq%s' % lib_suffix, prefix.lib)
- for f in glob.glob(join_path('libseq','*.h')):
- install(f, prefix.include)
+ install('libseq/libmpiseq.a', prefix.lib)
+ if '+shared' in spec:
+ install('libseq/libmpiseq.{0}'.format(dso_suffix), prefix.lib)
+ install('libseq/mpi.h', prefix.include)
+ install('libseq/mpif.h', prefix.include)
# FIXME: extend the tests to mpirun -np 2 (or alike) when build with MPI
# FIXME: use something like numdiff to compare blessed output with the current
+ # TODO: test the installed mumps and not the one in stage
+ for t in make_libs:
+ make('{0}examples'.format(t))
+
with working_dir('examples'):
- if '+float' in spec:
- os.system('./ssimpletest < input_simpletest_real')
- if '+complex' in spec:
- os.system('./csimpletest < input_simpletest_real')
- if '+double' in spec:
- os.system('./dsimpletest < input_simpletest_real')
- if '+complex' in spec:
- os.system('./zsimpletest < input_simpletest_cmplx')
+ for t in make_libs:
+ input_file = 'input_simpletest_{0}'.format(
+ 'real' if t in ['s', 'd'] else 'cmplx')
+ with open(input_file) as input:
+ test = './{0}simpletest'.format(t)
+ ret = subprocess.call(test,
+ stdin=input)
+ if ret is not 0:
+ raise RuntimeError(
+ 'The test {0} did not pass'.format(test))