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| author | Marcus Boden <mboden@gwdg.de> | 2021-07-20 12:16:47 +0000 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2021-07-20 05:16:47 -0700 |
| commit | 3408d22df8acfd934795c6805b995b8e65e89f49 (patch) | |
| tree | ddf592b2a11bfb3f5c111d0597cd73c913f4cbe1 /var | |
| parent | aa9f5601289a33e918cc6a1e157f9d6a2bf54a9d (diff) | |
| download | spack-3408d22df8acfd934795c6805b995b8e65e89f49.tar.gz spack-3408d22df8acfd934795c6805b995b8e65e89f49.tar.bz2 spack-3408d22df8acfd934795c6805b995b8e65e89f49.tar.xz spack-3408d22df8acfd934795c6805b995b8e65e89f49.zip | |
New package: Mash (#24833)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/mash/package.py | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/mash/package.py b/var/spack/repos/builtin/packages/mash/package.py new file mode 100644 index 0000000000..bebcdd69af --- /dev/null +++ b/var/spack/repos/builtin/packages/mash/package.py @@ -0,0 +1,34 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Mash(AutotoolsPackage): + """ + Fast genome and metagenome distance estimation using MinHash. + """ + + homepage = "http://mash.readthedocs.org/" + url = "https://github.com/marbl/Mash/archive/refs/tags/v2.3.tar.gz" + + maintainers = ['marcusboden'] + + version('2.3', sha256='f96cf7305e010012c3debed966ac83ceecac0351dbbfeaa6cd7ad7f068d87fe1') + + conflicts('%gcc@11:', msg='mash cannot be build with gcc >= 11') + + depends_on("autoconf", type='build') + depends_on("automake", type='build') + depends_on("libtool", type='build') + depends_on("m4", type='build') + depends_on("capnproto") + depends_on("gsl") + + def configure_args(self): + args = [] + args.append("--with-capnp=" + self.spec['capnproto'].prefix) + args.append("--with-gsl=" + self.spec['gsl'].prefix) + return args |