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authorGlenn Johnson <glenn-johnson@uiowa.edu>2021-04-20 04:26:47 -0500
committerGitHub <noreply@github.com>2021-04-20 11:26:47 +0200
commit7ed05b2e5e87476595538ac19078b9a068538937 (patch)
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r-illuminahumanmethylationepicmanifest: new package (#23102)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/r-illuminahumanmethylationepicmanifest/package.py19
1 files changed, 19 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-illuminahumanmethylationepicmanifest/package.py b/var/spack/repos/builtin/packages/r-illuminahumanmethylationepicmanifest/package.py
new file mode 100644
index 0000000000..a23c17ee12
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-illuminahumanmethylationepicmanifest/package.py
@@ -0,0 +1,19 @@
+# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class RIlluminahumanmethylationepicmanifest(RPackage):
+ """Manifest for Illumina's EPIC methylation arrays"""
+
+ homepage = "https://bitbucket.com/kasperdanielhansen/Illumina_EPIC"
+ url = "https://bioconductor.org/packages/release/data/annotation/src/contrib/IlluminaHumanMethylationEPICmanifest_0.3.0.tar.gz"
+ bioc = "IlluminaHumanMethylationEPICmanifest"
+
+ version('0.3.0', sha256='e39a69d98486cec981e97c56f45bbe47d2ccb5bbb66a1b16fa0685575493902a')
+
+ depends_on('r@3.2.0:', type=('build', 'run'))
+ depends_on('r-minfi', type=('build', 'run'))