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author | lingnanyuan <1297162327@qq.com> | 2017-11-08 15:02:12 -0600 |
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committer | Christoph Junghans <christoph.junghans@gmail.com> | 2017-11-08 14:02:12 -0700 |
commit | 04f32377b2d9eb6a9109d6eb8fd0dc362f05838b (patch) | |
tree | 76edfade235c94f89e3bbbcc7f30d71742d2a821 /var | |
parent | 3fcc911737fd51f2349059bc1bf3cc0729e311b2 (diff) | |
download | spack-04f32377b2d9eb6a9109d6eb8fd0dc362f05838b.tar.gz spack-04f32377b2d9eb6a9109d6eb8fd0dc362f05838b.tar.bz2 spack-04f32377b2d9eb6a9109d6eb8fd0dc362f05838b.tar.xz spack-04f32377b2d9eb6a9109d6eb8fd0dc362f05838b.zip |
r-rhtslib: Create new package. (#6164)
Diffstat (limited to 'var')
-rw-r--r-- | var/spack/repos/builtin/packages/r-rhtslib/package.py | 41 |
1 files changed, 41 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-rhtslib/package.py b/var/spack/repos/builtin/packages/r-rhtslib/package.py new file mode 100644 index 0000000000..4af0093830 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-rhtslib/package.py @@ -0,0 +1,41 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/spack/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RRhtslib(RPackage): + """This package provides version 1.1 of the 'HTSlib' C library + for high-throughput sequence analysis. The package is primarily + useful to developers of other R packages who wish to make use + of HTSlib. Motivation and instructions for use of this package + are in the vignette, vignette(package="Rhtslib", "Rhtslib").""" + + homepage = "https://www.bioconductor.org/packages/Rhtslib/" + url = "https://git.bioconductor.org/packages/Rhtslib" + + version('1.8.0', git='https://git.bioconductor.org/packages/Rhtslib', commit='3b5493473bed42958614091c58c739932ffcfa79') + + depends_on('r@3.4.0:3.4.9', when='@1.8.0') + depends_on('r-zlibbioc', type=('build', 'run')) |