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authorsnehring <snehring@users.noreply.github.com>2021-06-25 15:12:01 -0500
committerGitHub <noreply@github.com>2021-06-25 22:12:01 +0200
commitcf0b3632fffe090fccafe6d2c5a83641e8796e26 (patch)
tree6fc1daac3ba3bc86f75ba452ffdd006e84480d0e /var
parent6b852bc1709804bb48285306fe3df62d0e4bc83a (diff)
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bwa: fixing build errors with gcc10+ (#24475)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/bwa/package.py5
1 files changed, 5 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/bwa/package.py b/var/spack/repos/builtin/packages/bwa/package.py
index 65a3ae7bc8..6758825f4c 100644
--- a/var/spack/repos/builtin/packages/bwa/package.py
+++ b/var/spack/repos/builtin/packages/bwa/package.py
@@ -38,6 +38,11 @@ class Bwa(Package):
'Makefile')
# use spack C compiler
filter_file('^CC=.*', 'CC={0}'.format(spack_cc), 'Makefile')
+ # fix gcc 10+ errors
+ if self.spec.satisfies('%gcc@10:'):
+ filter_file('const uint8_t rle_auxtab[8]',
+ 'extern const uint8_t rle_auxtab[8]',
+ 'rle.h', string=True)
make()
mkdirp(prefix.bin)