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| author | Justin S <3630356+codeandkey@users.noreply.github.com> | 2020-07-21 21:29:18 -0500 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2020-07-21 19:29:18 -0700 |
| commit | dedadcd2ea20848092b67eb6f5cb617b6f03a673 (patch) | |
| tree | 5a32409def6b1ec6f5c0be9a621422b0629bba12 /var | |
| parent | 983aeea8507f455b82cb3e5b41665a815b97306f (diff) | |
| download | spack-dedadcd2ea20848092b67eb6f5cb617b6f03a673.tar.gz spack-dedadcd2ea20848092b67eb6f5cb617b6f03a673.tar.bz2 spack-dedadcd2ea20848092b67eb6f5cb617b6f03a673.tar.xz spack-dedadcd2ea20848092b67eb6f5cb617b6f03a673.zip | |
hisat2 (package): add version 2.2.0, update homepage (#17600)
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/hisat2/package.py | 9 |
1 files changed, 7 insertions, 2 deletions
diff --git a/var/spack/repos/builtin/packages/hisat2/package.py b/var/spack/repos/builtin/packages/hisat2/package.py index 93b54e9ed5..ab03df4ce5 100644 --- a/var/spack/repos/builtin/packages/hisat2/package.py +++ b/var/spack/repos/builtin/packages/hisat2/package.py @@ -14,13 +14,18 @@ class Hisat2(MakefilePackage): exome sequencing data) against the general human population (as well as against a single reference genome).""" - homepage = "http://ccb.jhu.edu/software/hisat2" + homepage = "https://daehwankimlab.github.io/hisat2/" url = "ftp://ftp.ccb.jhu.edu/pub/infphilo/hisat2/downloads/hisat2-2.1.0-source.zip" + version('2.2.0', sha256='0dd55168853b82c1b085f79ed793dd029db163773f52272d7eb51b3b5e4a4cdd', + url='https://cloud.biohpc.swmed.edu/index.php/s/hisat2-220-source/download', + extension='zip') version('2.1.0', sha256='89a276eed1fc07414b1601947bc9466bdeb50e8f148ad42074186fe39a1ee781') def install(self, spec, prefix): - install_tree('doc', prefix.doc) + if spec.satisfies('@:2.1.0'): + install_tree('doc', prefix.doc) + install_tree('example', prefix.example) install_tree('hisatgenotype_modules', prefix.hisatgenotype_modules) install_tree('hisatgenotype_scripts', prefix.hisatgenotype_scripts) |