diff options
| author | George Young <A-N-Other@users.noreply.github.com> | 2023-09-11 15:13:49 +0100 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2023-09-11 16:13:49 +0200 |
| commit | 33cde877754051e2088b319875c670bfedc16c7b (patch) | |
| tree | cc278abbeb227f8cbb3b1d6498595b20c8f42507 /var | |
| parent | e63597bf792daf0eec00d7c2ac3cc9299c0edb4e (diff) | |
| download | spack-33cde877754051e2088b319875c670bfedc16c7b.tar.gz spack-33cde877754051e2088b319875c670bfedc16c7b.tar.bz2 spack-33cde877754051e2088b319875c670bfedc16c7b.tar.xz spack-33cde877754051e2088b319875c670bfedc16c7b.zip | |
gffcompare: new package @0.12.6 (#39917)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/gffcompare/package.py | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/gffcompare/package.py b/var/spack/repos/builtin/packages/gffcompare/package.py new file mode 100644 index 0000000000..7f1dda5318 --- /dev/null +++ b/var/spack/repos/builtin/packages/gffcompare/package.py @@ -0,0 +1,26 @@ +# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Gffcompare(MakefilePackage): + """gffcompare: classify, merge, tracking and annotation of GFF files by comparing to a + reference annotation GFF""" + + homepage = "https://ccb.jhu.edu/software/stringtie/gffcompare.shtml" + url = ( + "https://github.com/gpertea/gffcompare/releases/download/v0.12.6/gffcompare-0.12.6.tar.gz" + ) + + version("0.12.6", sha256="0e713bc9177d874c935802d11669776da5e9377a8c4d031153b48a783d3391d0") + + def build(self, spec, prefix): + make("release") + + def install(self, spec, prefix): + mkdir(prefix.bin) + install("gffcompare", prefix.bin) + install("trmap", prefix.bin) |