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author | 健美猞猁 <weijianwen@gmail.com> | 2018-09-05 03:35:33 +0800 |
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committer | Adam J. Stewart <ajstewart426@gmail.com> | 2018-09-04 14:35:33 -0500 |
commit | 9fe7000dda636cefb4c8f0424b844aa214c41216 (patch) | |
tree | 8327b73d5377f42c1d9244ff581f9418ee4b479c /var | |
parent | 5737155dd0de1adc51bd2a758761dacac6fbf387 (diff) | |
download | spack-9fe7000dda636cefb4c8f0424b844aa214c41216.tar.gz spack-9fe7000dda636cefb4c8f0424b844aa214c41216.tar.bz2 spack-9fe7000dda636cefb4c8f0424b844aa214c41216.tar.xz spack-9fe7000dda636cefb4c8f0424b844aa214c41216.zip |
Bamdst: a new package. (#9113)
* Bamdst: a new package.
* Remove duplicate make() in install().
Diffstat (limited to 'var')
-rw-r--r-- | var/spack/repos/builtin/packages/bamdst/package.py | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/bamdst/package.py b/var/spack/repos/builtin/packages/bamdst/package.py new file mode 100644 index 0000000000..230c8edb57 --- /dev/null +++ b/var/spack/repos/builtin/packages/bamdst/package.py @@ -0,0 +1,46 @@ +############################################################################## +# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/spack/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Bamdst(MakefilePackage): + "Bamdst is a a lightweight bam file depth statistical tool." + + homepage = "https://github.com/shiquan/bamdst" + git = "https://github.com/shiquan/bamdst.git" + + version('master', git='https://github.com/shiquan/bamdst.git') + + depends_on('zlib') + + parallel = False + + def edit(self, spec, prefix): + makefile = FileFilter('Makefile') + makefile.filter('CC= .*', 'CC = cc') + + def install(self, spec, prefix): + mkdir(prefix.bin) + install('bamdst', prefix.bin) |