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authorTodd Gamblin <tgamblin@llnl.gov>2016-07-31 22:14:40 -0700
committerGitHub <noreply@github.com>2016-07-31 22:14:40 -0700
commit7185fe2876bb3cbd3effb0d1d6fe2b94074e5c09 (patch)
treefe510f876f07411cdf46b2dd07bfb601c2a2d062 /var
parent0724eba9355f7c754a85032005b20ee7de76490a (diff)
parentbe2f2e42db66e67f09a744fbd152f2c0b21bb9b6 (diff)
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Merge pull request #1403 from glennpj/r-e1071
New package - r-e1071
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/r-class/package.py44
-rw-r--r--var/spack/repos/builtin/packages/r-e1071/package.py45
2 files changed, 89 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-class/package.py b/var/spack/repos/builtin/packages/r-class/package.py
new file mode 100644
index 0000000000..f541ea3611
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-class/package.py
@@ -0,0 +1,44 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RClass(Package):
+ """Various functions for classification, including k-nearest neighbour,
+ Learning Vector Quantization and Self-Organizing Maps."""
+
+ homepage = "http://www.stats.ox.ac.uk/pub/MASS4/"
+ url = "https://cran.r-project.org/src/contrib/class_7.3-14.tar.gz"
+ list_url = "https://cran.r-project.org/src/contrib/Archive/class"
+
+ version('7.3-14', '6a21dd206fe4ea29c55faeb65fb2b71e')
+
+ extends('R')
+
+ depends_on('r-mass', type=nolink)
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)
diff --git a/var/spack/repos/builtin/packages/r-e1071/package.py b/var/spack/repos/builtin/packages/r-e1071/package.py
new file mode 100644
index 0000000000..c2e7166403
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-e1071/package.py
@@ -0,0 +1,45 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RE1071(Package):
+ """Functions for latent class analysis, short time Fourier transform, fuzzy
+ clustering, support vector machines, shortest path computation, bagged
+ clustering, naive Bayes classifier, ..."""
+
+ homepage = "https://cran.r-project.org/package=e1071"
+ url = "https://cran.r-project.org/src/contrib/e1071_1.6-7.tar.gz"
+ list_url = "https://cran.r-project.org/src/contrib/Archive/e1071"
+
+ version('1.6-7', 'd109a7e3dd0c905d420e327a9a921f5a')
+
+ extends('R')
+
+ depends_on('r-class', type=nolink)
+
+ def install(self, spec, prefix):
+ R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir),
+ self.stage.source_path)