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authorEric <erimar77@users.noreply.github.com>2018-02-28 19:41:22 -0600
committerscheibelp <scheibel1@llnl.gov>2018-02-28 17:41:22 -0800
commitda2d6cccd68d7ca0772c4a0d321ecaada431762e (patch)
treebb52110941d72c17ace44346542ee3a755234bfc /var
parentd3ed46e9585f17c6eef3b3b38344d7492cc92f8e (diff)
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new package: py-goatools (#7328)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/py-goatools/package.py45
1 files changed, 45 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-goatools/package.py b/var/spack/repos/builtin/packages/py-goatools/package.py
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index 0000000000..921ad82279
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+++ b/var/spack/repos/builtin/packages/py-goatools/package.py
@@ -0,0 +1,45 @@
+##############################################################################
+# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/spack/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class PyGoatools(PythonPackage):
+ """Python scripts to find enrichment of GO terms"""
+
+ homepage = "https://github.com/tanghaibao/goatools"
+ url = "https://pypi.io/packages/source/g/goatools/goatools-0.7.11.tar.gz"
+
+ version('0.7.11', 'f2ab989ec9c4acdd80504b263c3b3188')
+
+ depends_on('py-nose', type=('build', 'run'))
+ depends_on('py-numpy', type=('build', 'run'))
+ depends_on('py-pandas', type=('build', 'run'))
+ depends_on('py-pydot', type=('build', 'run'))
+ depends_on('py-pyparsing', type=('build', 'run'))
+ depends_on('py-pytest', type=('build', 'run'))
+ depends_on('py-scipy', type=('build', 'run'))
+ depends_on('py-statsmodels', type=('build', 'run'))
+ depends_on('py-xlrd', type=('build', 'run'))
+ depends_on('py-xlsxwriter', type=('build', 'run'))